Gene

KWMTBOMO13037  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000419

Annotation

Lambda-crystallin-like_[Papilio_xuthus]

Location

Bomo_Chr22(-):6952906-6960661      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.718

CDS

ATGGCATCTAAATTCAAGTCGGAAAAGATCGGGATCGTTGGAAGTGGTTTAATCGGGAGATCATGGGCGATGTTGTTTGCCTCAGTTGGTTATCAGGTTACTGTATATGATGTAGTCGCAAAACAGATTACCGATGCCATTGAGGACATCAAATACCAATTGCATACCCTTGAAAACGATGGTCTGTTACGAGGCGAGCTCAAAGCTAGCGAACAATTTCAATGTATAAAAGGGTCTACGGATCTGGAAACCGCAGTTAAAGGAGCTATATTTGTTCAGGAATGTGTTCCAGAGAATCTTGACCTTAAAAAAAAGGTGTTCCAGAATCTCGACAGCGTAGTTGACGATAACACGATATTATCAAGTTCAACAAGTACTACTTTGCCATCATTATTCTCTGAAGGATTGAAACATAAGTCTCAGGTCATTGTTTCTCATCCGGTGAATCCACCTTATTACGTACCCCTTGTTGAAATTGTCCCAGCACCCTGGACTAAGCCTGAAGTTGCTAAGAAAACCAGGGAAATTATGGAAGAGATCGGACAGCAGCCAGTTTCTTTGACCAGGGAAATAGACGGATTTGTTTTGAATCGAATTCAATACGCAATCCTTGATGAAGTTTGGCGTCTCGTTGACGACAAAGTTGTTGATGTAGCGGATATTGATAAAGTTATGTCGGAAGGACTTGGAATGAGATATGCATTTTTGGGTGCTCTAGAAACAGCCCATTTGAATGCTGAAGGCATGCAAAGTTATATTGATAGATACGGAGAGACAATTTATCGTGTCAGCAATGAAATGGGACCGGCTCCGCGTATGACGACAAATAAAAGCAGAAACTCGGTGTGCGAACAATTGGAGAAGTTAGTACCGATTGAAAAACTTCAAGATCGTCGTAATTGGCGCGATCTTTGTTTAATGCGTCTGTCACTCCTCAAGAAAGAAATGAACAAGAAATACCAGAGTTCGTGA

Protein

MASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLETAVKGAIFVQECVPENLDLKKKVFQNLDSVVDDNTILSSSTSTTLPSLFSEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAILDEVWRLVDDKVVDVADIDKVMSEGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRVSNEMGPAPRMTTNKSRNSVCEQLEKLVPIEKLQDRRNWRDLCLMRLSLLKKEMNKKYQSS

Uniprot

H9IT40   S4NJ17   A0A194PWW4   A0A2H1VHV1   A0A194QW81   A0A3G1T1B1   + More
A0A2W1C4D9   U5EV34   A0A336KBN1   A0A1B0CSP8   A0A1L8DYK4   A0A1L8DYH6   T1PBQ3   A0A1I8Q5L3   W8BTU6   A0A2M4CZ11   A0A182NI22   A0A182KR42   A0A084VD64   A0A182VL32   F5HIY0   A0A2M4CZ36   B4NCM5   A0A2M4ACP9   A0A182MJD2   A0A0K8W7I9   A0A1B6CJY9   B3N0T5   A0A067QZT8   A0A2M3Z785   A0A1W4WDY8   K7IVY6   A0A2M3Z7B4   A0A232EQR2   A0A182TGV4   A0A2M4BUU1   Q9VXI1   A0A2M4BUV5   B4MG70   A0A0L0BUQ1   B3NX62   A0A026WB83   A0A182XYP7   B4IV47   B4L867   B4IF52   A0A0M4EQH7   B4HB74   B5DNL7   A0A2J7Q2X7   B4JJD4   A0A1B0AJ10   A0A182K2A6   A0A3B0KJF1   A0A1A9UV23   A0A034WRW4   A0A182WJE0   A0A0C9RDD0   A0A1Y1K378   A0A182FDE5   A0A1B0AT08   A0A1A9YGV3   D2A5H7   A0A0N8CF05   A0A0P4Z272   A0A182R7B4   A0A1S4FI67   A0A0P4ZC84   A0A0P4XWD2   Q0IEU5   E9GXZ8   A0A182QWU0   A0A0P5H1H2   A0A182X3X4   F4WF20   E2AYS3   A0A0J7K5X1   A0A195CHB6   J3JXC3   A0A0P4YAE2   A0A1Q3FNS8   N6TYD9   A0A0P5RYA8   B0XIL0   A0A1J1I7P6   A0A182J479   W5JKB0   A0A0P6AGJ4   A0A0P4YS64   A0A0K8TTV4   V9IJE3   D3TM79   E5L9L6   E2BIS6   A0A158NP86   A0A151WXV4   A0A195F9B4   A0A182I345   A0A182SGT9   A0A2P8Y7K9  

