SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13094  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000390
Annotation
PREDICTED:_phosphoribosylformylglycinamidine_synthase_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.226
 

Sequence

CDS
ATGCCACGAAAAACCTTCGATTTACAAACTGAAAAAAGGACCAAGTTACCTTTGTCATTTCCTAAAGACATAACGGTGAAGAGTGCACTCGATCGCGTTCTGAGGCTTGTCAATGTTGCCAGCAAAAGATACCTAACCAACAAGGTCGACCGTTGTGTCACTGGTCTCGTAGCCCAACAGCAATGTGTGGGCCCACTTCACACTCCGCTGGCGGATTGCGCTATTATAGCACTTTCTTACTACGACCTCGTCGGCTCGGCCACTTCTATCGGTACACAGAACATCAAGGGACTACTGGACCCGGCAGCCGGAGCGAGATTGTCATTAGGGGAGGCTCTAACTAATTTGGTGTTCGCCGGCATATCGGAGCTGGAGGACGTGAAGTGTTCAGGGAACTGGATGTGGGGCGGCAAGACCGGCGTGGAGGGCGGCGCGCTGACCGCGGCGTGCGGCGCGCTGTGCGGCGCCATGCGCGCGCTCGGCGTCGCCGTCGACGGCGGGAAGGACTCGCTCTCCATGTGCGCACACGTCGCCGGCGAGAAAGTTAAGTCTCCGGGAACTTTGGTGGTATCGACATACGCCCCTTGTCCAGATATTACCGTTAAAATTGAACCAGCACTCAAAGAAGAAAACTCCGCTCTGGTTCACGCACCTGTTTCACCAGGAAAATACAGACTTGGTGGTTCAGCATTGGCTCAATGTTACAAGCAGCTAGGCGATAATCCTCCCGATTTAGACGATCCCATCATATTGAAAAGTCTATTCAAGATTACACAGAAATTACTAAAAGAAAAAAAATTGATATCCGGTCATGATATCAGCGAAGGAGGCTTCATAACAACGGTACTTGAGATGGGTATCGGTGGTGTTCGCGGTTTGAATCTACACGTCAACGTTGCCGCCAATGTCTCGCCCATCGAAGCGCTGTTCAATGAGGAACTTGGTATCGTTCTGGAAGTTTCCAAAAACGACTTGCCCTATGTTCTAAGCGAATACAACAACAATGGCGTCGGTGCACAGCACATTGGTTACACTGGGAAATACGGCATGGATTCTCAGGTTGTGATAAATTTGAATGGCGTTAATGTTTTGGATACTGTTCTCATTGATGTGTTCAGAATGTGGGAGGAAACTAGTTATCGTTTGGAATGCTTGCAAGCTAACACTGATTGTGTCCTCCAAGAATGGAAAGTTCTTGAGAAACGTAAAGGAGCCACATACAACGTTACTTTTGATCCTACGGCTGCAGTTATTAAAACGAAATCCATTAAGGTTGCAGTACTTCGTGAAGAAGGTATCAATGGAGACAGGGAAATGATCGCATCTCTAATGCTAGCCAACTTTGATGTGTTTGATGTAACAATGAGTGACTTACAAAACAAGAAGATTACTCTGGATGCGTTCCAAGGTGTTGTTTTCCCGGGAGGTTTCAGTTACGCAGACACTCTGGGTTCTGCTAAAGGCTGGGCTGCTGGAATATTATTCTCAGAATCTCTAAGCTCGCAATTTGCTCACTTTAAAGATAGAAAAGACACTTTCTCTTTGGGAGTTTGTAATGGGTGTCAGCTAATGGCTATGCTAGGATGGGTGGATCCCGATAGCAATTCCAAAGGTTCAAACAAGGCCCAGATATTCCTAGACCATAATAGCTCGGAAAGATTTGAATGCCGATGGAGTGCCGTGAAGATACACGAGAACGAGAACAAAGAAGACGTGTGGTTCCGCGGGATGGGCGGCAGCGTGCTCGGCGTGTGGGTCGCGCACGGCGAAGGACGATTCACGGTCGCCGACGGTTCCCTACTCGACAAACTGTACAAGAACGGACAAGTCGCTGTACAGTATGTCGACGACGACGGAAAGCCCACCGAGGTGTACCCGATGAATCCCAATGGAAGTCCAGATGGGCTGGCTGGTGTCCGTTCACGTGACGGCCGTCACATAGCTATGATGCCACATCCAGAGCGTTGTGTTTTACGTTGGCAATGTCCGGCTCCTTGCCCCACGGTAACTAATCCGTCTGTACGCAACAGCCAAGCCTCGCCGTGGTTGCGGCTCTTCCAAAATGCCTACTCGTGGGCTATTAATCATTAA
Protein
MPRKTFDLQTEKRTKLPLSFPKDITVKSALDRVLRLVNVASKRYLTNKVDRCVTGLVAQQQCVGPLHTPLADCAIIALSYYDLVGSATSIGTQNIKGLLDPAAGARLSLGEALTNLVFAGISELEDVKCSGNWMWGGKTGVEGGALTAACGALCGAMRALGVAVDGGKDSLSMCAHVAGEKVKSPGTLVVSTYAPCPDITVKIEPALKEENSALVHAPVSPGKYRLGGSALAQCYKQLGDNPPDLDDPIILKSLFKITQKLLKEKKLISGHDISEGGFITTVLEMGIGGVRGLNLHVNVAANVSPIEALFNEELGIVLEVSKNDLPYVLSEYNNNGVGAQHIGYTGKYGMDSQVVINLNGVNVLDTVLIDVFRMWEETSYRLECLQANTDCVLQEWKVLEKRKGATYNVTFDPTAAVIKTKSIKVAVLREEGINGDREMIASLMLANFDVFDVTMSDLQNKKITLDAFQGVVFPGGFSYADTLGSAKGWAAGILFSESLSSQFAHFKDRKDTFSLGVCNGCQLMAMLGWVDPDSNSKGSNKAQIFLDHNSSERFECRWSAVKIHENENKEDVWFRGMGGSVLGVWVAHGEGRFTVADGSLLDKLYKNGQVAVQYVDDDGKPTEVYPMNPNGSPDGLAGVRSRDGRHIAMMPHPERCVLRWQCPAPCPTVTNPSVRNSQASPWLRLFQNAYSWAINH

