Gene

KWMTBOMO13076

Annotation

hypothetical_protein_RR48_15076_[Papilio_machaon]

Location

Bomo_Chr22(-):7995150-7996693      View in EpiBrowser

Full name

GPN-loop GTPase 2       + More
Proteasome assembly chaperone 3      

Location in the cell

Cytoplasmic   Reliability : 2.032 Nuclear   Reliability : 2.153

CDS

ATGGATCTCCCAGATATTATGAAAAATTTGAAAATACAAAATTCTGAAGCCCCAAATAATTTATTTAAATCAGTGAGTGCTGAAATAGATGATGTCACTACTGATATAGTGATAGCAGAATGTAGTGATAAAGTGTTTTTAGTTGTATCTCAGTATCAAAAAATGGGAAGTATGCTAATGGTTGTCAGAGATCGAATCAACGGTCCTCATGGCATTGAAGATGTGTATTCAACAAAAGTTGTTTTTGGTGATTCAGGGGAAGAGCATCAAGCAGCAGCAAGATTCTTAGCTGAAACAGTAGATATATTATCAAAACCACTTTGCATTTTCATCAACTTAAGGTCATATGACATTGAAACACTGAAAGCTTGTAGAGATATCATTTTGGACTTCAAAAAAGAAGATACAGAATGTCAGCAATGA

Protein

MDLPDIMKNLKIQNSEAPNNLFKSVSAEIDDVTTDIVIAECSDKVFLVVSQYQKMGSMLMVVRDRINGPHGIEDVYSTKVVFGDSGEEHQAAARFLAETVDILSKPLCIFINLRSYDIETLKACRDIILDFKKEDTECQQ

Description

Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import.
Chaperone protein which promotes assembly of the 20S proteasome. May cooperate with psmg1-psmg2 heterodimers to orchestrate the correct assembly of proteasomes (By similarity).

Subunit

Binds to RNA polymerase II (RNAPII).

Similarity

Belongs to the GPN-loop GTPase family.
Belongs to the PSMG3 family.

Keywords

Chaperone   Complete proteome   Reference proteome  

Feature

chain  Proteasome assembly chaperone 3

Uniprot

A0A194R156   A0A194PWZ8   A0A232EZ49   A0A1Y1NHB4   A0A1B6L0I1   A0A0N0U5B6   + More
A0A0K8RH61   B7PJR2   A0A131YA39   A0A310S3X4   A0A293LP11   A0A088AH44   A0A1S3KEC3   A0A1S3HXR7   A0A1Z5L8J6   E9FTY8   A0A0P4Y224   A0A154PDL1   A0A0P6I3L1   A0A1E1WZN8   C3YZA5   H3AN86   A0A1S4EJT6   A0A060WX84   B5X7K7   A0A3P9AFJ1   A0A2G8JYH9   B5X5K2   A0A315V3M4   A0A2I4AIP8   Q6DGH7   A0A2C9LY96   A0A3B5A7Q1   A0A060WHM5   A0A0A0KUG9   A9NRF5   R7QMC1   A0A3P8X0A7   G3PM10   A0A3Q3B8L1   A0A096M830   A0A3B3VKQ5   A0A3B3WFG8   A0A1S3AUA3   M4A4F0   A0A3B5LM36   A0A084WBG0   A0A3B3SET4   A0A1X0RM75   A0A367J727   C3KK99   A0A124SHC7   A0A3P8THF7   A0A3Q1B5H2   W9SNR9   A0A182QW99   A0A3Q1GUP5   A0A3Q0R6P7   A0A182MXX7   A0A3Q1HCD0   A0A3Q3GJ18   G7J4Z4   W9RBM2   A0A0E9XHI8   A0A3Q4BXE8   A0A1J3CMK7   A7SP74   A0A3B5K109   A0A2N9J0B1   A0A182SZV2   A0A3Q0RAQ9   A0A182RFB9   A0A182JYW4   A0A1A7Z3G8   A0A178U9J1   Q9LER5   A0A182YDB9   A0A3B4V3L7   A0A3Q3KMR2   A0A2K3MVI8   A0A3Q3K9Y4   D7M6M2   R0HBD2  

Pubmed

26354079    28648823    28004739    28528879    21292972    28503490    + More
18563158    9215903    24755649    20433749    25069045    29023486    29703783    23594743    15562597    19881527    19495411    20565788    22047402    18854048    23503846    24487278    22753475    23542700    24438588    29240929    27956601    29674435    26786968    22089132    24767513    30397259    25613341    17615350    21551351    22223895    27354520    11130714    12093376    27862469    25244985    24500806    28382043    21478890    23749190   

