SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13112
Pre Gene Modal
BGIBMGA000385
Annotation
PREDICTED:_elastase-1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.15
 

Sequence

CDS
ATGTGGATACGACCTGCAATCATTTTAAATTTAATCACCATCGAATTTTCTTTAACTAATTATATAGAAAACGATCCGATATCGACCGAGGGGCATGCGAATTTATTTGACATGAAAACATCTAAAAAGTATCAAAATATTAGATTGATGGAACCAAAAAAAGGAATTCATTTAAATCGACCTTCATATTCGCCGTGGACTCGATGGAGTGTATGCCAAGAAGGTCGTAAGACCCGGAGGCGACATTGTGTACTTAAAAGAGTGTGTGGGGACTCCTTACGCGTTCAAGTTTCAAGATGTAGACAACGCAACAGGGGTCGAAAGAAGATGACACAAAACACAAAGTTCGGAAATTACATGATTATACCTCAAAGACGTCAGTTAGATTCCGAAGATGTGCAGAAACGATTCCGTGGATTCTCGCAGTGGAGCTCATGGACTAATTGTTCTCGCAAATGTACAACTGTAAGAAGAAGGCGATGCATGAAACGGTCAATTTGCGGTCGTAAAATTGTAAAGCACTCGGCGTACTGCTATTTGGAAGGGAGTTTCTGTCACACGTGGATACGAAACAGAATGCAGAAGCGGCAGGACCCAGGGCGTGCAGTATTACAAGCCATGCCTCCACCGGCTCCGGCGATACATCACGAAGATTACCGAATGGCTCCGACTGCCCACTCCTGTGGTCGACTAGGACGGTATCGAGGCTCTGTAGCCGCGAGGTACAGGGGACGTATGAGAGACATGATCCGGATCATCGGAGGAAGGCCGGCGCCGCCTGGTAAATGGCCGTGGCAGGTTGCCGTTCTAAATCGATTTAAGGAGGCGTTTTGTGGCGGGACCCTCGTTTCGCTTCGCTGGGTGGTGACAGCAGCTCATTGCGTGCGGCGACGGCTTTACGTGCGCTTGGGTGAGCACGACCTGCTCCTGCGGAACTACGGGGAACTGGAGATGAAGGTCACCGAAGCAGTCGTACATCCTCGATACGACCCTGACACGGTCATCAACGATGTCGCCATGCTCCGATTACCGACGTCCGCCCGCCCCGACCTTGGTCACGGGATAGCTTGCCTTCCGAATCCACACCAGTCTCTCCCTCCGCATACATCCTGCATAATACTCGGGTGGGGTAAGAAGCGGCCCACAGATGTCCACGGTACGAGGGTGTTGCACGAAGCGCAGGTTTCGACAATACAGCAAGGCGTATGTCGTCGCTCGTACTGGCAATACGCCATCACAGACGACATGGTGTGTGCGGGACGCGGGCGGCGTGATTCGTGCGCAGGGGACTCCGGCGGACCGCTGCTTTGTCGGGACCGCTCCAATAGATACGTCTTACAGGGCATTACCAGTTTCGGAGACGGATGCGGGAAGCGTGGGAAGTACGGCATATACACGAGAACTGCTGGTTACGTCACTTGGATTAAAGACGTAATGAATAGCAAATACTTCGATTGA
Protein
MWIRPAIILNLITIEFSLTNYIENDPISTEGHANLFDMKTSKKYQNIRLMEPKKGIHLNRPSYSPWTRWSVCQEGRKTRRRHCVLKRVCGDSLRVQVSRCRQRNRGRKKMTQNTKFGNYMIIPQRRQLDSEDVQKRFRGFSQWSSWTNCSRKCTTVRRRRCMKRSICGRKIVKHSAYCYLEGSFCHTWIRNRMQKRQDPGRAVLQAMPPPAPAIHHEDYRMAPTAHSCGRLGRYRGSVAARYRGRMRDMIRIIGGRPAPPGKWPWQVAVLNRFKEAFCGGTLVSLRWVVTAAHCVRRRLYVRLGEHDLLLRNYGELEMKVTEAVVHPRYDPDTVINDVAMLRLPTSARPDLGHGIACLPNPHQSLPPHTSCIILGWGKKRPTDVHGTRVLHEAQVSTIQQGVCRRSYWQYAITDDMVCAGRGRRDSCAGDSGGPLLCRDRSNRYVLQGITSFGDGCGKRGKYGIYTRTAGYVTWIKDVMNSKYFD

