SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13116  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000383
Annotation
putative_odorant_response_protein_ODR-4_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.63 PlasmaMembrane   Reliability : 1.262
 

Sequence

CDS
ATGCCCAGAACAGTGTATTCACCCGAGCACTGCCTTCAATATTTGGAACAATATGCCTCCAAAGAAATATTTGCTATAGGGCTAATCCTCGGTCAGATGACCGATGCTAGAGAGAATGTAATCCATCTGGCTCGCACACCAGAAGAAAAAGGATCAGAGATTGGTATAGAATCAAATTATGGCCTAGATAAATCAGAGATAGCAAAGAATTTAAGTAGTGTATCTGAAGCATGGATTGCTGACCATGCGCGACATGTAACTAGAATGCTCCCTGGTGGAATGTTTGTTCAAGGCATATTTGTAACTAGCGATGAAGATGTCTTTGAAGATCCTAATTGCTTTAGTAAATTACGATCAACCCTTAACCACATATATAAAGGCTTAAGTATCAATGAGTATATGTTTGGAAACTGTCCTTACTCTAATGAAAGGCTGATCCTTCACATGTCTACAAGTACTAAAGTACTTACATGCAAAAGCTTAGAAGTCGGAGGTTTGAATAAAAACACAACTTTAAAACCTGTTGAATGGAAATTTTCACCTAAAGCATTGAGTTGGCAAAGGCTGGACTGCTATTATGAGTTTGATGAAATTTATCCTGTTATTGTTAAGAACAGTGGTGTCTCAGTAAAGAATCAATTTCAGCAAATTCTGGAGTCTGCACACAAAATAATTGAATCAAGTGTGATGTTTATTGATGGTGAGCTGAAAGATGGTTCAGAATCATTGGATCAACTCATAAAGAAGAAGAAAACTAAAACAAATACTAAATTGACACAGAATGAAGCACCAAAATCTATGCATGTTTCACTATTTGTACCTTATGAAAACACGCTTCCTGAAACAGTCGAGTATTTAGAATGCGAAGGCAGCATACATTTTAGCGGTGTAGTATCGTCAAGCGTTTTTATATACCCAAAGGCGACAGTAAAAGAGGCGATCGCCGCAGTCAAGCAAGATATTGTTCGTTCACTTGCTTCAAGATTCACAATGCATTGTGATGCATTAATTGATGACAACCTTCTCCCGGAAGAAAAGATTTGTTTCAATGAGCCGCCACGCCGGGTGTTAGTTCCAGTGGGATCCCTTTATCTCTGTGATTACTTATTCCCTGGAGAAGCACCGGCCGAAGCTTTACTTTCTGTTCGGGAACTATTGGATCTAAAAATAACAGAAACTGATGTTATATGCGATGTTGAAACACCTGCAGATACTTCCGAGTTTGACGCCCTAGATCGAGATGCAAGTAGTGAGGAATTGTTGGCAACGCCACAGGAAGCGAGCCAGTTCATGTATATTACGGGACTTTGTTTTGCCATGCTCGTACTCCTTGTTTCTATTATAATTCATTATTACGATGGTATAATTCAAGTGTTGAGTAAAATCTTTCCTAAATCCTGA
Protein
MPRTVYSPEHCLQYLEQYASKEIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESNYGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLEVGGLNKNTTLKPVEWKFSPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKNQFQQILESAHKIIESSVMFIDGELKDGSESLDQLIKKKKTKTNTKLTQNEAPKSMHVSLFVPYENTLPETVEYLECEGSIHFSGVVSSSVFIYPKATVKEAIAAVKQDIVRSLASRFTMHCDALIDDNLLPEEKICFNEPPRRVLVPVGSLYLCDYLFPGEAPAEALLSVRELLDLKITETDVICDVETPADTSEFDALDRDASSEELLATPQEASQFMYITGLCFAMLVLLVSIIIHYYDGIIQVLSKIFPKS

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
ODYU01001290    SOQ37299.1    RSAL01000111    RVE47078.1    NWSH01004177    PCG65399.1    + More
GDQN01003176    JAT87878.1    AGBW02009593    OWR50364.1    KQ459586    KPI97879.1    GAIX01003438    JAA89122.1    KQ460883    KPJ11406.1    JTDY01001802    KOB72846.1    PYGN01000143    PSN52959.1    NEVH01025672    PNF15033.1    KK853097    KDR11437.1    GEZM01043736    GEZM01043735    GEZM01043734    JAV78872.1    KQ434786    KZC05038.1    PNF15035.1    GL764479    EFZ17578.1    KQ414755    KOC61793.1    KQ980612    KYN15149.1    KQ976413    KYM90373.1    ADTU01010371    KQ982779    KYQ50735.1    KQ971343    EFA04456.1    GL888565    EGI59496.1    GL437711    EFN70033.1    KZ288263    PBC30329.1    GBYB01006421    JAG76188.1    KQ435727    KOX78020.1    GL448819    EFN83762.1    GEDC01019788    JAS17510.1    KK107320    EZA52781.1    GEDC01030197    JAS07101.1    AAZX01000028    QOIP01000009    RLU18949.1    NNAY01002333    OXU21526.1    GEBQ01029729    JAT10248.1    KQ981954    KYN32255.1    LBMM01010792    KMQ87230.1    KB631695    ERL85423.1    BT126607    AEE61571.1    APGK01051520    KB741190    ENN73037.1    KM527951    AKF17721.1    GEDC01025556    JAS11742.1    AAAB01008960    EAA11269.4    APCN01000054    DS231919    EDS26328.1    CH477224    EAT47167.1    GFTR01006382    JAW10044.1    GFDL01010651    JAV24394.1    GBBI01005004    JAC13708.1    GDAI01001102    JAI16501.1    DS235021    EEB10590.1    GECL01002955    JAP03169.1    GECU01032951    JAS74755.1    GBGD01001421    JAC87468.1    GAPW01001886    JAC11712.1    GDKW01000226    JAI56369.1    JXUM01062578    KQ562206    KXJ76417.1    AXCM01001908    GDRN01036627    JAI67334.1    AXCN02000964    PZQS01000011    PVD21934.1    GL732719    EFX66031.1    GDIQ01102502    JAL49224.1    GDIQ01253559    JAJ98165.1    GEFM01005960    JAP69836.1    LRGB01000512    KZS18509.1    ABJB010584201    ABJB011026942    DS656359    EEC02795.1    GDIQ01094742    JAL56984.1    GDIQ01257067    JAJ94657.1    GGLE01002685    MBY06811.1    GAKP01006179    JAC52773.1    GACK01003425    JAA61609.1    GDIP01244306    JAI79095.1    GFPF01005454    MAA16600.1    GGFJ01005392    MBW54533.1    GDIQ01157878    JAK93847.1    KA647164    AFP61793.1    JRES01000951    KNC26862.1   
Pfam
PF14778   ODR4-like        + More
PF00168   C2
PF00089   Trypsin
Interpro
IPR029454   ODR-4-like        + More
IPR035892   C2_domain_sf       
IPR000008   C2_dom       
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
IPR033116   TRYPSIN_SER       
IPR000884   TSP1_rpt       
SUPFAM
SSF50494   SSF50494       
Gene 3D

Ontologies

Topology

Length:
466
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.59879
Exp number, first 60 AAs:
0.00542
Total prob of N-in:
0.02132
outside
1  -  429
TMhelix
430  -  452
inside
453  -  466
 
 

Population Genetic Test Statistics

Pi
269.589227
Theta
212.854921
Tajima's D
1.97867
CLR
0.227974
CSRT
0.88075596220189
Interpretation
Uncertain
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