SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13027  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000425
Annotation
PREDICTED:_1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma-like_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 3.787
 

Sequence

CDS
ATGATAAATCTGAAGATGTTAAAGCAATCGACGATCGTGCATCTGTGTTTCGCTATTTCGTATTTCACATCTGGATTGCTGTTGAACTTTGTACAGGCGATTTTATACTTTGGACTTAAACCGTTCAACAAAAAATTGTATAGGCAAATAAATTATTATCTTTCATATTCATTTTACAGTCAATTAGTATTCATGGCAGAATGGTGGGCTGGGTCAACCATGTCGTTATATGTAAAAAAAGATGAATACGAAAAGTTTTATGGAAAAGAACATGGATATTTAATTATGAACCACAGTTATGAAATAGATTGGTTGATGGGATGGCAATTCTGTGATGGAATCGGCGTTCTAGGCAACTGTAAAGCTTATGCTAAGAAATCAATTCAGTATCTACCCCCGATTGGCTGGATGTGGAAATTTTCAGAATTCGTATTTCTAGAAAGATCTTTTGAAAAAGATAAGGAAATTATCAAGAAGCAAATATCTGAACTTTGCGACTATCCGGATCCTGTTTGGCTATTACTGACACCCGAAGGTACAAGATATACGAAAACGAAACACGAAGCGTCTGTTAATTTCGCGAAGGAGAAAAATTTGCCGATTCTCAAGCACCACCTAACACCGCGCACTAGAGGCTTCACGACCAGCCTTCAGTTCTTCAGAGGGAAGATACCGGCTATTTATAATATTCAATTGGCTTTCGAAAAAGAGAGTAAGACTCCGCCAACACTGACAAGTTTATTATACGGGAAGCCAGTACACGCACACATGTACATTGAGCGGATACCGGTTGAGAATATACCGGAGGATGAAGCCGAAGCAACCAAGTGGATGCACGATCTTTTCGTCACAAAGGATAAAATGCAAGACTCATTCTTGAATACTGGAGATTTCTTCTTACAATCTGGTGTGGAGAGAGTTGAGGCTTTCACGTCGCGTCCGCGGATATACTCACTGTTGAACACTCTTGGCTGGGTGGTGATCACACTAACTCCGATGCTGTACTATTTACTCGGTCTTCTGTTAAGCGGAAAGCTTTTGTATTTCTCAATTGGTTGCATCATATTTGCCGCATTTTTCGTTCTCTTACAAAAATCTATTGGAATGTCAAAGATAAGCCAAGGATCTTCATACGGAACTGAAAAGAAATAA
Protein
MINLKMLKQSTIVHLCFAISYFTSGLLLNFVQAILYFGLKPFNKKLYRQINYYLSYSFYSQLVFMAEWWAGSTMSLYVKKDEYEKFYGKEHGYLIMNHSYEIDWLMGWQFCDGIGVLGNCKAYAKKSIQYLPPIGWMWKFSEFVFLERSFEKDKEIIKKQISELCDYPDPVWLLLTPEGTRYTKTKHEASVNFAKEKNLPILKHHLTPRTRGFTTSLQFFRGKIPAIYNIQLAFEKESKTPPTLTSLLYGKPVHAHMYIERIPVENIPEDEAEATKWMHDLFVTKDKMQDSFLNTGDFFLQSGVERVEAFTSRPRIYSLLNTLGWVVITLTPMLYYLLGLLLSGKLLYFSIGCIIFAAFFVLLQKSIGMSKISQGSSYGTEKK

