Gene

KWMTBOMO13029  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000288

Annotation

PREDICTED:_traB_domain-containing_protein-like_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr22(+):6662650-6671909      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.164

CDS

ATGGATGCTGCCGATCGTCTCCTACAAAACGACGAACATAAGCCCCGTGATAACTCAGATGGAATAATATTCGCACCGCCTAAACCTTCAGTTAAACGTGATATTACGAATGAATGTCAGTTGTTTATAAAAGCTGAGGATGGTGGAGGAGATGCATCAATAAAAATCAATGAAAATATGCCCGGGGAGAACAGTGGAAAACCAAAGTTTGTAACATCAACTCCTGATGAAAAAAAGGAAAGCCCTTCTGAAAATCAAATTGCTGATTCTAATCCAGAATGTGATATGGAAGGTGTTCCAGAACTACCTTTAGATGAAGGATTGCCTAGCACTGTCACAGTACTAGATGCGCCTGATGGCGGAAAGGTATATTTAATCGGTACTGCACATTTCAGTCTACAATCACAAGAAGATGTATCTCGGGTAATACAAGAAGTAAAGCCCCACATTGTTACAGTTGAGTTATGCGTTCAGAGAACCAATATTTTATTGCTCGATGAAGAAGTCATTCTTAGAGAAGCTAAAAATATTAATATCAAGAAAATAAGGGCAACAATGGCTCAAAATGGTGTCTTCAATGGACTCATGTACATTCTTCTCTTAAATATGTCTGCTCATATCACCAGAGAGTTAGGTATGGCACCTGGTGGGGAATTCCGACGTGCTATGGCAGAGGCGAAAAAGATTCCGAACTGTGTTGTACAACTCGGTGACAGAGCGATAGACGTTACATTGCATAGAGCTATCGCGTCACTCTCCTGGGGACAGACTATAAGATTCATATGGCATTTACTTACGTCTAATCAAACTATAAGCTTAGAAGAAGTGGAAAAATGTAAACAGAAGAAAATGTTGGATGATATGTTGGAGGAAATGGCTGAAGAATTTCCCGCATTAAAGCAAGTGTTTGTAGTTGAAAGAGATATGTTCCTGTGTCATTCCCTGCAAGTAGCTGCTTTGCAGCCGCGTCACGAGCCTTGTCGCATCGTGGGAGTCGTTGGGATCGGCCACGTCGGCGGCATCGTGGAGCACTGGGGCAAGATCAAGCCAGAAGACATTCCGCCTTTGTTACTAGTACCGCCACCGTCGTTGTCGACCCGCGTGCTGCGCTCGAGCGTGCGCGTGGCGTGCGTGTGCGGCGTGCTGTACGCCGCCTACCGGCTGTTCCCACGCCGCCTGCTGCCCTGA

Protein

MDAADRLLQNDEHKPRDNSDGIIFAPPKPSVKRDITNECQLFIKAEDGGGDASIKINENMPGENSGKPKFVTSTPDEKKESPSENQIADSNPECDMEGVPELPLDEGLPSTVTVLDAPDGGKVYLIGTAHFSLQSQEDVSRVIQEVKPHIVTVELCVQRTNILLLDEEVILREAKNINIKKIRATMAQNGVFNGLMYILLLNMSAHITRELGMAPGGEFRRAMAEAKKIPNCVVQLGDRAIDVTLHRAIASLSWGQTIRFIWHLLTSNQTISLEEVEKCKQKKMLDDMLEEMAEEFPALKQVFVVERDMFLCHSLQVAALQPRHEPCRIVGVVGIGHVGGIVEHWGKIKPEDIPPLLLVPPPSLSTRVLRSSVRVACVCGVLYAAYRLFPRRLLP

Catalytic Activity

L-lysyl-[histone] + S-adenosyl-L-methionine = H(+) + N(6)-methyl-L-lysyl-[histone] + S-adenosyl-L-homocysteine

