Gene

KWMTBOMO13050  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000412

Annotation

PREDICTED:_THUMP_domain-containing_protein_1_[Amyelois_transitella]

Location

Bomo_Chr22(-):7293291-7294339      View in EpiBrowser

Full name

THUMP domain-containing protein 1 homolog      

Location in the cell

Nuclear   Reliability : 4.307

CDS

ATGGGTGACACGAGGAAAAAGAAGAAATTTTACTTTAGGAAACGAAGAAACAAATATTTCTTAGAACCCGGCTTCAAGGGCTTCTTTTGCACGTGTAACTTTAGAGAAAAAGACTGCGTCAAAGAAGTATATAATCTTCTGAACGAATATGCCAGTAAACTCTACCCAGATTTAGATGTGGAGCAAGTTCCACCGTCTGCAGTACCTGAGTCAGACGCTCCCGAGGATAGGTCCGAGAGCGAGTCTGAAGATGAGACTGATATTGGAGACATACTAAGAAGGGAAGTGGATTCAATAAAAAAAAATTCGCAGAAATCTTTACGGTTTAAAAGATTTCAAGTGGTTGAAACGGGTGCATCAAATTGTATCTTTGTTAAAACCAATTTACCTAGTCCAGAGGAACTGACCACCGCCATTATAAAAGACCTAATCGCTACACGAATTCAGAAAACCAGACATGTGATGCGACTGCTTCCAATAATGATTACTTGTAAAGCAAACCTTCCGGACATAATGGAAAGCGCTGGAAAACTTTTTGATAAGTATTTCTTAAAAGAACCAACTAGCTTTTCTGTAGTTTTCAACAAAAGATTCAATAACAGTGTATCCCGAGACTTGATCATCAAAGAGCTTGCGGAATTAGTAGTTGTAAAAAACAGGGAGAACAAAGCTGACCTCAAAAATCCAGGTCTCTGCATTATAGTTGAAGTTATTAAAGGAATGTGCTTGCTGAGTATTGTTGATAACTACTTTACTTATAAAAAATATAATCTTAATGAAATATGCAAGGAAGAATCAAATGATTCTGAAGAATCACAGGCAAAAAAATTCAAGAGTAGCTTGAACTGTGAAACTGAGGAACAGAATACTCAATAA

Protein

MGDTRKKKKFYFRKRRNKYFLEPGFKGFFCTCNFREKDCVKEVYNLLNEYASKLYPDLDVEQVPPSAVPESDAPEDRSESESEDETDIGDILRREVDSIKKNSQKSLRFKRFQVVETGASNCIFVKTNLPSPEELTTAIIKDLIATRIQKTRHVMRLLPIMITCKANLPDIMESAGKLFDKYFLKEPTSFSVVFNKRFNNSVSRDLIIKELAELVVVKNRENKADLKNPGLCIIVEVIKGMCLLSIVDNYFTYKKYNLNEICKEESNDSEESQAKKFKSSLNCETEEQNTQ

Similarity

Belongs to the THUMPD1 family.

Keywords

Complete proteome   Phosphoprotein   Reference proteome   RNA-binding  

Feature

chain  THUMP domain-containing protein 1 homolog

Uniprot

H9IT33   A0A2W1C4E8   A0A2H1VSB3   A0A0L7LBJ0   A0A194PYJ3   A0A194R181   + More
A0A212FAK8   A0A3S2M961   S4PYB7   A0A1I8NN75   A0A0L0C493   A0A034VDF2   A0A1I8MWH9   W8B5U4   A0A067QQ67   A0A0N0BIX9   A0A2A3EI37   A0A088ATX5   Q17HE7   A0A1Q3EX62   A0A023END1   A0A151JYF6   A0A026WAX0   A0A154PAT8   A0A1Q3EYF1   A0A0J7KH86   A0A182RB18   B0WIA0   A0A195CU09   A0A2J7RR09   A0A182XZC3   A0A0L7QPR6   A0A182NHC4   B4L0C9   A0A084VF62   E9J3G7   A0A182QPR4   A0A151JPJ5   E2BDM7   A0A182MV65   A0A1B0GP11   B4PHU4   A0A182J699   A0A182WIY7   A0A1L8DCB8   A0A182X6L1   A0A1B0CTF9   A0A182I3W0   A0A158NVS8   A0A182KS06   A0A182VH56   A0A151WGB9   Q7QJX0   A0A182TDZ8   A0A1B6HT08   B4J2Q4   Q9VZD8   B4LGI5   B4HU51   A0A182PA06   B3NC26   A0A336M2M4   A0A1B6GHR4   A0A336MYQ5   A0A3B0JZG7   A0A182JTW1   A0A2P8Y591   A0A1B6L819   A0A2M4CIS3   A0A0M4E944   Q2LZ85   A0A2M3ZJN4   A0A2M4ATN7   A0A2M3ZCX7   A0A1J1IRL4   B4N4B0   A0A2M3ZCK2   A0A2M4ATA4   B3M916   A0A1Y1KZB2   A0A1A9ZF01   A0A1W4VP98   A0A2M4CIP5   A0A1B0G325   A0A1A9ULW6   D6WGN0   A0A2M4BV30   A0A2M4BV20   A0A0C9QP96   A0A2M4BUW9   B4QQK4   A0A0J9RNX7   A0A1B0B5G0   A0A1B0BRB4   A0A182TCF9   A0A224XRE6   A0A182FG27   A0A069DRC9   F4WQL8  

