Gene

KWMTBOMO13072  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000397

Annotation

RGS-GAIP_interacting_protein_GIPC_[Bombyx_mori]

Location

Bomo_Chr22(-):7943358-7958433      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.185 Nuclear   Reliability : 1.582

CDS

ATGTCGTTATTTAAAAAGAAAGCGCCTAAATACACGCCGCCACCGGTACCACCCACACCAGTAGAAGATACTGAATCACAGTCTAATGGAGTCGATAATAGCAACGGTACGCAGAAGTCACAACTGGTCTTCCACTGTCAGCAAGCTCACGGAAGTCCATTGGGCCTCATCTCTGGTTTCTCTAACGTCAAAGAATTATATGAGAAGATAGCAGAATGTTACGAATTTTCACCCGAAGATATTCTTTTCTGTACTTTAAATACTCACAAAGTGGATATGAAAAAACTTCTCGGAGGGCAAATAGGATTAGAAGACTTTATTTTCGCGCATAGAAAAGGTCGACCAAAGGAAATAGAAATAGTTAAAACAGAAGATGCTCTAGGATTAACGATTACAGATAACGGAGCAGGTTATGCATTTATAAAAAGGATTAAAGAAGGCTCCATTGTTTCAAGAATACCACATATTGAGGTCGGAGATCATATTGAGAAATTGAATGGTGAGAATATGGTTGGGAAAAGACATTATGAGGTGGCGAAAATTCTGAAAGACATACCGAAGGGAACCACTTTTATAATGCGATTGGTGGAACCATTGAAGAGTGGATTCGGTAGCATCGGTCCTAAAACCGGTAGTGGGAGGTCAGGAAAAAAACAAAACTTTGGCTCAGGAAAAGAAACTCTACGTTTTAAAGCGAATGGCCAAGCAACAATTGAAAATGAGCACGATGACAAATCAAAGGCTGGAATTGAAAAAATCAACGGTCTACTGGAATCATTTATGGGTATCAATGATAGTGAATTGGCATCGCAAATGTGGGATCTTGCCGAAGGAAAACAAAATTCTATGGAACTCGCAGAGGCTATCGATAACAGCGATCTTCAAGAATTTGGTTTTACAGATGAATTTATCATTGAACTATGGGGAGTTATAACTGATGCTAGATCTGGAAGACTCAGTTAG

Protein

MSLFKKKAPKYTPPPVPPTPVEDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDILFCTLNTHKVDMKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILKDIPKGTTFIMRLVEPLKSGFGSIGPKTGSGRSGKKQNFGSGKETLRFKANGQATIENEHDDKSKAGIEKINGLLESFMGINDSELASQMWDLAEGKQNSMELAEAIDNSDLQEFGFTDEFIIELWGVITDARSGRLS

Uniprot

Q2F696   A0A1E1WHH9   A0A3S2L716   A0A212F496   A0A2W1BTQ8   A0A194R1P4   + More
S4PGM5   H9IT18   A0A0L7KUY4   A0A0N7Z9V8   A0A194PYL8   A0A0K8TKE9   A0A182Q4W4   A0A182XZF0   A0A2M4AHP5   A0A2M4AGQ8   A0A182UV85   Q7QJV3   D6X0C9   A0A034VY92   A0A023EQA6   A0A1B0CMS5   A0A1Q3G5A1   T1E9Z3   A0A1Q3G5C2   A0A336M7P8   A0A0A1XCS0   A0A2M4CRK6   A0A2M4BSI6   A0A1L8DMA5   A0A2M4CRN3   W8BJF0   A0A2M3Z208   V5GRE7   A0A182IJL8   E9HF44   A0A084VF71   A0A0P5YJ64   A0A1S3DUX0   A0A2H1V422   A0A1Y1KAR2   A0A1L8DM09   A0A0J9R825   Q7JX82   B4HRK6   A0A0P6JS04   B4NMR5   B4P2P1   B3N8T6   A0A1J1J3W2   A0A1W4VYY5   A0A1J1J6L5   B4KNW1   B3MGT9   B4GGM9   Q28ZX6   A0A3Q0II38   A0A3Q0INK3   A0A3B0J282   T1PBJ3   A0A026W172   E2C237   A0A1B6EAC6   A0A1A9V8H2   A0A1B0FQG0   A0A1A9Z5J2   A0A1B0BV49   A0A1A9WP09   A0A1B6LBY5   B4J8C4   A0A1A9XB70   A0A158NUJ8   A0A0M5J337   B4LJN2   A0A1I8PYU9   T1I230   A0A224XSQ1   J3JVI6   A0A1B6FM06   A0A023F3Y3   A0A2H8TLD2   C4WSV7   A0A087U047   A0A146L901   A0A146KSW3   A0A0N0U608   A0A151X6L2   J9JKJ2   A0A2L2Y1Q7   A0A2S2Q945   A0A195C9C2   E2A382   A0A0P4VNI6   A0A195FIY5   C1C1V8   A0A087ZSQ2   A0A151J2S6   A0A0K2V9I6   A0A0K2V8F8   A0A2A3EEJ6  

