Silkworm Genome Informatics Database

Gene

KWMTBOMO13056 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000404

Annotation

hypothetical_protein_RR46_10949_[Papilio_xuthus]

Location

Bomo_Chr22(-):7450589-7474399 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.203

CDS

ATGAAGGTACAAGCGCGGAAGCTATTTGCGCATCGTGAGGGCTGTGAAGTGATTCTTGGAAAGGCAGATGATCAACTCACTAAGAGCCGTCAAGACTACCGGGCGGCGTTCCTGACCTACTGCAACAGTCCGAATTCAGCTGCTTTGGCCACTTACTATGATTCACACAACAATTATGTGCAGCAATTAACCGCTACAAACGCGATGCTTGAACAATATCACAAACATACTCTGCCTACTATACTACAGGAGCTGGAAGAGATTCTAACTGAAGTTACAACTGCTGTAAGTGACGCAATTTGCCAAGGAGGAGAAATTATAACTGAAAAGTGTAACACCCAATTGCGTCGCTATGAGTCTTTGTGTGCTCAAGCTCGTGCCGTATCCAGTACTGCTGATCTGGCGCATTTAGCCCGTACACTGCTGACCGCACAGCCACCAATGAAGCCGCCGAAGCGGGCTTTCCTGCCGCCTTACCCGCCAGAACCTGACGACCCGCCACTGGACGTTCCAGCGGAGAGCATGCCTCCAGTTCTGCGTGAAGAAATGCTTCTGGATCGCATGGCTGGTGGACAGGCCCGACTGAGCTATGAACAGCTTAGAAAAGACGCTCAAGATCTCGAAACCCAAATCAAACTCTTACAGGATGGCTTGGACTCTTTAGCCCGTCACCAGAATAGAGGACTCGAAAATAGTGTCTACAGTAAAGTCAATGAAATACAAGAGGATATGTCAATAAAGAAATATGAATACAGGGCGACGCAACTCCATCTTGCGGCTGTAAGAGCTCAGGGGCATGTTGAGATCCAGTTGAACAGATCAATTTTGTTAATTGTTATAGACGCAGTTGCTAAGAAGATGAATAAGAAAAATGGATATCAATCTGACGATGATAACATAAGATACAAGCTTAATACTCAATACTTCAATAATAATTTAAAATCCCCTAACAAACATAAAAAAGAGAAACAGAAAATTATTGATGATGATGAAGTTCGCTACAAATTTCCAACAGTACTAAATAGGACAAAACCAGCTGAGAATAAACCAAAACCCAAACAAAAAATTAAAGTCAATTTCTGGAGTAACAAACAAACCAGTAACCGATTACACAATGTGGATCCAAAAAGCAAAACAAACAGACGACACACAGTGGGCGCACCAAACCTGGATAAAAGTGATAAAGTGGTCAAAGTACGTAAACGGGTGTCATTTTTACCATCACCAATATTTTCTGAAAACCATATACCAATGGTAACTGTGCCAGATGACTTAACCATACAACTTAATGAAGAAGAAGCCAATGACTTAGGTGAAGATTTAAACCAAGCGTTTGTCAACAATGGGACTAAGGTTTCTAAGAGAAAGTCTTTAAATTCAGAAAACCAAATGAGTACAAAGCATAAAAAGAAGCAAGATTCAGAACCTCGAATCCAGGGCAATGAAACTGAATTAGAATTTTTCTCAAAGTATGTTGTACAAAAACTTAGAAAAATGGAAACTAATCAGCGTATTTATTCAGAGAATTTAATAAACACTGTATTAATGTTGGGACAGCTTGGAAAATTGAATGGAAAGTCAAAGATAGCTGAAGTATAA

Protein

MKVQARKLFAHREGCEVILGKADDQLTKSRQDYRAAFLTYCNSPNSAALATYYDSHNNYVQQLTATNAMLEQYHKHTLPTILQELEEILTEVTTAVSDAICQGGEIITEKCNTQLRRYESLCAQARAVSSTADLAHLARTLLTAQPPMKPPKRAFLPPYPPEPDDPPLDVPAESMPPVLREEMLLDRMAGGQARLSYEQLRKDAQDLETQIKLLQDGLDSLARHQNRGLENSVYSKVNEIQEDMSIKKYEYRATQLHLAAVRAQGHVEIQLNRSILLIVIDAVAKKMNKKNGYQSDDDNIRYKLNTQYFNNNLKSPNKHKKEKQKIIDDDEVRYKFPTVLNRTKPAENKPKPKQKIKVNFWSNKQTSNRLHNVDPKSKTNRRHTVGAPNLDKSDKVVKVRKRVSFLPSPIFSENHIPMVTVPDDLTIQLNEEEANDLGEDLNQAFVNNGTKVSKRKSLNSENQMSTKHKKKQDSEPRIQGNETELEFFSKYVVQKLRKMETNQRIYSENLINTVLMLGQLGKLNGKSKIAEV

Uniprot

H9IT25 A0A194PXS5 A0A194R1Q7

Pubmed

19121390 26354079

EMBL

BABH01013223 BABH01013224 BABH01013225 BABH01013226 BABH01013227 KQ459586 + More
KPI97828.1 KQ460883 KPJ11454.1

Proteomes

UP000005204 UP000053268 UP000053240

PRIDE

H9IT25

Interpro

IPR027267 AH/BAR_dom_sf

SUPFAM

SSF103657 SSF103657

Gene 3D

1.20.1270.60

ProteinModelPortal

H9IT25 A0A194PXS5 A0A194R1Q7

KEGG

101741686 no KO assigned | (RefSeq) uncharacterized LOC101741686

GO

Length:

532

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02347

Exp number, first 60 AAs:

0.01943

Total prob of N-in:

0.00423

outside

1 - 532

Pi

302.478791

Theta

205.667128

Tajima's D

1.639461

CLR

0.349629

CSRT

0.820558972051397

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics