SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13102
Pre Gene Modal
BGIBMGA000387
Annotation
PREDICTED:_carboxypeptidase_N_subunit_2_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.512 Nuclear   Reliability : 1.766
 

Sequence

CDS
ATGTGTAGATGCGACGCGGCCCGACGGTCACTCAACTGTTGGAGGGCCGGCCTGACTGCACTCACTGGGGACTTGACCGCGCCCGCTGATCTTCTCACCATAGATTTGGGGTCAAATAAGCTACGCACCCTACACAAGACCACATTTAAAGGAATGCGTGCGCTAACTGAACTAGATATGTTCGACAATCACGTCGAATATTTGCCGGGAGGAATATTCGAATCTCTTGTGAACTTGAAAACCCTGCGTCTACAGAGGAATTATTTAGAAGAAATTGATAGCGAAGCGTTTACGTCAACAAAAAAACTTTTCCACGTGGATTTGTCCAACAATTATTTGTATACACTACCAGAAAAGCTATTTGCCAACAATACATTTCTTGAAACCATCGATATCTCAAATAACCGTGTTGTATACGTTCCATCAGATAGTTTCTTAGGATTGTATTCTCTACAAATACTCGATTTATCGAAAAACAAAATACAAAATATCCAAAACGGAACGTTTTCGCTGAAGAACCTCCAGATCTTGAAACTGTCGGACAATAAGATAAACAACATTAGTGACAACGCCTTTGAGAACTTATTGTCCTTGGAAACTTTATTATTAGATCGGAATAAATTAAAGAATATTCCGACACAATTATTTAATAATCTGAAATGTTTGATTTTCCTAGATCTGTCCAATAATAATTTGATGAGTTTGGCTGGGGTTGAATTTGAAAGCCTGAAATTATTACGTAATTTAGATTTGAAGGAAAACGCTCTAAGCCAAATACCTGACAACACATTTTCTGACTGTTTCAACTTGGAGAAACTTGATTTATCTAAAAATAAACTACGCTTTATAAATATAACTGCTTTTTACGGTCTAGAAAATCTTACTACGCTACTTTTATCCGAAAACAAATTATATGAAGTACATTTCAAAGCGTTTTCTATGCTGAAGAATCTGACAACATTATACTTGGATGGTAATATGTTTCCTTCGCTGCCATCTCGCACCCTGGATTACATGCCGAAGCTTACGATCGTAAAATTATCTGGAAATCCTTGGCACTGCGACTGCCATGCTCTCTATATTTCAGCGTGGGTTCGTTTGAATGAAATGAAGATCTGGGATTACTCCCCAACGTGTGTATCGCCCTGGTATTTGGAAGGGCATTTCCTGAAAAAGTTAAAATTTCCAGAACTTTGCGCCGGGCAGTGGGCCAGTATGGTGAACCTTTCGCCACGCCTTCCTATACAACAGCTTCTGGCTTTAAACGTATCAGTAAATCGTAAGCCTCAAGACAGTATGGAGCAGAATCATGATTATACAACCGTCGATACCTGGCATTAA
Protein
MCRCDAARRSLNCWRAGLTALTGDLTAPADLLTIDLGSNKLRTLHKTTFKGMRALTELDMFDNHVEYLPGGIFESLVNLKTLRLQRNYLEEIDSEAFTSTKKLFHVDLSNNYLYTLPEKLFANNTFLETIDISNNRVVYVPSDSFLGLYSLQILDLSKNKIQNIQNGTFSLKNLQILKLSDNKINNISDNAFENLLSLETLLLDRNKLKNIPTQLFNNLKCLIFLDLSNNNLMSLAGVEFESLKLLRNLDLKENALSQIPDNTFSDCFNLEKLDLSKNKLRFINITAFYGLENLTTLLLSENKLYEVHFKAFSMLKNLTTLYLDGNMFPSLPSRTLDYMPKLTIVKLSGNPWHCDCHALYISAWVRLNEMKIWDYSPTCVSPWYLEGHFLKKLKFPELCAGQWASMVNLSPRLPIQQLLALNVSVNRKPQDSMEQNHDYTTVDTWH

