SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13082
Pre Gene Modal
BGIBMGA000306
Annotation
PREDICTED:_uncharacterized_protein_LOC101740563_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.563
 

Sequence

CDS
ATGAAAATAAGCACGTTTATATATAAACCTTACGTATTATTGGATGTGGATACTGCAGTGGCACCGCTCGGAAGAGACGGTATAGAAATAAGAATGATTGACGAATTTTGCAGATGGATTAATTGTACTGTTCAAATTATAAGAGAAGATGTGGACTTATGGGGAGAAATTTATGAAAATGAAACAGGCATCGGGGTTATCGGAAGTGTTGTTGAAGGCCGGTCGGATATTGGAATTGCCGCTTTATATTCGTGGTATGAAGAATGGAAAGCCATGGATTTTTCAGTTTCTGTTGTCAGATCGGCTGTAATATGCTTGGTACCAGCTCCAAGAGTTTTGGAAAGTTGGGAGTTACCTTTTCTGCCATTCGGTAAAAGTATATGGATAGCTGTCGTGATTACATTTGTGTATGCCAGCATCGGTTTGACAATCGCTCAGGGATGTTCTTCTAACAAAGCTCTATTAATTGTCTTTGGTACTATAATTTCACAGTCTCAGTATATAGTAAGCGACTCTTGGCGCATTCGTTCTGTTATTGGTTGGCTTTTAGTTTCAAGTTTGATTTTGGTAAGTGCTTACGGAGCTGGACTTGCTTCTACATTTACTGTACCGCAGTATGAGCCATCTATTGACACTGTCCAAGATCTTCTCAACAGCCGCATGGAATGGGGTGCTAATCACGAAGCTTGGACATTTTCTCTAGCTTTATCTTCTGAGCCAGTAGCAAAGAAGTTAATTAAACAGTTTAAAATCTATTCTTTTGAAGAGTTACAGAGAAGAAGTTTCTTAAGGAAAATGGCCTTTAGCTTGGAAGAACTACCAGCAGGTATGTACGTGTGA
Protein
MKISTFIYKPYVLLDVDTAVAPLGRDGIEIRMIDEFCRWINCTVQIIREDVDLWGEIYENETGIGVIGSVVEGRSDIGIAALYSWYEEWKAMDFSVSVVRSAVICLVPAPRVLESWELPFLPFGKSIWIAVVITFVYASIGLTIAQGCSSNKALLIVFGTIISQSQYIVSDSWRIRSVIGWLLVSSLILVSAYGAGLASTFTVPQYEPSIDTVQDLLNSRMEWGANHEAWTFSLALSSEPVAKKLIKQFKIYSFEELQRRSFLRKMAFSLEELPAGMYV

Summary

EMBL
BABH01013177    ODYU01000339    SOQ34923.1    KF487728    AII01126.1    KZ150009    + More
PZC75098.1    KY225531    ARO70543.1    KQ459586    KPI97856.1    KT588087    AOE47997.1    KQ460883    KPJ11427.1    HM562970    ADR64681.1    KR912015    ALM24942.1    MG546651    AYD42274.1    GCVX01000134    JAI18096.1    KX655897    AOG12846.1    KX084515    ARO76470.1    GEDO01000003    JAP88623.1    MG820681    AXF48852.1    KY325451    AQM73612.1    LC017786    BAR64800.1    KY283700    AST36359.1    JN836718    AFC91758.1    KU702620    AMM70647.1    KF487718    AII01116.1    AGBW02010414    OWR48561.1    KY283569    AST36229.1    KY283570    AST36230.1    GDKB01000020    JAP38476.1    KY325452    AQM73613.1    MF625609    AXY83436.1    ADMH02001856    ETN60852.1    NEVH01011896    PNF31178.1    CH916367    EDW01430.1    CH477186    EAT48971.1    FX982938    BAU20264.1    OUUW01000001    SPP75964.1    AXCM01004142    CH479181    EDW31287.1    AXCN02000174    AXCN02000175    CM000071    EDY68671.2    ATLV01012227    KE524773    KFB36231.1    CH933808    EDW09725.1    APCN01000586    CH954177    KQS71060.1    AAAB01008859    EAA07564.6    JXUM01029705    KQ560862    KXJ80588.1    CH963719    EDW72095.2    JXUM01063517    KQ562255    KXJ76291.1    KX609447    KB465964    ARN17854.1    RLZ02210.1    CH902619    KPU77322.1    CH940648    EDW61237.1    CH892654    EDX00750.2    AE013599    AAS64776.4    CP012524    ALC40675.1    JXUM01063522    KXJ76294.1    GEHC01000810    JAV46835.1    JXUM01029697    KXJ80586.1    EAT48976.1    KT279128    ALA15330.1    KK852549    KDR21537.1    KJ702122    AID61276.1    KP843217    ALD51353.1    ATLV01024999    KE525367    KFB52043.1    EAT48970.1    KB632326    ERL92496.1    EAT48977.1    NEVH01012083    PNF30918.1    CH933809    EDW19232.2    PYGN01001791    PSN32793.1    PYGN01000253    PSN50071.1    CP012526    ALC48029.1    JXJN01012751    JXJN01012752    AJWK01024855    PYGN01000353    PSN47912.1    GABX01000042    JAA74477.1    ACPB03022727    ACPB03026405    CH940647    EDW70844.2    AJVK01021584    KU523594    APZ81416.1    CH480844    EDW49824.1    KK852631    KDR19831.1   
Pfam
PF00060   Lig_chan        + More
PF10613   Lig_chan-Glu_bd
PF00246   Peptidase_M14
Interpro
IPR001320   Iontro_rcpt        + More
IPR019594   Glu/Gly-bd       
IPR008969   CarboxyPept-like_regulatory       
IPR000834   Peptidase_M14       
IPR015567   Pept_M14B_carboxypept_D2       
SUPFAM
SSF49464   SSF49464       
PDB
5KUF     E-value=2.50165e-09,     Score=147

Ontologies

Topology

Length:
279
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
50.4214200000001
Exp number, first 60 AAs:
0.01107
Total prob of N-in:
0.24773
outside
1  -  126
TMhelix
127  -  149
inside
150  -  177
TMhelix
178  -  200
outside
201  -  279
 
 

Population Genetic Test Statistics

Pi
184.155627
Theta
174.691524
Tajima's D
0.544394
CLR
0
CSRT
0.526773661316934
Interpretation
Uncertain
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