Pubmed

22118469    28756777    26354079    23622113    19121390    26227816    + More
26369729    25244985    12364791    14747013    17210077    18362917    19820115    25348373    24945155    25830018    24495485    21292972    24438588    28004739    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    26999592    17550304    18057021    15632085    23185243    25315136    24508170    30249741    20798317    21347285    22516182    25474469    26823975    26561354    27129103   

EMBL

DQ311176    ABD36121.1    GDQN01004733    GDQN01004107    JAT86321.1    JAT86947.1    + More
RSAL01000111    RVE47111.1    AGBW02010414    OWR48551.1    KZ150009    PZC75123.1    KQ460883    KPJ11439.1    GAIX01006145    JAA86415.1    BABH01013185    JTDY01005372    KOB67067.1    GDRN01109108    JAI57128.1    KQ459586    KPI97844.1    GDAI01002844    JAI14759.1    AXCN02000591    GGFK01006994    MBW40315.1    GGFK01006648    MBW39969.1    AAAB01008807    EAA04121.4    EDO64513.1    KQ971372    EFA09593.1    GAKP01012120    GAKP01012117    GAKP01012116    JAC46835.1    GAPW01002348    JAC11250.1    AJWK01019146    GFDL01000070    JAV34975.1    GAMD01000867    JAB00724.1    GFDL01000076    JAV34969.1    UFQT01000518    SSX24899.1    GBXI01012033    GBXI01006379    GBXI01006039    JAD02259.1    JAD07913.1    JAD08253.1    GGFL01003786    MBW67964.1    GGFJ01006831    MBW55972.1    GFDF01006587    JAV07497.1    GGFL01003785    MBW67963.1    GAMC01009435    GAMC01009434    GAMC01009433    GAMC01009432    JAB97123.1    GGFM01001816    MBW22567.1    GALX01004284    JAB64182.1    GL732633    EFX69627.1    ATLV01012364    KE524785    KFB36615.1    GDIP01057001    LRGB01003375    JAM46714.1    KZS03021.1    ODYU01000396    SOQ35112.1    GEZM01087696    JAV58529.1    GFDF01006586    JAV07498.1    CM002911    KMY92216.1    AE013599    AY060451    AY095011    AAF59122.1    AAF59123.1    AAF59124.1    AAG22301.1    AAL25490.1    AAM11339.1    AHN55985.1    CH480816    EDW46888.1    GDUN01000806    JAN95113.1    CH964282    EDW85654.1    CM000157    EDW89302.1    KRJ98359.1    KRJ98360.1    CH954177    EDV59563.1    CVRI01000070    CRL07125.1    CRL07126.1    CH933808    EDW09006.1    KRG04418.1    KRG04419.1    CH902619    EDV37857.1    KPU77059.1    KPU77060.1    CH479183    EDW35649.1    CM000071    EAL25486.2    KRT02266.1    KRT02267.1    KRT02268.1    KRT02269.1    OUUW01000001    SPP75227.1    KA646132    AFP60761.1    KK107496    QOIP01000004    EZA49812.1    RLU24089.1    GL452067    EFN77988.1    GEDC01002419    JAS34879.1    CCAG010008865    JXJN01021141    GEBQ01018772    JAT21205.1    CH916367    EDW02283.1    ADTU01026585    CP012524    ALC42468.1    CH940648    EDW61600.1    ACPB03000298    GFTR01004956    JAW11470.1    BT127254    AEE62216.1    GECZ01018533    JAS51236.1    GBBI01002552    JAC16160.1    GFXV01002677    MBW14482.1    AK340352    BAH70977.1    KK117538    KFM70736.1    GDHC01013775    JAQ04854.1    GDHC01019211    GDHC01015116    JAP99417.1    JAQ03513.1    KQ435760    KOX75574.1    KQ982481    KYQ55997.1    ABLF02024065    ABLF02024069    ABLF02024070    ABLF02043444    IAAA01005079    LAA01230.1    GGMS01005050    MBY74253.1    KQ978143    KYM96713.1    GL436311    EFN72110.1    GDKW01003271    JAI53324.1    KQ981522    KYN40625.1    BT080837    ACO15261.1    KQ980368    KYN16330.1    HACA01029461    CDW46822.1    HACA01029462    CDW46823.1    KZ288266    PBC30157.1   

