SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13038  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000418
Annotation
yellow-c_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 0.861
 

Sequence

CDS
ATGAAACTACTGGCGTTTGCCATTGCTTTAGTAGTGGCATCATGTGAAGCTGCTACTCCACAGCTACGATTTGCTTGGAAAGAAGTAGATTACGAATGGAACACACCGGCTGAACGTGAGAATGCCATCAAAAGTGGTGACTTTGTACCAGCGAATAATTTGCCTTTGGGCTTAGGGCGATGGAAAAACAAATTGTTTGTAACGGTGCCCAAGTGGAAGAATGGTGTCGCTTCTTCGTTGAATTATGTTGATTTGAATGGTACCTCAGATCAACTTCTAAAGCCGTATCCATCGCTAAAAGACAACTTCATTCCGGATTCAGCAAAGGATTTGCCATCAAATAAAACTATTATTTCAGTGTTTAGAATTTACATTGACCCTTGTGACAGACTTTGGGTTATGGATACTGGTCTTGCTGATATTTGGGGTGCAGGAAATCAAATTGTCAGACCATCTATCGTGATATTCGATTTGAAAACTGATCAACTGCTTCATAGATACTTCTTTAAGCTAGAGGACATGAAAGAGGATTCATTCTTTGCTAATATCGTCGTCGATGTCGATCAAAACACTTGTGATGACGCGTTTGCGTATATCCCGGATCTAGGGGGCTATGGTGTGGTAGTGTACAGTTTAAAACAAAACGACTCTTGGAGAGTGGCTCATCATTTCTTCCACTTCGAACCGCTGGCTGGGTCGTATCGTGTGGGCGGCGTGGAATTCCACTGGACTGATGGAGTATTTGCATTAGCGCTATCTGAACCTCGAGAGAACGGATTCCGAACAATGTTCTTCCATGCATTCTCAAGCACCAAAGAGTTTTGCGTTTCTACGGAGCTTCTACGCAATTACACACATATTGACAAACAAGAAGCGTTCCACGATTTCAAGCTTCTTGGAGACAGAGGACAAGGAACGCAGGCCTCGGCCAGTTTTTATGATCCCAATACTCAAGTGTTGTTCTATGGCCAGGTAAACCGGGATGGGGTGGGATGCTGGAATTCTAATAAACCTTACACTCCTGAGAACAACGTACTGATATTCAGTGATCCCAAACTTTACGAATTTCCAAACGACTTAAAGATTGATGACGAAGGCTTAATGTGGATCCTGGTCGACAAACTCCCACGGTTCCTGTACAAGACCCTCGATCCCAATGAAGTGAACTATAGCATTTACAGTATTAGTGCAAAAGATGCAATTGCAGGAACAGCATGCGAATAA
Protein
MKLLAFAIALVVASCEAATPQLRFAWKEVDYEWNTPAERENAIKSGDFVPANNLPLGLGRWKNKLFVTVPKWKNGVASSLNYVDLNGTSDQLLKPYPSLKDNFIPDSAKDLPSNKTIISVFRIYIDPCDRLWVMDTGLADIWGAGNQIVRPSIVIFDLKTDQLLHRYFFKLEDMKEDSFFANIVVDVDQNTCDDAFAYIPDLGGYGVVVYSLKQNDSWRVAHHFFHFEPLAGSYRVGGVEFHWTDGVFALALSEPRENGFRTMFFHAFSSTKEFCVSTELLRNYTHIDKQEAFHDFKLLGDRGQGTQASASFYDPNTQVLFYGQVNRDGVGCWNSNKPYTPENNVLIFSDPKLYEFPNDLKIDDEGLMWILVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTACE

