SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13075  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000302
Annotation
PREDICTED:_constitutive_coactivator_of_PPAR-gamma-like_protein_1_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.092 Nuclear   Reliability : 1.552
 

Sequence

CDS
ATGGGCATACAAGACTTACAAACATTTTTAGAAAGTGAAGGTGTAGGTGTTGATCTCTTTAAAATTGCGAGAAACCATTCTGGAGGTTTGCGCCTGGTTCTCGACGCCGAAGGTTGTTTGGATCGTCTTTACGGTGGATACTTCTCAGATTGGGCAAGTGGTGGACAATGGGCCCGATGTGTACAGTTCTTAACAACACTAGCACAAGCTTTGGCTGAATTTCAAGTATCACTTTGTGTTTGTTTTAATGGATCTCATCCTACGCCTCCTGCATTACCCCAACATTGGATCCAGACTCAAACCATATATAAGCAAAGAGTGAATTCAGTTTTGCACCATATTACCACTAAAGGTACTCCACCACCTAAAGTATGGTGGGTACCACCTACTGGACTGCATTCATGTTTACGAACCGCACTTAGGTACCTCAATATCCCAATTATGGTGTCTTCTGATGATCACTGTCAGGAAGTTGTTGGTTTATGTCGTGAAAAATCATATGCTGGCCTCGTTGGATGCTCTGGAGAGTATTTAGTGTTTCAACCACCTAGATACTTTAGTTCATCTTTGTTGAAACTAACATATAGATCTTCACTAGAAACTAAAGAATATATGGTCCATGATTTGCCACAAGTACTTAATGTACCTCAAGATCGTCTTTGCCTCATGGCTGCATTACTTGGAGGAGTCATTCTTTCAGAACAAAGCTTGACAGATTTCTATAAACGCCTTGGATTAGTGCCCAAAAAGCAAGTTCCTCCAGAGATACAAATAAAAACAATTTGTCAGTATGTAAGTGAATTACCAACTTCTGATGTTGATGCAGTCTGCATAGATATATTTGGAGATCTGAATGACCTACGCGCTGCAAAACTTAAACAAGCCGTACAGTATTATCTAAACGGTACAAAGGATGGTTTCTTAAAATATAAAACAGCTACAGGTCGTCGTTCAAAAAATAAAAAGAATCTCCAAAGACAAGAATTCAACATGCAGCCTGTTACTCTGGATCTAGATACATCAAAATTAGCGACTGAATCGTCAGAACATGAGCAAAAAGGCTTGGAAGATTACAAATTGGCTACAGCAAATGCATCAATGAGTGCTGACTTTAGTATGGAGAAACAAACTAATGACTTACATCATGGATTCGCATCTCTATCACTTGAAGCTGGTGTTATGTCATCTACTAAGCAACAAAAACAGAATATTATCAAAAAAAAGGCTGAAAAACCACAATCTGCAATTAAAGAGGGGCGACAAGCTACAAAACAAGTCCAAAGTGATGACAACTGCCCTCCAGCACCGGCAGAAGTATTGCGGACCTGTGCGGAACGTCACACCAGGGGCCTCATGCATCCTCAACTTCTATCTATCCTTACACATCGTCAAGTGACTTTACCTGTGCTTATGGAGGATGAGAATCATAGAGAAATTCCTTCAATTCATCATTTCTTTAGACCAATTCGACAGAATGTATATGCTATTCTGTACAATATGCATCATCATCGCTTTATGGCCCACAAAATTAAAGATGATAGATCGAGTGGCTCTAATGATCGTCCATGCACAGTTTTGATAGCAGAATGGATATACACCCGCACAAATCCTGGCAAGAATCCAGAGATTGTTCCAGGTGTTTTACTGGATTGGCCTGTGCCAACTGTACAGAGGCTCTGGTTTGGAACTGCTCCGGATGATAAATGCCGTAGAATGAGAGCATATCTTTCCTGTATGCGCTCAGATACTCCTCTGATGTTGAATACTACTTATGTGCCCCAGCACTTGCTCATACTGGCAACTGTATTGAGATTTATAATGACATCTCCAATTCAAATACTACGAAGGCAAGAGCTGGATGCATTTTTAGCTACTGCATTTTCGACAGATCTTATGAATGCACTACATTTGCAAGAAATGAATATCAATGCTATCAGTTCCCGGGGCGTACAATTAGGCGCGCTGGTGATGGCGGGCGTGGAGGCGGCGCTCGTGGCTAATGACGCTTGCGGTGCTCCTGTACCATGGCTCGTAGCTTCACCCTGGCTCTACTTCGATGGCAAGCTGCTGCAGCGAAACCTCCATCGCGCAGCACACTGCAAACATCTTCCTCAGCTTTGCGATAACAACCTCGACATCGTCGTCAAGGTTGAGCGCATGCGAAAGGCGATCTTGGAAGGTCTGGAGGTGGAGTTCGCGATGGCGCCGCTGCCGCTCGTGGCGGGCGTGCTAGGGAGCGACGGGGGCACGTGGGGCGCGAGGGGGCGGGGCCGCGGCGGCCGGCTTGAGATCGCGGGCGTTGTCGTCGGACAGTGGGGCGGCGGCAGCTATCCCGCACGCGCTCCGCCCAGATACCAACAGATGAGCGCGCACACTGTGGGCTACGTTGGATACACGCCTCCGACTCGGAACTCGTACGGAGGTCGCGGGTGGCGCGGAGCACGCGGGGGTCGCGGCCGGGGACACGCGCGCCCCTCGCGCCGCCCCCGCCGGGACCCGAACGAGCCCGCCAAACCAGCCACTATTGCCGTTAATGGGAAAACCGTTCGCCCGGACGAAGTTCACCACCAGTCAGGTGAATCAAGTCCTCAAGATGAAAATACTGCTCAAGAAGGTGAAGCAGAAGGAACACCCACTCCTAAACCTAAAACTGGCAAGAATCTGAAGAAAAATGCAGGAAAGGGGAAAAAAAGGATCAATAAACCGGAAGGCTTGCAAGGAGCATCAGAGGCTAATGGACCGCTTGATAAAAATAAGGTGGCAGAGCAAGGCCACAGTTCCGACAAGGAACACATAGGGCAAGGTGATGCACCAGTCTCAAATTAA
Protein
MGIQDLQTFLESEGVGVDLFKIARNHSGGLRLVLDAEGCLDRLYGGYFSDWASGGQWARCVQFLTTLAQALAEFQVSLCVCFNGSHPTPPALPQHWIQTQTIYKQRVNSVLHHITTKGTPPPKVWWVPPTGLHSCLRTALRYLNIPIMVSSDDHCQEVVGLCREKSYAGLVGCSGEYLVFQPPRYFSSSLLKLTYRSSLETKEYMVHDLPQVLNVPQDRLCLMAALLGGVILSEQSLTDFYKRLGLVPKKQVPPEIQIKTICQYVSELPTSDVDAVCIDIFGDLNDLRAAKLKQAVQYYLNGTKDGFLKYKTATGRRSKNKKNLQRQEFNMQPVTLDLDTSKLATESSEHEQKGLEDYKLATANASMSADFSMEKQTNDLHHGFASLSLEAGVMSSTKQQKQNIIKKKAEKPQSAIKEGRQATKQVQSDDNCPPAPAEVLRTCAERHTRGLMHPQLLSILTHRQVTLPVLMEDENHREIPSIHHFFRPIRQNVYAILYNMHHHRFMAHKIKDDRSSGSNDRPCTVLIAEWIYTRTNPGKNPEIVPGVLLDWPVPTVQRLWFGTAPDDKCRRMRAYLSCMRSDTPLMLNTTYVPQHLLILATVLRFIMTSPIQILRRQELDAFLATAFSTDLMNALHLQEMNINAISSRGVQLGALVMAGVEAALVANDACGAPVPWLVASPWLYFDGKLLQRNLHRAAHCKHLPQLCDNNLDIVVKVERMRKAILEGLEVEFAMAPLPLVAGVLGSDGGTWGARGRGRGGRLEIAGVVVGQWGGGSYPARAPPRYQQMSAHTVGYVGYTPPTRNSYGGRGWRGARGGRGRGHARPSRRPRRDPNEPAKPATIAVNGKTVRPDEVHHQSGESSPQDENTAQEGEAEGTPTPKPKTGKNLKKNAGKGKKRINKPEGLQGASEANGPLDKNKVAEQGHSSDKEHIGQGDAPVSN