EMBL

KQ460883    KPJ11437.1    KQ459586    KPI97847.1    NNAY01001524    OXU23694.1    + More
GEZM01005619    JAV96035.1    GEBQ01022765    JAT17212.1    KQ435794    KOX73978.1    GADI01003338    JAA70470.1    ABJB010201090    DS727794    EEC06834.1    GEFM01000486    JAP75310.1    KQ797310    OAD46961.1    GFWV01010508    MAA35237.1    GFJQ02003345    JAW03625.1    GL732524    EFX89448.1    GDIP01243022    JAI80379.1    KQ434879    KZC09943.1    GDIQ01026504    JAN68233.1    GFAC01006746    JAT92442.1    GG666566    EEN54176.1    AFYH01097916    FR904779    CDQ71617.1    BT047026    ACI66827.1    MRZV01001083    PIK40798.1    BT046321    BT125413    ACI66122.1    ADM16154.1    NHOQ01002357    PWA17712.1    BX908797    BC076368    BC165128    AAH76368.1    AAI65128.1    FR904459    CDQ64070.1    CM002926    KGN51386.1    EF083883    EF086424    ABK23216.1    HG002061    CDF39657.1    AYCK01008293    ATLV01022351    KE525331    KFB47554.1    KV921564    ORE13135.1    PJQL01002018    RCH85772.1    BT083364    ACQ59071.1    LEKV01001069    KVI09163.1    KE619967    EXC36383.1    AXCN02002113    CM001219    PSQE01000003    AES72307.1    RHN69456.1    KE343942    EXB48383.1    GBXM01007414    JAI01164.1    GEVI01023151    JAU09169.1    DS469729    OIVN01006293    SPD29940.1    HADW01004563    HADX01014766    SBP36998.1    LUHQ01000005    OAO89807.1    AY084903    BT005169    CP002688    AK117635    AL391149    AAM61466.1    AAO50702.1    AED92065.1    BAC42291.1    CAC01870.1    ASHM01012850    PNX94815.1    GL348718    EFH47886.1    KB870810    EOA22335.1   

Proteomes

UP000053240    UP000053268    UP000215335    UP000053105    UP000001555    UP000005203    + More
UP000085678    UP000000305    UP000076502    UP000001554    UP000008672    UP000079169    UP000193380    UP000087266    UP000265140    UP000230750    UP000192220    UP000000437    UP000076420    UP000261400    UP000029981    UP000012073    UP000265120    UP000007635    UP000264800    UP000028760    UP000261500    UP000261480    UP000089565    UP000002852    UP000261380    UP000030765    UP000261540    UP000242381    UP000252139    UP000243975    UP000265080    UP000257160    UP000030645    UP000075886    UP000257200    UP000261340    UP000075884    UP000265040    UP000261660    UP000002051    UP000265566    UP000261620    UP000001593    UP000005226    UP000075901    UP000075900    UP000075881    UP000078284    UP000006548    UP000076408    UP000261420    UP000261640    UP000236291    UP000261600    UP000008694    UP000029121   

Pfam

PF10178   PAC3        + More
PF03029   ATP_bind_1
PF13621   Cupin_8

Interpro

IPR018788   Proteasome_assmbl_chp_3        + More
IPR027417   P-loop_NTPase       
IPR030231   Gpn2       
IPR004130   Gpn       
IPR041667   Cupin_8       
IPR003347   JmjC_dom       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A194R156   A0A194PWZ8   A0A232EZ49   A0A1Y1NHB4   A0A1B6L0I1   A0A0N0U5B6   + More
A0A0K8RH61   B7PJR2   A0A131YA39   A0A310S3X4   A0A293LP11   A0A088AH44   A0A1S3KEC3   A0A1S3HXR7   A0A1Z5L8J6   E9FTY8   A0A0P4Y224   A0A154PDL1   A0A0P6I3L1   A0A1E1WZN8   C3YZA5   H3AN86   A0A1S4EJT6   A0A060WX84   B5X7K7   A0A3P9AFJ1   A0A2G8JYH9   B5X5K2   A0A315V3M4   A0A2I4AIP8   Q6DGH7   A0A2C9LY96   A0A3B5A7Q1   A0A060WHM5   A0A0A0KUG9   A9NRF5   R7QMC1   A0A3P8X0A7   G3PM10   A0A3Q3B8L1   A0A096M830   A0A3B3VKQ5   A0A3B3WFG8   A0A1S3AUA3   M4A4F0   A0A3B5LM36   A0A084WBG0   A0A3B3SET4   A0A1X0RM75   A0A367J727   C3KK99   A0A124SHC7   A0A3P8THF7   A0A3Q1B5H2   W9SNR9   A0A182QW99   A0A3Q1GUP5   A0A3Q0R6P7   A0A182MXX7   A0A3Q1HCD0   A0A3Q3GJ18   G7J4Z4   W9RBM2   A0A0E9XHI8   A0A3Q4BXE8   A0A1J3CMK7   A7SP74   A0A3B5K109   A0A2N9J0B1   A0A182SZV2   A0A3Q0RAQ9   A0A182RFB9   A0A182JYW4   A0A1A7Z3G8   A0A178U9J1   Q9LER5   A0A182YDB9   A0A3B4V3L7   A0A3Q3KMR2   A0A2K3MVI8   A0A3Q3K9Y4   D7M6M2   R0HBD2  

KEGG

101742797    no KO assigned | (RefSeq) WD repeat-containing protein 55 homolog

GO

GO:0016787   GO:0005525   GO:0000502   GO:0016706   GO:0000049   GO:0031591  

PANTHER

PTHR21231   PTHR21231:SF3  

Length:

140

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00587

Exp number, first 60 AAs:

0.00169

Total prob of N-in:

0.08849

outside

1  -  140

 

 

Pi

320.51899

Theta

215.297832

Tajima's D

1.268126

CLR

0

CSRT

0.728863556822159

Interpretation

Uncertain