Summary

Similarity
Belongs to the glycosyltransferase 10 family.
EMBL
ODYU01007149    SOQ49676.1    BABH01013137    BABH01013138    BABH01013139    RSAL01000111    + More
RVE47085.1    AGBW02011240    OWR46957.1    KQ459586    KPI97873.1    KQ460883    KPJ11411.1    KQ971343    EFA04699.1    UFQS01001567    UFQT01001567    SSX11477.1    SSX31044.1    GECU01020789    JAS86917.1    GEDC01031345    JAS05953.1    GEZM01032323    JAV84667.1    UFQS01003149    UFQT01003149    SSX15270.1    SSX34645.1    GFXV01000898    MBW12703.1    ABLF02038891    GBXI01001673    JAD12619.1    JRES01000951    KNC26861.1    CH379070    EAL30159.2    OUUW01000002    SPP77562.1    CH479203    EDW30262.1    GDHF01014336    JAI37978.1    GEZM01032322    JAV84669.1    SPP77561.1    CH954178    EDV50966.1    CM000159    EDW93460.1    CM000363    CM002912    EDX09262.1    KMY97673.1    AE014296    AY047503    AAF47941.2    AAK77235.1    CH902618    EDV39011.1    CCAG010000253    CH963847    EDW73529.2    JXJN01008760    PYGN01000143    PSN52955.1    CP012525    ALC43058.1    CH916366    EDV95587.1    ACPB03014531    ACPB03014532    KQ434902    KZC11084.1    GBHO01023166    GDHC01013266    JAG20438.1    JAQ05363.1    CH940669    EDW58264.1    KRF78205.1    CH933809    EDW17575.1    KRF78204.1    KRG05621.1    CVRI01000047    CRK98053.1    GAMC01002624    JAC03932.1    GDIP01110095    JAL93619.1    AAZX01010313    KQ414940    KOC59159.1    GDIP01158993    GDIQ01199949    GDIQ01198648    GDIQ01029273    JAJ64409.1    JAK53077.1    GDIP01031788    JAM71927.1    GDIP01173927    JAJ49475.1    GDIQ01057305    JAN37432.1    GDIQ01219398    JAK32327.1    GDIQ01267408    JAJ84316.1    GDIQ01116295    JAL35431.1    GDIQ01198647    GDIQ01093638    JAK53078.1    GDIQ01266425    JAJ85299.1    GDIQ01266424    JAJ85300.1    KQ780658    OAD51940.1    LJIJ01000067    ODN03637.1    GDHC01009229    JAQ09400.1    GBYB01004339    JAG74106.1    KQ977412    KYN02904.1    GDIP01162393    JAJ61009.1    GL888002    EGI69243.1    GAMC01002623    JAC03933.1    KQ976598    KYM79563.1    KQ979039    KYN23272.1    GDIQ01027701    JAN67036.1    KQ981855    KYN34904.1    LJIG01000762    KRT86178.1    ADTU01000983    ADTU01000984    KQ982736    KYQ51463.1    CH480817    EDW50529.1    GDIP01240129    GDIQ01124425    JAI83272.1    JAL27301.1    GL445255    EFN89908.1    GDIQ01039118    JAN55619.1    QCYY01001043    ROT80960.1    GL443122    EFN62549.1    GGMR01018490    MBY31109.1    APGK01028341    KB740686    ENN79552.1    KB631930    ERL87309.1    NEVH01025672    PNF15037.1    QOIP01000005    RLU22276.1    KK107293    EZA53244.1    LRGB01003056    KZS04830.1    GL732531    EFX85909.1    GDIQ01050871    JAN43866.1    GDIQ01267406    JAJ84318.1    LBMM01003761    KMQ93167.1    GDIQ01236130    JAK15595.1    GDIQ01133128    JAL18598.1   
Pfam
PF13855   LRR_8        + More
PF13306   LRR_5
PF00560   LRR_1
PF12799   LRR_4
PF01395   PBP_GOBP
PF00852   Glyco_transf_10
PF17039   Glyco_tran_10_N
Interpro
IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR020894   Cadherin_CS       
IPR000225   Armadillo       
IPR002126   Cadherin-like_dom       
IPR026906   LRR_5       
IPR000483   Cys-rich_flank_reg_C       
IPR025875   Leu-rich_rpt_4       
IPR006170   PBP/GOBP       
IPR036728   PBP_GOBP_sf       
IPR031283   AMIGO       
IPR038577   GT10-like_sf       
IPR001503   Glyco_trans_10       
IPR031481   Glyco_tran_10_N       
SUPFAM
SSF47565   SSF47565       
Gene 3D
PDB
5A5C     E-value=1.83458e-29,     Score=323

Ontologies

Topology

Subcellular location
  
Length:
446
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.78067
Exp number, first 60 AAs:
0.59677
Total prob of N-in:
0.07562
outside
1  -  446
 
 

Population Genetic Test Statistics

Pi
282.933698
Theta
190.313512
Tajima's D
1.605651
CLR
0.362206
CSRT
0.810309484525774
Interpretation
Uncertain
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