Summary

EMBL
JN977505    AFC87785.1    DQ358081    ABC96696.1    KQ461073    KPJ09736.1    + More
KQ459586    KPI97813.1    GU063827    ADX87347.1    GU063828    ADX87348.1    GU063829    ADX87349.1    AK401619    BAM18241.1    GAIX01004647    JAA87913.1    GU128935    ADD60432.1    GU128920    ADD60430.1    GU128927    ADD60431.1    GU128911    ADD60429.1    KZ149892    PZC79024.1    AGBW02007691    OWR54736.1    NWSH01005352    PCG64280.1    MG846918    AXY94770.1    GU128944    ADD60433.1    JTDY01000431    KOB77206.1    GAPW01001581    JAC12017.1    CH477436    EAT40936.1    GFDL01001034    JAV34011.1    KQ971372    EFA10662.1    GEZM01061260    JAV70598.1    CH963913    EDW77474.1    GALX01005526    JAB62940.1    GGMR01006877    MBY19496.1    PYGN01000035    PSN56703.1    GU111763    ACY71056.1    ATLV01020673    KE525304    KFB45517.1    AE014134    AY113601    AAF53432.3    AAM29606.1    AHN54461.1    ADMH02001341    ETN62954.1    CM000361    EDX05093.1    CH480818    EDW51796.1    CH379058    EAL34424.2    CH479184    EDW37044.1    CH954177    EDV57991.2    GFXV01007483    MBW19288.1    AXCM01000163    CM000157    EDW89785.1    AAAB01008980    LJIG01022667    KRT79351.1    JRES01001187    KNC24696.1    CH902620    EDV30715.1    GAMC01015957    GAMC01015955    JAB90600.1    GDHF01013300    JAI39014.1    KY221856    ATB56354.1    OUUW01000046    SPP90011.1    AXCN02001871    APCN01005282    CH940649    EDW63659.1    CH916368    EDW02839.1    CM002910    KMY90320.1    KMY90319.1    CP012523    ALC39708.1    CH933807    EDW11782.1    CCAG010008538    KK852507    KDR22429.1    GBXI01016506    GBXI01002968    JAC97785.1    JAD11324.1    KA647726    AFP62355.1    BT128638    AEE63595.1    EAA13941.4    APGK01058835    APGK01058836    KB741292    ENN70318.1    DS235331    EEB14752.1    UFQT01001971    SSX32254.1    KB632334    ERL92756.1    UFQT01004668    SSX35750.1    GBHO01039748    JAG03856.1    GBBI01001348    JAC17364.1    EZ423471    ADD19747.1    GBRD01006816    GDHC01016647    JAG59005.1    JAQ01982.1    CVRI01000004    CRK87272.1    KK855565    PTY23137.1    GGMS01002212    MBY71415.1    GDKW01000657    JAI55938.1    ACPB03019756    GAHY01001044    JAA76466.1    GDHC01021015    JAP97613.1    GEDC01000535    JAS36763.1    NEVH01020862    PNF20872.1    GBHO01039747    JAG03857.1   
Pfam
PF03022   MRJP
Interpro
IPR017996   Royal_jelly/protein_yellow        + More
IPR011042   6-blade_b-propeller_TolB-like       
Gene 3D
PDB
3Q6T     E-value=3.63725e-33,     Score=354

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.999044
 
 
Length:
407
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0609500000000001
Exp number, first 60 AAs:
0.05844
Total prob of N-in:
0.00400
outside
1  -  407
 
 

Population Genetic Test Statistics

Pi
246.890822
Theta
176.375384
Tajima's D
1.114951
CLR
0.000922
CSRT
0.692815359232038
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 IYIDPCDR 96.00 1e-11
26280517 DGIAITISNDVQGDDGRPAYGDGKDK 96.00 1e-11
28467696 DGVFSTIADPSGR 96.00 1e-11
29197581 DAIAGTACE 96.00 1e-11
29197581 EVDYEWNTPAER 100.00 8e-06
26822097 DGVGCWNSNKPYTPENNVIIFSDPK 100.00 0.019
26280517 EPIVAAAPAVVAEPAVVPAR 100.00 0.019
24402669 EVDWEFNPINVK 100.00 0.019
28467696 EVDWEFNPINVK 100.00 0.019
29197581 EFCVSTEIIR 100.00 0.019
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号