SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13095  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000390
Annotation
PREDICTED:_phosphoribosylformylglycinamidine_synthase_[Amyelois_transitella]
Full name
Phosphoribosylformylglycinamidine synthase      
Alternative Name
Formylglycinamide ribonucleotide amidotransferase
Formylglycinamide ribotide amidotransferase
Protein adenosine-2
Location in the cell
Cytoplasmic   Reliability : 2.512
 

Sequence

CDS
ATGTCTATCGTACGATTCTTTTCTACCGAAGCATTTAGTTTACATAAAACAAATGAAATTTTACAAAAACTGAAGTTTGTGGATAGTGATATAAAAGATTTGTCTACTGAGCTGTGTTACCATGTAGAGCTGGCTGAAGGCTGTGAATATCTCAATATAAATCAGATCAAAGTGTTAAAATGGCTGTTGAGTTCACCACTACAGCCTCAAGCTGTTAGAAATGAAACTATCTTCAAAAGTAATGATAACAGTCAGCTTTTAATAGAAATTGGTCCTAGGTTTAATTTCTCAACAGCAGACTCCAGTAACTCTGTGCAGATTTGTGAAAGCGTGGGTCTACGCGATGTTGTTCGTCTTGAAGTGTCTACAAGATACCTAATTACATTTGGAAAACAAAAAAATGTTACTGAAAAACATTTTGAGAATTTAGCTGCAGTGTTACATGATAGGATGACGCAATGTGTTTATACAAAGGATAATCTACCCCGTAAAAGTTTTAATGAAGGCCTGCCAAAAGATTTAGAACCATGGTTTGTTGTTCCCTTGCAAGAGCAAGGCATTTCTGCTATGAGAAAGGTTAATGATAAATTAGGTTTGGCATTTGATACATGGGACATGGAATTTTACATGGATTTATTTGTGAACAAACTGAAAAGGGATCCTACGAGTGTAGAACTATTTGACCTCGCCCAGAGCAACAGTGAACATTCACGTCATTGGTTTTTCAAGGGTAAGTTAGTATTGGATGGTAAAGAGATAAATGAATCTTTAATTGATATGGTTGCTTCAACACAAAAAACTTCGAATAATAACAATGTTATTAAATTTGGTGATAACAGTAGTGCAATCAAAGGCTTCCAACATACAATATTGCGTCCTACCAATGTTAGAGGACCATCGCAAGTTATCCAGAAGAAAACAGAATCTGATATAATATTCACGGCAGAAACTCACAATATGCCAACCGCAGTAGCCCCTTTTAGCGGGGCTACAACTGGTACGGGGGGACGTATTAGGGACGTTCAAGGAGTTGGTCGTGGTGGACACACAGTTGCTGGCACAGCTGGGTATAGTGTGGGCAACCTACATATACCAGGGTACGATCTACCGTGGGAGGAAAAAGGTTGGGAATATCCAAGTAATTTTGCAACACCTCTACAAATTATAATAGAAGCCAGCAATGGAGCTTCAGACTATGGAAACAAGTTTGGTGAACCAGTAATATCTGGATTTGTCCAATCGTATGGATTGAAAAATGCGGACAATACAAGAGAAGAATTTGTGAAACCGATAATGTTTAGTGGTGGTATCGGCTACATGCCACATTCGATGATTAAAAAAAACAAACCCGACAAAGGTATGCTGCTAGTGAAGATCGGTGGTCCCGTATATCGTATCGGCGTCGGTGGTGGGGCCGCTTCCTCCGTAGCCGTGCAGGGCGGCGACGCTAGAGACCACGCCCTTGACTTTGGAGCTGTGCAGAGAGGTGATGCGGAAATGGGTAATCGTCTGAACCGCGTGGTTCGTGGATGTCTGGAATCCGATGTTAATCCAGTTGAATGTGAGTATTTTTTCAATCATGTTATTTTTTGA
Protein
MSIVRFFSTEAFSLHKTNEILQKLKFVDSDIKDLSTELCYHVELAEGCEYLNINQIKVLKWLLSSPLQPQAVRNETIFKSNDNSQLLIEIGPRFNFSTADSSNSVQICESVGLRDVVRLEVSTRYLITFGKQKNVTEKHFENLAAVLHDRMTQCVYTKDNLPRKSFNEGLPKDLEPWFVVPLQEQGISAMRKVNDKLGLAFDTWDMEFYMDLFVNKLKRDPTSVELFDLAQSNSEHSRHWFFKGKLVLDGKEINESLIDMVASTQKTSNNNNVIKFGDNSSAIKGFQHTILRPTNVRGPSQVIQKKTESDIIFTAETHNMPTAVAPFSGATTGTGGRIRDVQGVGRGGHTVAGTAGYSVGNLHIPGYDLPWEEKGWEYPSNFATPLQIIIEASNGASDYGNKFGEPVISGFVQSYGLKNADNTREEFVKPIMFSGGIGYMPHSMIKKNKPDKGMLLVKIGGPVYRIGVGGGAASSVAVQGGDARDHALDFGAVQRGDAEMGNRLNRVVRGCLESDVNPVECEYFFNHVIF