Pubmed

19121390    28756777    26227816    26354079    22118469    23622113    + More
26108605    25348373    25315136    24495485    24845553    17510324    24945155    24508170    30249741    25244985    17994087    24438588    21282665    20798317    17550304    21347285    20966253    12364791    14747013    17210077    10731132    12537572    12537569    17372656    18327897    29403074    15632085    28004739    18362917    19820115    22936249    26334808    21719571   

EMBL

BABH01013271    KZ149892    PZC79033.1    ODYU01004146    SOQ43707.1    JTDY01001798    + More
KOB72853.1    KQ459586    KPI97819.1    KQ460883    KPJ11462.1    AGBW02009463    OWR50758.1    RSAL01000005    RVE54358.1    GAIX01003568    JAA88992.1    JRES01000997    KNC26289.1    GAKP01019369    GAKP01019366    JAC39583.1    GAMC01012603    JAB93952.1    KK853064    KDR11885.1    KQ435724    KOX78381.1    KZ288255    PBC30671.1    CH477250    EAT46059.1    GFDL01015165    JAV19880.1    GAPW01002686    JAC10912.1    KQ981475    KYN41472.1    KK107348    QOIP01000010    EZA52159.1    RLU17892.1    KQ434846    KZC08338.1    GFDL01014725    JAV20320.1    LBMM01007629    KMQ89566.1    DS231945    EDS28326.1    KQ977279    KYN04007.1    NEVH01000613    PNF43257.1    KQ414806    KOC60627.1    CH933809    EDW18075.1    ATLV01012362    KE524785    KFB36606.1    GL768066    EFZ12611.1    AXCN02000896    KQ978733    KYN28909.1    GL447678    EFN86189.1    AXCM01001459    AJVK01014911    CM000159    EDW93403.2    GFDF01010059    JAV04025.1    AJWK01027564    APCN01000225    ADTU01027466    KQ983178    KYQ46886.1    AAAB01008807    EAA04205.3    GECU01029917    JAS77789.1    CH916366    EDV96045.1    AE014296    AY118476    CH940647    EDW69423.2    CH480817    EDW50472.1    CH954178    EDV50914.2    UFQS01000450    UFQT01000450    SSX04141.1    SSX24506.1    GECZ01007802    JAS61967.1    UFQS01001558    UFQT01001558    SSX11441.1    SSX31008.1    OUUW01000012    SPP87477.1    PYGN01000910    PSN39423.1    GEBQ01020226    JAT19751.1    GGFL01001025    MBW65203.1    CP012525    ALC43541.1    CH379069    EAL29623.3    GGFM01007972    MBW28723.1    GGFK01010835    MBW44156.1    GGFM01005559    MBW26310.1    CVRI01000057    CRL02196.1    CH964095    EDW78984.1    GGFM01005535    MBW26286.1    GGFK01010705    MBW44026.1    CH902618    EDV38960.2    GEZM01075170    JAV64227.1    GGFL01001026    MBW65204.1    CCAG010009842    KQ971321    EFA00591.1    GGFJ01007713    MBW56854.1    GGFJ01007712    MBW56853.1    GBYB01002506    GBYB01002507    JAG72273.1    JAG72274.1    GGFJ01007714    MBW56855.1    CM000363    EDX09210.1    CM002912    KMY97573.1    JXJN01008695    JXJN01019030    GFTR01004038    JAW12388.1    GBGD01002687    JAC86202.1    GL888274    EGI63508.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000007151    UP000283053    + More
UP000095300    UP000037069    UP000095301    UP000027135    UP000053105    UP000242457    UP000005203    UP000008820    UP000078541    UP000053097    UP000279307    UP000076502    UP000036403    UP000075900    UP000002320    UP000078542    UP000235965    UP000076408    UP000053825    UP000075884    UP000009192    UP000030765    UP000075886    UP000078492    UP000008237    UP000075883    UP000092462    UP000002282    UP000075880    UP000075920    UP000076407    UP000092461    UP000075840    UP000005205    UP000075882    UP000075903    UP000075809    UP000007062    UP000075902    UP000001070    UP000000803    UP000008792    UP000001292    UP000075885    UP000008711    UP000268350    UP000075881    UP000245037    UP000092553    UP000001819    UP000183832    UP000007798    UP000007801    UP000092445    UP000192221    UP000092444    UP000078200    UP000007266    UP000000304    UP000092460    UP000075901    UP000069272    UP000007755   

