Gene

KWMTBOMO13090

Annotation

PREDICTED:_UPF0691_protein_C9orf116_homolog_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr22(-):8199720-8206174      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.034

CDS

ATGAGTGGAAATCAAGAAATAAATAATACAGTCAACGGAGCACAAGAAATGCAACCAGGGTTTTGTTCGGCGACCTGTGTGAACCGCTCAAAATTACAAGAAGAAATTAAAAAACCCGATCTTAAAACATCAGACCTGTTTATCACGTGTAATCTGCCGAAGAGATTCGAGCATCCACACTGGTTCAATGGTTATGGCTGTCAAGTGAGTAAGGAGCATCCGTTCTACAGAACTTCGGCAAGCGAATACGGATGGTATCCACCAGGTATACATTCGGTGTCTTCTGTATTTTTTCCCGCTGGTCAGAGGTTCACAAACCGTCTTGCTGCCGCCGGCATGTACCGCAACTACAGCCTCAACACCGGCATGGATCCCGCTTCGTATCCTTGA

Protein

MSGNQEINNTVNGAQEMQPGFCSATCVNRSKLQEEIKKPDLKTSDLFITCNLPKRFEHPHWFNGYGCQVSKEHPFYRTSASEYGWYPPGIHSVSSVFFPAGQRFTNRLAAAGMYRNYSLNTGMDPASYP

Uniprot

A0A2H1W9E8   A0A194PXW1   A0A194R141   A0A212EZL6   A0A0L7LKL7   A0A1E1WQL0   + More
A0A2J7RHX0   A0A2P8XBK5   A0A1S4G1V9   A0A084W9J1   A0A023EET1   A0A182JIZ0   A0A182XXI5   A0A182PBF9   F5HM64   A0A182HJI3   A0A182NL91   A0A182USK9   A0A182TWD0   A0A182RJ70   A0A336M5T0   A0A182VXP7   A0A034WBD5   A0A0K8U210   W8C3S3   A0A0A1XE94   A0A226F538   A0A0L0CGJ2   H2XVI8   A0A1W2W5F3   A0A0P9ANC0   L9JDJ8   A0A0Q9X1H4   A0A0Q9WXQ8   A0A0M4EJG0   A0A0Q9WFC7   A0A177BCK1   A0A087TXL0   I5ANB7   A0A1I8Q5U8   A0A2K6FK37   A0A1U7UI95   A0A2Y9E7I5   A0A2K5DTT2   A0A2K5JCV4   Q0KI89   A0A0D9RSW4   A0A2K6TV97   A0A1W4U8F4   Q4QQ19   A0A3B0K091   U3FKY6   F6PIM7   A0A2D0QZ90   A0A0R1E256  

Pubmed

26354079    22118469    26227816    29403074    17510324    24438588    + More
24945155    25244985    12364791    14747013    17210077    25348373    24495485    25830018    26108605    12481130    15114417    17994087    23385571    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25243066    17550304   

EMBL

ODYU01006871    SOQ49104.1    KQ459586    KPI97863.1    KQ460883    KPJ11422.1    + More
AGBW02011240    OWR46946.1    JTDY01000760    KOB75975.1    GDQN01001782    JAT89272.1    NEVH01003737    PNF40419.1    PYGN01004112    PSN29368.1    ATLV01021822    KE525323    KFB46885.1    GAPW01006403    JAC07195.1    AAAB01008982    EGK97375.1    APCN01002169    UFQS01000596    UFQT01000596    UFQT01005198    SSX05224.1    SSX25585.1    SSX35942.1    GAKP01007497    JAC51455.1    GDHF01031545    GDHF01028947    JAI20769.1    JAI23367.1    GAMC01002642    JAC03914.1    GBXI01005036    JAD09256.1    LNIX01000001    OXA64548.1    JRES01000501    KNC30619.1    EAAA01000058    CH902617    KPU79234.1    KB321054    ELW48399.1    CH964251    KRF99721.1    CH933806    KRG00800.1    CP012526    ALC47046.1    CH940650    KRF82806.1    LWCA01000053    OAF71413.1    KK117216    KFM69849.1    CM000070    EIM52452.1    AE014297    KX532094    ABI31160.1    ANY27904.1    AQIB01148093    BT023597    AAY84997.1    OUUW01000013    SPP87714.1    GAMS01007021    GAMR01000997    GAMQ01003385    GAMP01008244    JAB16115.1    JAB32935.1    JAB38466.1    JAB44511.1    GAMT01008113    JAB03748.1    CM000160    KRK03339.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000037510    UP000235965    UP000245037    + More
UP000030765    UP000075880    UP000076408    UP000075885    UP000007062    UP000075840    UP000075884    UP000075903    UP000075902    UP000075900    UP000075920    UP000198287    UP000037069    UP000008144    UP000007801    UP000011518    UP000007798    UP000009192    UP000092553    UP000008792    UP000054359    UP000001819    UP000095300    UP000233160    UP000189704    UP000248480    UP000233020    UP000233080    UP000000803    UP000029965    UP000233220    UP000192221    UP000268350    UP000008225    UP000221080    UP000002282   

PRIDE

Q0KI89    Q4QQ19   

Pfam

PF14892   DUF4490

Interpro

IPR026507   UPF0691       

ProteinModelPortal

A0A2H1W9E8   A0A194PXW1   A0A194R141   A0A212EZL6   A0A0L7LKL7   A0A1E1WQL0   + More
A0A2J7RHX0   A0A2P8XBK5   A0A1S4G1V9   A0A084W9J1   A0A023EET1   A0A182JIZ0   A0A182XXI5   A0A182PBF9   F5HM64   A0A182HJI3   A0A182NL91   A0A182USK9   A0A182TWD0   A0A182RJ70   A0A336M5T0   A0A182VXP7   A0A034WBD5   A0A0K8U210   W8C3S3   A0A0A1XE94   A0A226F538   A0A0L0CGJ2   H2XVI8   A0A1W2W5F3   A0A0P9ANC0   L9JDJ8   A0A0Q9X1H4   A0A0Q9WXQ8   A0A0M4EJG0   A0A0Q9WFC7   A0A177BCK1   A0A087TXL0   I5ANB7   A0A1I8Q5U8   A0A2K6FK37   A0A1U7UI95   A0A2Y9E7I5   A0A2K5DTT2   A0A2K5JCV4   Q0KI89   A0A0D9RSW4   A0A2K6TV97   A0A1W4U8F4   Q4QQ19   A0A3B0K091   U3FKY6   F6PIM7   A0A2D0QZ90   A0A0R1E256  

KEGG

101736203    no KO assigned | (RefSeq) UPF0691 protein C9orf116 homolog

GO

GO:0007368   GO:0006974   GO:0071494   GO:0010468   GO:0005634  

PANTHER

PTHR20899  

Length:

129

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10246

Exp number, first 60 AAs:

0

Total prob of N-in:

0.34241

outside

1  -  129

 

 

Pi

21.689745

Theta

179.833558

Tajima's D

0.661025

CLR

0.106709

CSRT

0.560721963901805

Interpretation

Uncertain