Summary

EMBL
BABH01013153    BABH01013154    ODYU01003346    SOQ41989.1    KZ150009    PZC75103.1    + More
KQ459586    KPI97867.1    AGBW02011240    OWR46951.1    KQ460883    KPJ11418.1    GFJQ02003241    JAW03729.1    DS234992    EEB09999.1    LNIX01000006    OXA53192.1    KK119317    KFM75369.1    NNAY01001258    OXU24590.1    KK852794    KDR16414.1    GGLE01000970    MBY05096.1    KQ765605    OAD53852.1    GBYB01001517    JAG71284.1    KQ981272    KYN43813.1    GBYB01002847    JAG72614.1    GFWV01020212    MAA44940.1    KQ977412    KYN02867.1    KQ414786    KOC60876.1    MNPL01000952    OQR79567.1    GL888045    EGI68877.1    KZ288322    PBC28158.1    LJIJ01000134    ODN01910.1    GG666471    EEN67359.1    KQ978756    KYN28592.1    CM004483    OCT61927.1    GANP01008789    JAB75679.1    KQ976595    KYM79602.1    NEVH01003749    PNF40112.1    GEFM01003104    JAP72692.1    KQ435878    KOX70064.1    PNF40114.1    ADTU01023073    ADTU01023074    ADTU01023075    ADTU01023076    ADTU01023077    ADTU01023078    ADTU01023079    AAMC01096052    PNF40115.1    LBMM01004407    KMQ92446.1    BC168641    AAI68641.1    KQ983176    KYQ46907.1    MWRG01003428    PRD31579.1    JRES01001393    KNC23191.1    AERX01004326    GFDF01002811    JAV11273.1    GEZM01017306    GEZM01017305    JAV90783.1    GCES01152740    JAQ33582.1    GCES01113131    JAQ73191.1    KK107128    EZA58391.1    AAWZ02028504    AAWZ02028505    QOIP01000006    RLU21996.1    GCES01143987    JAQ42335.1    GCES01141215    JAQ45107.1    GEDV01003975    JAP84582.1    GDKW01000428    JAI56167.1    GFAC01003355    JAT95833.1    LJIG01009308    KRT83339.1    UFQT01000742    SSX26872.1    GFPF01010615    MAA21761.1    GCES01108011    JAQ78311.1    UFQT01000651    SSX26123.1    APGK01039519    APGK01039520    KB740971    ENN76633.1    NHOQ01001926    PWA20761.1    GANO01000762    JAB59109.1    NEDP02001454    OWF53251.1    AYCK01004012    GAAZ01001882    JAA96061.1    IAAA01001579    LAA02401.1    CH477339    EAT43159.1    HADX01007980    SBP30212.1    KB310029    ELT92693.1    HADW01018535    SBP19935.1    AMQN01013186    AMQN01013187    GDHC01003429    JAQ15200.1   
Pfam
PF18076   FGAR-AT_N        + More
PF00586   AIRS
PF18072   FGAR-AT_linker
PF02769   AIRS_C
Interpro
IPR041609   PurL_linker        + More
IPR010918   PurM-like_C_dom       
IPR029062   Class_I_gatase-like       
IPR036676   PurM-like_C_sf       
IPR017926   GATASE       
IPR036604   PurS-like_sf       
IPR016188   PurM-like_N       
IPR040707   FGAR-AT_N       
IPR010073   PurL_large       
IPR036921   PurM-like_N_sf       
SUPFAM
SSF52317   SSF52317        + More
SSF56042   SSF56042       
SSF55326   SSF55326       
SSF82697   SSF82697       
Gene 3D
PDB
4R7G     E-value=4.85507e-112,     Score=1037

Ontologies

Topology

Length:
696
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.1082
Exp number, first 60 AAs:
0.00023
Total prob of N-in:
0.00485
outside
1  -  696
 
 

Population Genetic Test Statistics

Pi
280.398537
Theta
182.268034
Tajima's D
2.040444
CLR
0
CSRT
0.891255437228139
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 DSLSMCAHVAGEKVLEK 95.45 7e-09
26822097 GIIDPAAGAR 100.00 3e-07
26280517 WIEQFASEETK 100.00 3e-07
25044914 WQAIDPATVAIFIRPDIVQEYK 100.00 3e-07
28467696 WQAPTDFIGGVEFR 100.00 3e-07
25044914 GATYGKPK 100.00 1e-04
27102218 FTVADGSIIDK 100.00 4e-04
31250652 YGNKIGLQEFATEAHGMIK 100.00 0.006
31250652 FGEPVISAIHDQGAGGNGNVLKELVEPEGAVVFTK 100.00 0.020
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