PRIDE

H9IT33    Q9VZD8   

Pfam

PF02926   THUMP        + More
PF00685   Sulfotransfer_1

Interpro

IPR040183   THUMPD1-like        + More
IPR004114   THUMP_dom       
IPR027417   P-loop_NTPase       
IPR000863   Sulfotransferase_dom       

SUPFAM

SSF52540   SSF52540       

CDD

cd11717  THUMP_THUMPD1_like

ProteinModelPortal

H9IT33   A0A2W1C4E8   A0A2H1VSB3   A0A0L7LBJ0   A0A194PYJ3   A0A194R181   + More
A0A212FAK8   A0A3S2M961   S4PYB7   A0A1I8NN75   A0A0L0C493   A0A034VDF2   A0A1I8MWH9   W8B5U4   A0A067QQ67   A0A0N0BIX9   A0A2A3EI37   A0A088ATX5   Q17HE7   A0A1Q3EX62   A0A023END1   A0A151JYF6   A0A026WAX0   A0A154PAT8   A0A1Q3EYF1   A0A0J7KH86   A0A182RB18   B0WIA0   A0A195CU09   A0A2J7RR09   A0A182XZC3   A0A0L7QPR6   A0A182NHC4   B4L0C9   A0A084VF62   E9J3G7   A0A182QPR4   A0A151JPJ5   E2BDM7   A0A182MV65   A0A1B0GP11   B4PHU4   A0A182J699   A0A182WIY7   A0A1L8DCB8   A0A182X6L1   A0A1B0CTF9   A0A182I3W0   A0A158NVS8   A0A182KS06   A0A182VH56   A0A151WGB9   Q7QJX0   A0A182TDZ8   A0A1B6HT08   B4J2Q4   Q9VZD8   B4LGI5   B4HU51   A0A182PA06   B3NC26   A0A336M2M4   A0A1B6GHR4   A0A336MYQ5   A0A3B0JZG7   A0A182JTW1   A0A2P8Y591   A0A1B6L819   A0A2M4CIS3   A0A0M4E944   Q2LZ85   A0A2M3ZJN4   A0A2M4ATN7   A0A2M3ZCX7   A0A1J1IRL4   B4N4B0   A0A2M3ZCK2   A0A2M4ATA4   B3M916   A0A1Y1KZB2   A0A1A9ZF01   A0A1W4VP98   A0A2M4CIP5   A0A1B0G325   A0A1A9ULW6   D6WGN0   A0A2M4BV30   A0A2M4BV20   A0A0C9QP96   A0A2M4BUW9   B4QQK4   A0A0J9RNX7   A0A1B0B5G0   A0A1B0BRB4   A0A182TCF9   A0A224XRE6   A0A182FG27   A0A069DRC9   F4WQL8  

PDB

2DIR     E-value=4.75797e-10,     Score=153

KEGG

101739330    K06963 tRNA acetyltransferase TAN1 | (RefSeq) THUMP domain-containing protein 1 homolog

GO

GO:0003723   GO:0006400   GO:0016021   GO:0008146   GO:0005622   GO:0016668   GO:0045454   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

PANTHER

PTHR13452  

Length:

291

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.66906

Exp number, first 60 AAs:

0.00174

Total prob of N-in:

0.24115

outside

1  -  291

 

 

Pi

242.906144

Theta

202.093181

Tajima's D

0.634488

CLR

0.204346

CSRT

0.555772211389431

Interpretation

Uncertain