Summary

EMBL
BABH01013180    BABH01013181    BABH01013182    BABH01013183    ODYU01000339    SOQ34917.1    + More
KZ150009    PZC75120.1    KQ459586    KPI97850.1    RSAL01000111    RVE47107.1    GAIX01001118    JAA91442.1    NWSH01001742    PCG70268.1    KQ460883    KPJ11434.1    AGBW02010414    OWR48555.1    QOIP01000011    RLU16580.1    KQ435090    KZC14572.1    KK107105    EZA59549.1    KQ981693    KYN37806.1    GL453806    EFN75481.1    KQ414756    KOC61607.1    KQ982805    KYQ50499.1    KQ979182    KYN22307.1    GL888406    EGI61482.1    GBYB01004199    JAG73966.1    KQ977294    KYN03880.1    KQ976439    KYM86779.1    ADTU01018872    ADTU01018873    ADTU01018874    KZ288266    PBC30197.1    JR039984    JR039985    AEY58934.1    AEY58935.1    KQ435718    KOX78970.1    GL762838    EFZ20692.1    LBMM01000718    KMQ97652.1    GL440936    EFN65227.1    APGK01029502    APGK01029503    KB740735    KB631805    ENN79169.1    ERL86280.1    GEBQ01003953    JAT36024.1    GECU01017051    JAS90655.1    GEZM01055107    GEZM01055106    GEZM01055105    GEZM01055104    JAV73142.1    GEDC01031325    GEDC01028651    GEDC01022805    GEDC01016758    GEDC01013214    GEDC01005936    JAS05973.1    JAS08647.1    JAS14493.1    JAS20540.1    JAS24084.1    JAS31362.1    GEDC01030729    GEDC01022302    GEDC01007130    GEDC01006626    JAS06569.1    JAS14996.1    JAS30168.1    JAS30672.1    NNAY01002323    OXU21550.1    KQ971372    EFA09788.1    KK852801    KDR16324.1    DS235870    EEB19475.1    KQ760505    OAD60064.1    JH431178    GEFM01006766    JAP69030.1    GGLE01006873    MBY10999.1    GEGO01001889    JAR93515.1    GFTR01008487    JAW07939.1    GFWV01002524    MAA27254.1    GFJQ02008048    JAV98921.1    GBGD01000265    JAC88624.1    GBBI01004269    JAC14443.1    GEDC01020687    JAS16611.1    LRGB01000966    KZS14381.1    GDIP01181824    JAJ41578.1    GDIP01062386    JAM41329.1    GDIP01108931    JAL94783.1    GDIP01188074    JAJ35328.1    AAZX01001890    AAZX01009687    AAZX01019915    GDIQ01224449    JAK27276.1    GGMS01016557    MBY85760.1    GDIQ01071839    JAN22898.1    JH818358    EKC21787.1    GFXV01001724    MBW13529.1    KB203946    ESO82329.1    ABLF02034459    ABLF02034466    GFDF01011430    JAV02654.1    GFDF01011431    JAV02653.1    GFDF01011429    JAV02655.1    UFQS01000156    UFQT01000156    SSX00615.1    SSX20995.1    CVRI01000040    CRK95071.1    AMQN01002390    KB309044    ELT95705.1    LJIJ01000612    ODM95868.1   
Interpro
IPR026784   Coact_PPARg        + More
IPR029060   PIN-like_dom_sf       
SUPFAM
SSF88723   SSF88723       

Ontologies

Topology

Length:
941
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.19437
Exp number, first 60 AAs:
4e-05
Total prob of N-in:
0.00022
outside
1  -  941
 
 

Population Genetic Test Statistics

Pi
419.231118
Theta
198.091415
Tajima's D
3.050692
CLR
0.3437
CSRT
0.981350932453377
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27530593 REEMSEGLPKPHNPAEHDSESDGEYKA 100.00 3e-09
26822097 QEFNMQPVTIDIDTSK 100.00 2e-08
28556443 VTEVVLAAVYK 100.00 3e-07
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