Gene

KWMTBOMO13044

Pre Gene Modal

BGIBMGA000414

Annotation

PREDICTED:_uncharacterized_protein_LOC106132394_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr22(-):7081877-7084471      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.149

CDS

ATGTCAGAAATAAAGTATAAAAATCAAATATTGGCAGCTATTGATCACTTGCGCGCCAGAAAGTCACGTCCAGATGCGAACAGAATTTGTAAATTTATGTTGAAGTGCTATAAAGTACAACCAAAGGACACAAAAGCAGATCTAAAGCGCTGCCTTAAAGAGAAAAGTATATATAAAGTAGATTATAAAGATAATGTGAGCTACAGGAACGCTGCTAAGTGGAGAAAGAAATCAAAAAACAACACCATGTCTGCTGCAATTGCAACAAGTGAACGCCGAATTATAACATCGGCTATAGCAACACTTATCTACCAAGATCAAAGTTATTTAGAAAATGGAATTGCCTTTGATGACCTTATAAAAGCTGCTTCTGATCAGGAATCAAAGTACTCCAAAAAACAATTGGAGAATATTGTAAACAAAGAATTAAGCTCTGGTAGTTTAGTGAAATTACCAAATGGTAATTTAGCTTTGGGACCAGCAGACCATGATGTAGATAGCTCTGATAGTTTTAGATTTGAGAGTAATGCAGATTCCAATACGAAAATGACGTCCTCAGCTAATTCTTCATGCAGATCATCTCCACAAAGAACTAGAGGACGGCCTAAAAAACGTGGTGGAGGTGTTTCTGGTGGGCATAGTAATAATACAACTCGCAGCACTGCAGTACGTGTAGGAGAACGACGAAAAATGGCAAAAAAAGTATTTGATCCATCAGATAACAATGTGCCGAGCAAAAGAAAAAGGGGTCGTCCTGTGGGGTCCTTGAACAAGAGCACAATAAAAAAAAGATTGATGGTGGCTGGACATATTAAGGATGATGCACCATTATCAGAAAGCCAATTTTCTTTGGATGGAAGTGGTGATGAAATAGACCAGGAAGATTCTTTGCCGCATGAAGAATCAGGTGGAGTTTGCTCAGTTTGCCTTGTACAAAAACCACGAGGATCAAATGATAGACTTGTTGAATGCCGTGATTGCAGCAACAAAGCTCATATAAGCTGTTTGCAATCAGGTTCCAATATTTTAAAACCAAGGCCTGACAACACATGGCAATGTCCTCATTGTAAAACATGTGTAATATGCTGTGAAACTAATGATGCTGGTGTTCTCACTGTCTGCAGTGTTTGCTCTGATGCTTATCATGCACTTTGCCATGCACCTCAGATACCAGATAGATTGAAAGCTTGGGATCAATGGGAATGCAATAATTGCCTTGAATCTCGACCAACTGTGATAGGGTCACCCGCCATAATACCCAGAAGCTTTGACTACAGTGGACAAAATTCACCAAATGTTGATCCTTTCTTGAAGCCACATGAACTAGATAGAGCACCATCCAAATTATCTATGGATACACCAATAGATCCAAGCATACCTGACATAACACATTGGAATACTGATGATGTTTTTGAGTACTTTTCAAAGCATCATCCTGAAGCTGCCCCTATTCTCAGAGATCAGGAATTTGATGGCCAAGCTTTAAGTATGGCATGTCGTGCTGACATTGTAAGGGGTCTGGGGTTACCTCTTGGACCTGCCCTGGCATTATATCGTATTGTGGTGAAACTACAAACAAGGAAGGATGATTGGACAATGTGTTGGGGCTAA

Protein

MSEIKYKNQILAAIDHLRARKSRPDANRICKFMLKCYKVQPKDTKADLKRCLKEKSIYKVDYKDNVSYRNAAKWRKKSKNNTMSAAIATSERRIITSAIATLIYQDQSYLENGIAFDDLIKAASDQESKYSKKQLENIVNKELSSGSLVKLPNGNLALGPADHDVDSSDSFRFESNADSNTKMTSSANSSCRSSPQRTRGRPKKRGGGVSGGHSNNTTRSTAVRVGERRKMAKKVFDPSDNNVPSKRKRGRPVGSLNKSTIKKRLMVAGHIKDDAPLSESQFSLDGSGDEIDQEDSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCKTCVICCETNDAGVLTVCSVCSDAYHALCHAPQIPDRLKAWDQWECNNCLESRPTVIGSPAIIPRSFDYSGQNSPNVDPFLKPHELDRAPSKLSMDTPIDPSIPDITHWNTDDVFEYFSKHHPEAAPILRDQEFDGQALSMACRADIVRGLGLPLGPALALYRIVVKLQTRKDDWTMCWG