Proteomes

UP000283053    UP000007151    UP000053240    UP000005204    UP000037510    UP000053268    + More
UP000075886    UP000076408    UP000075903    UP000007062    UP000007266    UP000092461    UP000075880    UP000000305    UP000030765    UP000076858    UP000079169    UP000000803    UP000001292    UP000007798    UP000002282    UP000008711    UP000183832    UP000192221    UP000009192    UP000007801    UP000008744    UP000001819    UP000268350    UP000095301    UP000053097    UP000279307    UP000008237    UP000078200    UP000092444    UP000092445    UP000092460    UP000091820    UP000001070    UP000092443    UP000005205    UP000092553    UP000008792    UP000095300    UP000015103    UP000054359    UP000053105    UP000075809    UP000007819    UP000078542    UP000000311    UP000078541    UP000005203    UP000078492    UP000242457   

PRIDE

Q2F696    H9IT18    Q7JX82   

Pfam

PF00595   PDZ        + More
PF01144   CoA_trans

Interpro

IPR036034   PDZ_sf        + More
IPR017379   GIPC1/2/3       
IPR001478   PDZ       
IPR012792   3-oxoacid_CoA-transf_A       
IPR004165   CoA_trans_fam_I       
IPR004163   CoA_transf_BS       
IPR037171   NagB/RpiA_transferase-like       
IPR004164   CoA_transf_AS       

SUPFAM

SSF50156   SSF50156        + More
SSF100950   SSF100950       

ProteinModelPortal

Q2F696   A0A1E1WHH9   A0A3S2L716   A0A212F496   A0A2W1BTQ8   A0A194R1P4   + More
S4PGM5   H9IT18   A0A0L7KUY4   A0A0N7Z9V8   A0A194PYL8   A0A0K8TKE9   A0A182Q4W4   A0A182XZF0   A0A2M4AHP5   A0A2M4AGQ8   A0A182UV85   Q7QJV3   D6X0C9   A0A034VY92   A0A023EQA6   A0A1B0CMS5   A0A1Q3G5A1   T1E9Z3   A0A1Q3G5C2   A0A336M7P8   A0A0A1XCS0   A0A2M4CRK6   A0A2M4BSI6   A0A1L8DMA5   A0A2M4CRN3   W8BJF0   A0A2M3Z208   V5GRE7   A0A182IJL8   E9HF44   A0A084VF71   A0A0P5YJ64   A0A1S3DUX0   A0A2H1V422   A0A1Y1KAR2   A0A1L8DM09   A0A0J9R825   Q7JX82   B4HRK6   A0A0P6JS04   B4NMR5   B4P2P1   B3N8T6   A0A1J1J3W2   A0A1W4VYY5   A0A1J1J6L5   B4KNW1   B3MGT9   B4GGM9   Q28ZX6   A0A3Q0II38   A0A3Q0INK3   A0A3B0J282   T1PBJ3   A0A026W172   E2C237   A0A1B6EAC6   A0A1A9V8H2   A0A1B0FQG0   A0A1A9Z5J2   A0A1B0BV49   A0A1A9WP09   A0A1B6LBY5   B4J8C4   A0A1A9XB70   A0A158NUJ8   A0A0M5J337   B4LJN2   A0A1I8PYU9   T1I230   A0A224XSQ1   J3JVI6   A0A1B6FM06   A0A023F3Y3   A0A2H8TLD2   C4WSV7   A0A087U047   A0A146L901   A0A146KSW3   A0A0N0U608   A0A151X6L2   J9JKJ2   A0A2L2Y1Q7   A0A2S2Q945   A0A195C9C2   E2A382   A0A0P4VNI6   A0A195FIY5   C1C1V8   A0A087ZSQ2   A0A151J2S6   A0A0K2V9I6   A0A0K2V8F8   A0A2A3EEJ6  

PDB

5V6T     E-value=3.87838e-86,     Score=810

KEGG

692815    K20056 PDZ domain-containing protein GIPC | (RefSeq) RGS-GAIP interacting protein GIPC

GO

GO:0001965   GO:0008045   GO:0001736   GO:0031982   GO:0008410   GO:0005515   GO:0046952   GO:0006412   GO:0019843   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

PANTHER

PTHR12259   PTHR13707  

Length:

320

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000670000000000001

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.02980

outside

1  -  320

 

 

Pi

240.590707

Theta

164.647623

Tajima's D

1.023044

CLR

0.220575

CSRT

0.667816609169542

Interpretation

Uncertain