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
KQ459586    KPI97877.1    KQ460883    KPJ11407.1    KQ434870    KZC09604.1    + More
KQ977642    KYN01001.1    KZ288263    PBC30341.1    QOIP01000005    RLU22998.1    GL436272    EFN72139.1    KK107847    EZA47450.1    KQ980295    KYN16873.1    GBYB01009222    JAG78989.1    KQ982585    KYQ54247.1    GBYB01009219    GBYB01009220    GBYB01009221    JAG78986.1    JAG78987.1    JAG78988.1    ADTU01018618    ADTU01018619    KQ981979    KYN31531.1    GL448770    EFN83879.1    GL761846    EFZ22722.1    GL887491    EGI71013.1    GECZ01025374    JAS44395.1    KQ976625    KYM78967.1    GBGD01001379    JAC87510.1    KQ414755    KOC61806.1    FX985322    BAX07335.1    GBBI01003878    JAC14834.1    GDKW01002911    JAI53684.1    GDIP01175566    JAJ47836.1    GDIQ01249890    JAK01835.1    GDIP01156186    JAJ67216.1    GDIP01175567    JAJ47835.1    GDIP01175568    JAJ47834.1    GDIQ01245151    JAK06574.1    GDIP01146579    JAJ76823.1    GDIQ01034464    JAN60273.1    GDIQ01147133    JAL04593.1    GDIQ01185007    GDIP01073193    JAK66718.1    JAM30522.1    GDIP01156397    JAJ67005.1    KQ435727    KOX78002.1    GDIQ01127971    JAL23755.1    CH902618    EDV40277.1    KPU78476.1    JXUM01072683    JXUM01072684    JXUM01072685    JXUM01072686    JXUM01072687    JXUM01072688    KQ562734    KXJ75235.1    CH477755    EAT36577.1    GDIQ01207151    JAK44574.1    GDIQ01021376    JAN73361.1    CCAG010000255    GDIP01100729    JAM02986.1    AE014296    ABW08531.1    ABW08532.2    GDIQ01151127    JAL00599.1    GDIP01042540    JAM61175.1    CH954178    EDV51563.2    CM002912    KMY99235.1    CH379069    EAL30903.2    KRT07752.1    CH479188    EDW40336.1    CM000159    EDW94301.2    KRK01755.1    JH431820    GDIP01164132    JAJ59270.1    UFQT01000007    SSX17455.1    KK855062    PTY20620.1    GDIQ01228089    JAK23636.1    CH940647    EDW69476.1    OUUW01000012    SPP87428.1    GDIQ01151126    JAL00600.1    CH916366    EDV96095.1    CH933809    EDW18024.1    KRG05906.1    KRG05907.1    CVRI01000047    CRK98407.1    CRK98406.1    JXJN01008760    JXJN01008761    GDIP01132792    JAL70922.1    ATLV01017482    ATLV01017483    ATLV01017484    ATLV01017485    ATLV01017486    ATLV01017487    ATLV01017488    ATLV01017489    KE525170    KFB42205.1    JH432147    GALX01002808    JAB65658.1    KQ971343    EFA04569.1   
Pfam
PF00089   Trypsin        + More
PF00090   TSP_1
PF14778   ODR4-like
Interpro
IPR009003   Peptidase_S1_PA        + More
IPR001314   Peptidase_S1A       
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
IPR000884   TSP1_rpt       
IPR033116   TRYPSIN_SER       
IPR012224   Pept_S1A_FX       
IPR036383   TSP1_rpt_sf       
IPR029454   ODR-4-like       
SUPFAM
SSF50494   SSF50494        + More
SSF82895   SSF82895       
PDB
5UGG     E-value=6.50721e-37,     Score=387

Ontologies

Topology

Length:
485
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0432700000000001
Exp number, first 60 AAs:
0.03557
Total prob of N-in:
0.00421
outside
1  -  485
 
 

Population Genetic Test Statistics

Pi
219.133147
Theta
176.512854
Tajima's D
0.410902
CLR
0.420533
CSRT
0.484125793710315
Interpretation
Uncertain
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