Uniprot

H9IT35   A0A2H1VCR0   A0A2W1C1N4   A0A1E1WS12   A0A0L7KZN4   A0A3S2TT00   + More
A0A194PWS6   A0A194QXP4   A0A0T6BBT1   A0A1Y1M299   D6X0K5   A0A139WC12   A0A1W4XFY4   A0A1B6D2Z5   A0A1B6FEX3   A0A2J7QCI4   A0A067QJP2   A0A1B6M1P8   A0A2P8ZAQ7   A0A0P5XDJ5   A0A0P5KPZ8   U4UM26   A0A0P4YX62   A0A1S3JT61   A0A0P5JBU1   A0A210QTE6   A0A0P5FF94   A0A2R5LEF8   A0A0P5WLE8   A0A293MG14   E0VNK3   A0A0P5P6B3   A0A0N8E1J6   A0A0P6BPX3   A0A0P5LUS2   A0A0P5P312   A0A0N8AID9   A0A0P5XZ01   A0A0P5TL35   C3YIJ3  

Pubmed

19121390    28756777    26227816    26354079    28004739    18362917    + More
19820115    24845553    29403074    23537049    28812685    20566863    18563158   

EMBL

BABH01013295    ODYU01001851    SOQ38630.1    KZ149892    PZC79030.1    GDQN01001290    + More
JAT89764.1    JTDY01004084    KOB68625.1    RSAL01000005    RVE54364.1    KQ459586    KPI97816.1    KQ461073    KPJ09730.1    LJIG01002132    KRT84808.1    GEZM01042290    JAV79964.1    KQ971371    EFA10101.2    KYB25472.1    GEDC01017353    JAS19945.1    GECZ01021115    JAS48654.1    NEVH01016289    PNF26289.1    KK853262    KDR09211.1    GEBQ01010108    JAT29869.1    PYGN01000121    PSN53578.1    GDIP01073717    LRGB01002076    JAM29998.1    KZS09314.1    GDIQ01188153    JAK63572.1    KB632362    ERL93533.1    GDIP01222375    JAJ01027.1    GDIQ01227289    JAK24436.1    NEDP02001999    OWF52006.1    GDIQ01258468    JAJ93256.1    GGLE01003775    MBY07901.1    GDIP01097389    JAM06326.1    GFWV01019889    MAA44617.1    DS235340    EEB14959.1    GDIQ01133030    JAL18696.1    GDIQ01070900    JAN23837.1    GDIP01015126    JAM88589.1    GDIQ01167557    JAK84168.1    GDIQ01134522    JAL17204.1    GDIP01144425    JAJ78977.1    GDIP01067137    JAM36578.1    GDIP01126240    JAL77474.1    GG666515    EEN59926.1   

Proteomes

UP000005204    UP000037510    UP000283053    UP000053268    UP000053240    UP000007266    + More
UP000192223    UP000235965    UP000027135    UP000245037    UP000076858    UP000030742    UP000085678    UP000242188    UP000009046    UP000001554   

PRIDE

H9IT35   

Pfam

PF00415   RCC1        + More
PF00628   PHD
PF00536   SAM_1
PF02198   SAM_PNT

Interpro

IPR013761   SAM/pointed_sf        + More
IPR011011   Znf_FYVE_PHD       
IPR019787   Znf_PHD-finger       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR000408   Reg_chr_condens       
IPR009091   RCC1/BLIP-II       
IPR001660   SAM       
IPR036427   Bromodomain-like_sf       
IPR001841   Znf_RING       
IPR019786   Zinc_finger_PHD-type_CS       
IPR003118   Pointed_dom       
IPR005818   Histone_H1/H5_H15       
IPR038045   PHF10       

SUPFAM

SSF47769   SSF47769        + More
SSF57903   SSF57903       
SSF50985   SSF50985       

Gene 3D

1.10.150.50     3.30.40.10     2.130.10.30     1.20.920.10    

ProteinModelPortal

H9IT35   A0A2H1VCR0   A0A2W1C1N4   A0A1E1WS12   A0A0L7KZN4   A0A3S2TT00   + More
A0A194PWS6   A0A194QXP4   A0A0T6BBT1   A0A1Y1M299   D6X0K5   A0A139WC12   A0A1W4XFY4   A0A1B6D2Z5   A0A1B6FEX3   A0A2J7QCI4   A0A067QJP2   A0A1B6M1P8   A0A2P8ZAQ7   A0A0P5XDJ5   A0A0P5KPZ8   U4UM26   A0A0P4YX62   A0A1S3JT61   A0A0P5JBU1   A0A210QTE6   A0A0P5FF94   A0A2R5LEF8   A0A0P5WLE8   A0A293MG14   E0VNK3   A0A0P5P6B3   A0A0N8E1J6   A0A0P6BPX3   A0A0P5LUS2   A0A0P5P312   A0A0N8AID9   A0A0P5XZ01   A0A0P5TL35   C3YIJ3  

PDB

2KWO     E-value=1.34608e-10,     Score=161

KEGG

101739754    no KO assigned | (RefSeq) histone-lysine N-methyltransferase 2D-like

GO

GO:0046872   GO:0071564   GO:0016021   GO:0005634   GO:0043565   GO:0003677   GO:0000786   GO:0016740   GO:0006334   GO:0005515   GO:0008270   GO:0050660   GO:0016668   GO:0045454   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

PANTHER

PTHR10615:SF174  

Length:

536

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.5451

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01141

outside

1  -  536

 

 

Pi

330.484809

Theta

233.45452

Tajima's D

1.292041

CLR

0

CSRT

0.733663316834158

Interpretation

Uncertain