SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13040
Pre Gene Modal
BGIBMGA000416
Annotation
PREDICTED:_protein_FAM107B_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.137
 

Sequence

CDS
ATGGTGCAAGAAGGCGAGAGTGGTGCGGGGAGTGAAAGCCTCATCGCACCACGACGACTGCCAAATCCATGCTTAGAAAGTCCACAGCGTATGGACTTGCATAGAGAGCTGCTCTTTAATCAGAGGATAGGAAAGAATGTCCTAAATCAAAAGAGCGAATTGGAAAAGGCGCTATCGAAACACAAAGAGAAGCAGATATTGAATCAAATGCGGGAACAGCAACACAAGGATGCGCCAGAATTAGAACGCGCCCTGACAGAGCGAGCTCGGCGACTAGAACAAGCCGAGCAGACTACAGAAGAAGTAGAGCCGGGCACAAACCCGACTTTGCAAGAGATACGAGCGCGCTTGAGACATGCGGCTCCTCCCGCGCACACACCGGCAGCCTCTGCACACTGA
Protein
MVQEGESGAGSESLIAPRRLPNPCLESPQRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEKQILNQMREQQHKDAPELERALTERARRLEQAEQTTEEVEPGTNPTLQEIRARLRHAAPPAHTPAASAH

Summary

Pfam
PF06625   DUF1151
Interpro
IPR009533   FAM107       

Ontologies

GO

Topology

Length:
132
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.07601
outside
1  -  132
 
 

Population Genetic Test Statistics

Pi
225.137706
Theta
198.630304
Tajima's D
0.625587
CLR
1.560153
CSRT
0.551822408879556
Interpretation
Uncertain
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