Pubmed

19121390    23622113    26354079    28756777    25315136    24495485    + More
20966253    24438588    12364791    14747013    17210077    17994087    24845553    20075255    28648823    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    24508170    30249741    25244985    17550304    15632085    25348373    28004739    18362917    19820115    17510324    21292972    21719571    20798317    22516182    23537049    20920257    23761445    26369729    20353571    20978910    21347285    29403074   

EMBL

BABH01013306    GAIX01013859    JAA78701.1    KQ459586    KPI97812.1    ODYU01002641    + More
SOQ40410.1    KQ461073    KPJ09737.1    MG846925    AXY94777.1    KZ149892    PZC79023.1    GANO01002048    JAB57823.1    UFQS01000180    UFQT01000180    SSX00835.1    SSX21215.1    AJWK01026371    GFDF01002570    JAV11514.1    GFDF01002571    JAV11513.1    KA646196    AFP60825.1    GAMC01006172    JAC00384.1    GGFL01006388    MBW70566.1    ATLV01011185    KE524650    KFB35908.1    AAAB01008807    EGK96241.1    GGFL01006389    MBW70567.1    CH964239    EDW82584.1    GGFK01005057    MBW38378.1    AXCM01000608    GDHF01005300    JAI47014.1    GEDC01023625    GEDC01008563    GEDC01004362    GEDC01000373    JAS13673.1    JAS28735.1    JAS32936.1    JAS36925.1    CH902644    EDV34814.1    KK853056    KDR11934.1    GGFM01003631    MBW24382.1    GGFM01003629    MBW24380.1    NNAY01002746    OXU20636.1    GGFJ01007642    MBW56783.1    AE014298    BT009948    AAF48586.2    AAQ22417.1    GGFJ01007641    MBW56782.1    CH940672    EDW57393.1    JRES01001303    KNC23767.1    CH954180    EDV46891.1    KK107347    QOIP01000007    EZA52294.1    RLU20135.1    CH892609    EDX00724.1    CH933814    EDW05642.2    CH480832    EDW46106.1    CP012528    ALC48190.1    CH479248    EDW37886.1    CH379064    EDY73023.1    NEVH01019075    PNF22927.1    CH916370    EDV99686.1    OUUW01000011    SPP86599.1    GAKP01002022    GAKP01002021    JAC56930.1    GBYB01011137    JAG80904.1    GEZM01094116    JAV55919.1    JXJN01003090    KQ971345    EFA05073.1    GDIP01138207    JAL65507.1    GDIP01221751    GDIP01085560    JAJ01651.1    GDIP01216436    JAJ06966.1    GDIP01239848    JAI83553.1    CH477478    EAT40256.1    GL732574    EFX75510.1    AXCN02000387    GDIQ01256172    JAJ95552.1    GL888115    EGI67071.1    GL443983    EFN61436.1    LBMM01013560    KMQ85576.1    KQ977791    KYM99826.1    BT127892    AEE62854.1    GDIP01230447    JAI92954.1    GFDL01005861    JAV29184.1    APGK01047289    KB741077    KB632432    ENN74340.1    ERL95524.1    GDIQ01112446    JAL39280.1    DS233328    EDS29434.1    CVRI01000043    CRK96211.1    ADMH02001280    ETN63214.1    GDIP01031046    JAM72669.1    GDIP01223294    JAJ00108.1    GDAI01000223    JAI17380.1    JR048828    AEY60777.1    EZ422531    ADD18807.1    HQ383997    ADQ64490.1    GL448530    EFN84416.1    ADTU01022275    KQ982668    KYQ52521.1    KQ981727    KYN36802.1    APCN01000197    PYGN01000839    PSN40144.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000092461    UP000095301    UP000095300    + More
UP000075884    UP000075882    UP000030765    UP000075903    UP000007062    UP000007798    UP000075883    UP000007801    UP000027135    UP000192221    UP000002358    UP000215335    UP000075902    UP000000803    UP000008792    UP000037069    UP000008711    UP000053097    UP000279307    UP000076408    UP000002282    UP000009192    UP000001292    UP000092553    UP000008744    UP000001819    UP000235965    UP000001070    UP000092445    UP000075881    UP000268350    UP000078200    UP000075920    UP000069272    UP000092460    UP000092443    UP000007266    UP000075900    UP000008820    UP000000305    UP000075886    UP000007755    UP000000311    UP000036403    UP000078542    UP000019118    UP000030742    UP000002320    UP000183832    UP000075880    UP000000673    UP000008237    UP000005205    UP000075809    UP000078541    UP000075840    UP000075901    UP000245037   

