SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13069
Annotation
Uncharacterized_protein_OBRU01_25407_[Operophtera_brumata]
Location in the cell
Mitochondrial   Reliability : 1.27 Nuclear   Reliability : 1.832
 

Sequence

CDS
ATGTCTTCTTCAAGTTCTAAATTAGTTTTAGGTCTTTCCTGTTCTATAACAATAGGGATTGTGTCATATGTTCACCTAAAGCAGCAAGCCGACAGGGAAAAGATGCATGAAGGAGTAGTGAGAGATATGGAACGGCAACAAAAGAGAAAGATAGAAAATTTATACCTTTTGGAGAAACAAAATGAACTAACAAAAAAGTTAAAAAGAGAATTAGGTAGTTAG
Protein
MSSSSSKLVLGLSCSITIGIVSYVHLKQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLKRELGS

Summary

EMBL
ODYU01000396    SOQ35109.1    KZ150009    PZC75128.1    JTDY01009527    KOB63360.1    + More
GDQN01006060    JAT84994.1    KQ459586    KPI97840.1    KQ460883    KPJ11443.1    AGBW02010128    OWR49115.1    DS231993    EDS30827.1    GFDL01008302    JAV26743.1    GFDL01008314    JAV26731.1    PYGN01000164    PSN52360.1    AJVK01021358    CH477423    EAT41206.1    GAPW01006650    JAC06948.1    JXUM01088824    GAPW01006648    KQ563727    JAC06950.1    KXJ73434.1    GAPW01006649    JAC06949.1    JRES01000536    KNC30358.1    KK852908    KDR13972.1    NEVH01015827    PNF26523.1    AJWK01006688    GFDF01002014    JAV12070.1    AAZX01008580    GL448819    EFN83763.1    CCAG010003108    QOIP01000009    RLU19092.1    NNAY01000950    OXU25767.1    KK107519    EZA49393.1    GFDF01002004    JAV12080.1    GDAI01001085    JAI16518.1    GGLE01000565    MBY04691.1    GFDF01001979    JAV12105.1    GDIQ01210027    JAK41698.1    GDIQ01134556    LRGB01000389    JAL17170.1    KZS19450.1    ADTU01001597    GDIP01031638    JAM72077.1    GL438685    EFN68606.1    GL732534    EFX84361.1    CH963857    EDW76140.1    GEFH01000627    JAP67954.1    CH902624    EDV33526.1    CH689311    CH480829    EDW45294.1    EDW45377.1    CM000361    CM002910    EDX03205.1    KMY87287.1    AE014134    AY119645    KX531932    AAF51513.1    AAM50299.1    ANY27742.1    CH954177    EDV57212.1    DS235100    EEB11993.1    KQ971372    EFA09804.1    CM000157    EDW87120.1    FJ821025    ACN94636.1    KQ982585    KYQ54354.1    CH379058    EAL34523.2    CH479184    EDW36869.1    CH933807    EDW11234.1    KQ977474    KYN02513.1    ABJB010467402    DS914679    EEC16937.1    GBBK01001424    JAC23058.1    GADI01004088    JAA69720.1    OUUW01000006    SPP81990.1    GBBM01006047    JAC29371.1    GBZX01003016    JAG89724.1    GBGD01003694    JAC85195.1    APGK01043502    KB741014    KB632293    ENN75498.1    ERL91614.1    CH916368    EDW03989.1    CP012523    ALC38763.1    GFAC01007612    JAT91576.1    GBBL01000865    JAC26455.1    GFTR01000343    JAW16083.1    AMQM01009101    KB095946    ESO09639.1    GBIH01000303    JAC94407.1    GDKW01003045    JAI53550.1    ACPB03020978    GECL01000957    JAP05167.1    CH940649    EDW64036.1    KQ980612    KYN15106.1    KK854209    PTY13126.1    GBBI01004272    JAC14440.1    CVRI01000006    CRK88117.1    AKHW03003332    KYO34778.1    FR904289    CDQ57568.1    HACG01022802    CEK69667.1    JW881026    AFP13543.1    CM004474    OCT79792.1    KE346369    KJE95346.1   
Pfam
PF15786   PET117
Interpro
IPR031568   Pet117       

Ontologies

Topology

Length:
73
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
15.61191
Exp number, first 60 AAs:
15.61191
Total prob of N-in:
0.23771
POSSIBLE N-term signal
sequence
outside
1  -  3
TMhelix
4  -  26
inside
27  -  73
 
 

Population Genetic Test Statistics

Pi
255.27246
Theta
188.587363
Tajima's D
0.939744
CLR
0.000034
CSRT
0.635118244087796
Interpretation
Uncertain
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