Uniprot

H9ISR1   A0A2W1BZY5   A0A3S2N4J9   A0A1E1WDI0   A0A1E1WKC5   A0A212EXF0   + More
A0A194PXQ1   A0A2H1V4L1   S4PF48   K7J4X6   A0A0J7NXS8   A0A232FD08   E2AJS2   A0A1B6FGN2   A0A1B6F9F5   A0A158NN43   F4X1W1   A0A195BB71   A0A087T972   E2B9A7   A0A2R5LMV9   A0A195FB17   A0A154PHU0   B4M3U8   A0A0C9S301   A0A2M4AAT9   A0A1E1X567   L7MI15   A0A1B0CDW2   A0A1L8DLI0   A0A2M4A903   A0A2M4A702   A0A2M4A742   A0A2M4AAC9   A0A1L8DL64   A0A0L0C7H2   A0A0K8TRI6  

Pubmed

19121390    28756777    22118469    26354079    23622113    20075255    + More
28648823    20798317    21347285    21719571    17994087    18057021    26131772    28503490    25576852    26108605    26369729   

EMBL

BABH01013325    BABH01013326    KZ149892    PZC79015.1    RSAL01000680    RVE41243.1    + More
GDQN01006057    JAT84997.1    GDQN01003585    JAT87469.1    AGBW02011787    OWR46141.1    KQ459586    KPI97803.1    ODYU01000613    SOQ35706.1    GAIX01006760    JAA85800.1    LBMM01000917    KMQ97220.1    NNAY01000415    OXU28565.1    GL440068    EFN66316.1    GECZ01020636    JAS49133.1    GECZ01022969    JAS46800.1    ADTU01021015    GL888553    EGI59570.1    KQ976537    KYM81439.1    KK114070    KFM61661.1    GL446479    EFN87713.1    GGLE01006726    MBY10852.1    KQ981693    KYN37576.1    KQ434912    KZC11409.1    CH940652    EDW59309.1    KRF78783.1    KRF78784.1    KRF78785.1    GBZX01001306    JAG91434.1    GGFK01004558    MBW37879.1    GFAC01004795    JAT94393.1    GACK01002116    JAA62918.1    AJWK01008302    GFDF01006870    JAV07214.1    GGFK01003777    MBW37098.1    GGFK01003256    MBW36577.1    GGFK01003283    MBW36604.1    GGFK01004432    MBW37753.1    GFDF01006871    JAV07213.1    JRES01000809    KNC28225.1    GDAI01000626    JAI16977.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000002358    UP000036403    + More
UP000215335    UP000000311    UP000005205    UP000007755    UP000078540    UP000054359    UP000008237    UP000078541    UP000076502    UP000008792    UP000092461    UP000037069   

PRIDE

H9ISR1   

Pfam

PF01963   TraB        + More
PF00856   SET
PF05033   Pre-SET

Interpro

IPR002816   TraB_fam        + More
IPR003616   Post-SET_dom       
IPR007728   Pre-SET_dom       
IPR001214   SET_dom       

ProteinModelPortal

H9ISR1   A0A2W1BZY5   A0A3S2N4J9   A0A1E1WDI0   A0A1E1WKC5   A0A212EXF0   + More
A0A194PXQ1   A0A2H1V4L1   S4PF48   K7J4X6   A0A0J7NXS8   A0A232FD08   E2AJS2   A0A1B6FGN2   A0A1B6F9F5   A0A158NN43   F4X1W1   A0A195BB71   A0A087T972   E2B9A7   A0A2R5LMV9   A0A195FB17   A0A154PHU0   B4M3U8   A0A0C9S301   A0A2M4AAT9   A0A1E1X567   L7MI15   A0A1B0CDW2   A0A1L8DLI0   A0A2M4A903   A0A2M4A702   A0A2M4A742   A0A2M4AAC9   A0A1L8DL64   A0A0L0C7H2   A0A0K8TRI6  

KEGG

101741455    no KO assigned | (RefSeq) traB domain-containing protein-like

GO

GO:0008270   GO:0005634   GO:0005694   GO:0018024  

Subcellular location

Chromosome  
Nucleus  

Length:

395

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

10.07096

Exp number, first 60 AAs:

0

Total prob of N-in:

0.45517

outside

1  -  395

 

 

Pi

210.849639

Theta

176.297678

Tajima's D

0.762419

CLR

0.020999

CSRT

0.593620318984051

Interpretation

Uncertain