Summary

EMBL
RSAL01000316    RVE42609.1    KJ579222    AIN34698.1    KU755507    ARD71217.1    + More
MF687648    ATJ44574.1    JX846981    AGG54998.1    JX846997    AGG55014.1    KT261709    ALJ30249.1    AGBW02011787    OWR46138.1    ODYU01013074    SOQ59752.1    GAIX01005657    JAA86903.1    KQ459586    KPI97800.1    BABH01013328    BABH01013329    BABH01013330    GEYN01000167    JAV01962.1    NWSH01005435    PCG64214.1    MF706172    ATJ44599.1    AAZX01005919    NNAY01001398    OXU24116.1    KQ434905    KZC11257.1    KK107238    EZA54711.1    GBYB01012047    GBYB01012049    JAG81814.1    JAG81816.1    GL449769    EFN82046.1    ATLV01018613    KE525239    KFB43263.1    QOIP01000007    RLU20206.1    GALX01005519    JAB62947.1    GGFJ01005782    MBW54923.1    AXCN02000428    GDKW01001692    JAI54903.1    GGFJ01005873    MBW55014.1    GANO01001241    JAB58630.1    AAAB01008807    EAA04069.4    GGFJ01005777    MBW54918.1    APCN01000162    GGFK01005106    MBW38427.1    GAMD01000547    JAB01044.1    GGFK01004917    MBW38238.1    APGK01018863    KB740085    KB632303    ENN81517.1    ERL91784.1    GGFM01002466    MBW23217.1    GGFM01002318    MBW23069.1    JXUM01053741    JXUM01053742    KQ561789    KXJ77532.1    GFDL01008253    JAV26792.1    ADMH02000046    ETN67995.1    JXUM01010680    JXUM01010681    JXUM01010682    JXUM01010683    GEZM01012252    GEZM01012251    GEZM01012250    JAV93044.1    KQ971341    EFA04525.1    CH478170    EAT33698.1    GAPW01001932    JAC11666.1    ADTU01003531    ADTU01003532    ADTU01003533    GFDF01002693    JAV11391.1    GFDF01002680    JAV11404.1    NEVH01006591    PNF37470.1    GBYB01012048    JAG81815.1    GL441643    EFN64501.1    KK853069    KDR11829.1    GAKP01018260    GAKP01018259    GAKP01018258    JAC40692.1    GBHO01039568    GBHO01039562    JAG04036.1    JAG04042.1    GDHC01015357    GDHC01008695    GDHC01005835    GDHC01000994    JAQ03272.1    JAQ09934.1    JAQ12794.1    JAQ17635.1    GEDC01006866    JAS30432.1    GDHF01011013    JAI41301.1    DS232000    EDS31134.1    KQ983089    KYQ47688.1    GEBQ01014139    JAT25838.1    CH902618    EDV39824.1    KPU78231.1    KPU78232.1    KPU78233.1    KPU78234.1    GBXI01007947    GBXI01001715    JAD06345.1    JAD12577.1    GEBQ01030020    JAT09957.1    CH479203    EDW30383.1    JRES01000240    KNC33033.1    OUUW01000012    SPP87080.1    GECZ01024821    JAS44948.1    CCAG010015849    EZ422236    ADD18512.1    CH379070    KRT08631.1    KRT08633.1    KRT08632.1    GAMC01010546    JAB96009.1    GAHY01000328    JAA77182.1    GAMC01010857    GAMC01010856    GAMC01010855    JAB95699.1    GAKP01011713    JAC47239.1    JXJN01002265    JXJN01002266    GAKP01011712    JAC47240.1    CH480815    EDW41752.1    CH963876    EDW76906.1    KRF98542.1    GFDG01002598    JAV16201.1    AE014296    BT001546    AAF49471.1    AAN71301.1    CM000363    CM002912    EDX10720.1    KMZ00038.1   
Pfam
PF16076   Acyltransf_C        + More
PF01553   Acyltransferase
Interpro
IPR002123   Plipid/glycerol_acylTrfase        + More
IPR032098   Acyltransf_C       

Ontologies

Topology

Length:
383
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
86.2604
Exp number, first 60 AAs:
32.33263
Total prob of N-in:
0.94756
POSSIBLE N-term signal
sequence
inside
1  -  11
TMhelix
12  -  34
outside
35  -  48
TMhelix
49  -  71
inside
72  -  318
TMhelix
319  -  341
outside
342  -  345
TMhelix
346  -  363
inside
364  -  383
 
 

Population Genetic Test Statistics

Pi
264.695278
Theta
205.468386
Tajima's D
1.507079
CLR
0.451147
CSRT
0.790510474476276
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 RDITNECQIFIK 100.00 2e-04
26280517 IPTGDAIPTPETVPIRK 100.00 2e-04
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