PRIDE

H9IT40    Q9VXI1   

Pfam

PF02737   3HCDH_N        + More
PF00725   3HCDH
PF13302   Acetyltransf_3
PF00833   Ribosomal_S17e
PF02463   SMC_N

Interpro

IPR006108   3HC_DH_C        + More
IPR008927   6-PGluconate_DH-like_C_sf       
IPR036291   NAD(P)-bd_dom_sf       
IPR006176   3-OHacyl-CoA_DH_NAD-bd       
IPR022694   3-OHacyl-CoA_DH       
IPR013328   6PGD_dom2       
IPR006180   3-OHacyl-CoA_DH_CS       
IPR016181   Acyl_CoA_acyltransferase       
IPR000182   GNAT_dom       
IPR036401   RPS17e-like_sf       
IPR027417   P-loop_NTPase       
IPR027131   SMC5       
IPR018273   Ribosomal_S17e_CS       
IPR001210   Ribosomal_S17e       
IPR003395   RecF/RecN/SMC_N       

SUPFAM

SSF48179   SSF48179        + More
SSF51735   SSF51735       
SSF55729   SSF55729       
SSF52540   SSF52540       
SSF116820   SSF116820       

Gene 3D

1.10.1040.10     1.10.60.20    

ProteinModelPortal

H9IT40   S4NJ17   A0A194PWW4   A0A2H1VHV1   A0A194QW81   A0A3G1T1B1   + More
A0A2W1C4D9   U5EV34   A0A336KBN1   A0A1B0CSP8   A0A1L8DYK4   A0A1L8DYH6   T1PBQ3   A0A1I8Q5L3   W8BTU6   A0A2M4CZ11   A0A182NI22   A0A182KR42   A0A084VD64   A0A182VL32   F5HIY0   A0A2M4CZ36   B4NCM5   A0A2M4ACP9   A0A182MJD2   A0A0K8W7I9   A0A1B6CJY9   B3N0T5   A0A067QZT8   A0A2M3Z785   A0A1W4WDY8   K7IVY6   A0A2M3Z7B4   A0A232EQR2   A0A182TGV4   A0A2M4BUU1   Q9VXI1   A0A2M4BUV5   B4MG70   A0A0L0BUQ1   B3NX62   A0A026WB83   A0A182XYP7   B4IV47   B4L867   B4IF52   A0A0M4EQH7   B4HB74   B5DNL7   A0A2J7Q2X7   B4JJD4   A0A1B0AJ10   A0A182K2A6   A0A3B0KJF1   A0A1A9UV23   A0A034WRW4   A0A182WJE0   A0A0C9RDD0   A0A1Y1K378   A0A182FDE5   A0A1B0AT08   A0A1A9YGV3   D2A5H7   A0A0N8CF05   A0A0P4Z272   A0A182R7B4   A0A1S4FI67   A0A0P4ZC84   A0A0P4XWD2   Q0IEU5   E9GXZ8   A0A182QWU0   A0A0P5H1H2   A0A182X3X4   F4WF20   E2AYS3   A0A0J7K5X1   A0A195CHB6   J3JXC3   A0A0P4YAE2   A0A1Q3FNS8   N6TYD9   A0A0P5RYA8   B0XIL0   A0A1J1I7P6   A0A182J479   W5JKB0   A0A0P6AGJ4   A0A0P4YS64   A0A0K8TTV4   V9IJE3   D3TM79   E5L9L6   E2BIS6   A0A158NP86   A0A151WXV4   A0A195F9B4   A0A182I345   A0A182SGT9   A0A2P8Y7K9  

PDB

3ADP     E-value=5.58563e-85,     Score=800

KEGG

101740023    K13247 L-gulonate 3-dehydrogenase [EC:1.1.1.45] | (RefSeq) lambda-crystallin

PATHWAY

00040    Pentose and glucuronate interconversions - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0070403   GO:0006631   GO:0003857   GO:0016021   GO:0050104   GO:0007062   GO:0006412   GO:0003735   GO:0000724   GO:0030915   GO:0005840   GO:0016491   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0015930   GO:0055114  

PANTHER

PTHR45916  

Length:

323

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.99395

Exp number, first 60 AAs:

3.98897

Total prob of N-in:

0.19576

outside

1  -  323

 

 

Pi

256.572105

Theta

192.380112

Tajima's D

1.090221

CLR

0.041653

CSRT

0.688315584220789

Interpretation

Uncertain