SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13093
Pre Gene Modal
BGIBMGA000311
Annotation
fadd_[Bombyx_mori]
Full name
Fas-associated death domain protein      
Alternative Name
Death domain-containing adapter protein BG4
FAS-associating death domain-containing protein
Location in the cell
Cytoplasmic   Reliability : 1.434
 

Sequence

CDS
ATGACTAAGTCAGAATATTCACTACTAAAAGATGAGATAATTTTACGTGCAAGTGGAACTCCAAGACACGGTGAGATTTTGAGGTCTGTAAAAGAAATATATAAACAAAGTATTAACTCTAAAAGAAGATATGAACAAATTGAAACGATTGCGCAGCTGTTGAAAGTGTTGGAAATACGAGATGTATTGTCTGAAAATAGCATTGAGCCACTGAAAGAAGTCGCACGAAGACTACAAGATAATAATGAATTACTGCGTAAAATTACAGATTATGAGTTAATTTCTGTATCAAAGAAGGACCTAAATAACACAGTATCATCATTTACTGCAACGCATGATGAAAAAATTGAAAGTGTTATAAAGTTGAATCCATTTGGTGGCAATTTAAGTCCAAGAAAAAAAGAAAGACTATTTGAAACTATAATAGAAGAAACAGGTACAAACTGGCGGGCTTTAGCTAGAAAATTAAAAATTCGAGAATGTGTAATTATCAAGATTGATGCTGAAGAAACTACACTAGCAGATAAAGTAAAAAAAATACTGGAGATATATGAGCAACGAGCAGATCCACAAAGGTGGTTTTTTGTTCTTTGTGATGCTTTGGAAGAATCATACAGGCGCGATATAGCAGATTCATTAAGAAATATTATAGTAATGAATATTTAA
Protein
MTKSEYSLLKDEIILRASGTPRHGEILRSVKEIYKQSINSKRRYEQIETIAQLLKVLEIRDVLSENSIEPLKEVARRLQDNNELLRKITDYELISVSKKDLNNTVSSFTATHDEKIESVIKLNPFGGNLSPRKKERLFETIIEETGTNWRALARKLKIRECVIIKIDAEETTLADKVKKILEIYEQRADPQRWFFVLCDALEESYRRDIADSLRNIIVMNI

Summary

Description
Component of the IMD signaling pathway and is required for the host defense against Gram-negative bacteria. Interacts with Dredd, promotes cleavage of Dredd and is necessary and sufficient for enhancing Dredd-induced apoptosis.
Component of the IMD signaling pathway and is required for the host defense against Gram-negative bacteria. Interacts with Dredd, promotes cleavage of Dredd and is necessary and sufficient for enhancing Dredd-induced apoptosis (By similarity).
Subunit
Interacts (via N-terminus) with Dredd; likely to bind Dredd simultaneously with Diap2 to form a trimeric complex (PubMed:10934188, PubMed:22549468). Interacts with imd (PubMed:12433364).
N-terminus interacts with Dredd. Interacts with imd (By similarity).
Keywords
Apoptosis   Complete proteome   Cytoplasm   Reference proteome  
Feature
chain  Fas-associated death domain protein
EMBL
BABH01013154    GQ426292    ADM32518.1    KZ150009    PZC75104.1    KQ459586    + More
KPI97866.1    GDQN01010132    JAT80922.1    ODYU01003346    SOQ41988.1    AGBW02011240    OWR46949.1    KQ460883    KPJ11419.1    JTDY01008809    KOB64386.1    GALX01003515    JAB64951.1    GBXI01016096    JAC98195.1    GAMC01000645    JAC05911.1    KQ977412    KYN02908.1    GAKP01006459    JAC52493.1    GDHF01009990    JAI42324.1    JRES01000080    KNC34313.1    JXJN01004386    KQ971342    EFA04650.1    GL888656    EGI58628.1    KQ982179    KYQ59285.1    KQ981733    KYN36547.1    ADTU01016895    ADTU01016896    KQ980336    KYN16485.1    CH916366    EDV97429.1    GL764479    EFZ17590.1    GL435215    EFN73766.1    CH902617    EDV42584.1    KPU79801.1    AFFK01018673    KQ414755    KOC61786.1    JH431783    CCAG010013739    KQ434786    KZC05032.1    CP012525    ALC43475.1    GEZM01017388    GEZM01017387    JAV90737.1    CH954182    EDV54199.1    OUUW01000005    SPP81060.1    GL448819    EFN83756.1    APGK01037209    KB740948    ENN77263.1    CM000364    EDX13870.1    CH933809    EDW18164.1    BT058074    ACM78516.1    BT132793    AEU04542.1    AF295103    AF222005    AE014297    AM412815    AM412816    AM412817    AM412818    AAF44325.1    AAF55950.1    AAG22535.1    PYGN01001050    PSN38112.1    CH480815    EDW43132.1    KK853114    KDR11191.1    KQ435727    KOX78027.1    CH479179    EDW24207.1    CH940647    EDW70539.1    KZ288263    PBC30323.1    KK120062    KFM77430.1    NNAY01000966    OXU25691.1    PSN38111.1    CM000160    EDW97948.1    KJ639817    AJG36592.1    CH963876    EDW76929.1    CM000070   
Pfam
PF00531   Death        + More
PF01335   DED
PF15261   JHY
Interpro
IPR000488   Death_domain        + More
IPR011029   DEATH-like_dom_sf       
IPR001875   DED_dom       
IPR027968   JHY       
IPR002398   Pept_C14       
SUPFAM
SSF47986   SSF47986       

Ontologies

Topology

Subcellular location
Cytoplasm  
Length:
221
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.08976
outside
1  -  221
 
 

Population Genetic Test Statistics

Pi
122.550072
Theta
164.254725
Tajima's D
-0.861387
CLR
455.087699
CSRT
0.166591670416479
Interpretation
Uncertain
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