Summary

Description
Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (By similarity).
Catalytic Activity
ATP + H2O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide = 2-(formamido)-N(1)-(5-phospho-D-ribosyl)acetamidine + ADP + H(+) + L-glutamate + phosphate
Similarity
In the N-terminal section; belongs to the FGAMS family.
Keywords
ATP-binding   Complete proteome   Glutamine amidotransferase   Ligase   Magnesium   Metal-binding   Nucleotide-binding   Purine biosynthesis   Reference proteome  
Feature
chain  Phosphoribosylformylglycinamidine synthase
EC Number
6.3.5.3
EMBL
BABH01013153    BABH01013154    ODYU01003346    SOQ41989.1    NWSH01004978    PCG64537.1    + More
KZ150009    PZC75103.1    KQ459586    KPI97867.1    KQ460883    KPJ11417.1    AGBW02011240    OWR46951.1    UFQT01000742    SSX26872.1    UFQT01000651    SSX26123.1    CVRI01000001    CRK86525.1    GDHF01017584    GDHF01010392    GDHF01003373    JAI34730.1    JAI41922.1    JAI48941.1    GDHF01018707    JAI33607.1    GAKP01010819    JAC48133.1    GFDF01002811    JAV11273.1    GDHF01033368    GDHF01020785    GDHF01000125    JAI18946.1    JAI31529.1    JAI52189.1    GALX01004330    JAB64136.1    CCAG010014695    JXJN01025727    GBXI01008161    JAD06131.1    GEDC01006286    JAS31012.1    CP012523    ALC38170.1    KB632012    ERL87998.1    GANO01000762    JAB59109.1    AJWK01028155    CH963857    EDW76327.1    LJIG01009308    KRT83339.1    NNAY01001258    OXU24590.1    GEBQ01003678    JAT36299.1    CH480820    EDW54457.1    CH940649    EDW63604.1    KRF81184.1    KRF81185.1    OUUW01000010    SPP86101.1    ADMH02001227    ETN63588.1    AJVK01022373    AJVK01022374    GGFK01000529    MBW33850.1    GGFK01000483    MBW33804.1    KQ414786    KOC60876.1    CH916368    EDW02888.1    GAMC01009326    JAB97229.1    KQ765605    OAD53852.1    CH477339    EAT43159.1    PYGN01002080    PSN31568.1    JRES01001393    KNC23191.1    KZ288322    PBC28158.1    CH379058    EAL34261.2    U00683    AE014134    BT011143    GGFK01000700    MBW34021.1    KRT03322.1    CH479180    EDW28224.1    CH954177    EDV58565.1    KQ971338    EFA02192.2    KA647478    AFP62107.1    CM000157    EDW88848.2    GEZM01017306    GEZM01017305    JAV90783.1    CM000361    CM002910    EDX03901.1    KMY88446.1    AXCM01001046    AAAB01008987    EAA01024.2    AXCN02000239    GL763196    EFZ20043.1    APCN01002018    KK107128    EZA58391.1    QOIP01000006    RLU21996.1    KK852794    KDR16414.1    CH902620    EDV31547.1    KQ435878    KOX70064.1    LBMM01004407    KMQ92447.1    GL438630    EFN68691.1    CH933807    EDW11727.1    KRG02871.1    KQ981272    KYN43813.1    GL888045    EGI68877.1    GBRD01012666    JAG53158.1    DS234992    EEB09999.1    NEVH01003749    PNF40114.1    GFDL01000976    JAV34069.1    KQ977412    KYN02867.1    APGK01039519    APGK01039520    KB740971    ENN76633.1    GFDL01000973    JAV34072.1    KQ983176    KYQ46907.1   
Pfam
PF18076   FGAR-AT_N        + More
PF00586   AIRS
PF18072   FGAR-AT_linker
PF02769   AIRS_C
PF16041   DUF4793
PF16040   DUF4792
PF16884   ADH_N_2
PF00107   ADH_zinc_N
Interpro
IPR041609   PurL_linker        + More
IPR010918   PurM-like_C_dom       
IPR029062   Class_I_gatase-like       
IPR036676   PurM-like_C_sf       
IPR017926   GATASE       
IPR036604   PurS-like_sf       
IPR016188   PurM-like_N       
IPR040707   FGAR-AT_N       
IPR010073   PurL_large       
IPR036921   PurM-like_N_sf       
IPR032008   DUF4792       
IPR032010   DUF4793       
IPR020843   PKS_ER       
IPR014190   PTGR1       
IPR011032   GroES-like_sf       
IPR013149   ADH_C       
IPR041694   ADH_N_2       
IPR036291   NAD(P)-bd_dom_sf       
IPR001156   Transferrin-like_dom       
SUPFAM
SSF52317   SSF52317        + More
SSF56042   SSF56042       
SSF55326   SSF55326       
SSF82697   SSF82697       
SSF51735   SSF51735       
SSF50129   SSF50129       
Gene 3D
PDB
4MGH     E-value=2.66125e-56,     Score=555

Ontologies

Topology

Length:
530
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03239
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00097
outside
1  -  530
 
 

Population Genetic Test Statistics

Pi
432.471813
Theta
219.498373
Tajima's D
3.305929
CLR
0.141545
CSRT
0.992300384980751
Interpretation
Uncertain
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