Gene

KWMTBOMO13021  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000285

Annotation

cuticular_protein_RR-2_motif_79_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):6591540-6606049      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.694 Nuclear   Reliability : 2.024

CDS

ATGGTATTGATACTTGCAAATGCACTTGCGTACCACGATCCAGATCTGAATTACCATCTTAGTCAAGTGCAAAAAGTTTCCAATTGTGCTGATTCGGGTTACTCATACCCTGCGCCTGGTATCCAACTTACTCATTCTGGAATCAACGTGGCTCCGGCTCCAGCTGTAGTTTCACAGCCAACCGCCTCTATCAAGTACACTCCGGCCATTCAGTATGCCGCACAACCAACTTACCAAACGGTTGAATCAAACTACATTACTGCACCGGTGTATACAAAAGAACTGCATGGTTACGCAACATCCGCTGGCCTGTCTTCAAGTGCGTCAACTACTAAAACAGTGACACCCCTAGCAACATACGCTCAAGCACCCATAATTGCAAAGATTACCGCAGCACCCCTCATTGCTAAGTTCTCTGTGGCGCCAGCTAGAACCACTTACTATTCACAAAACAACGTACAACAGGCATCATACGCATCTGGATCTTCAGCGAAGGCATCTCTATACAGCAACACTGTTCATCAAGGACCTGTAGTATCGCAAGTGTTTGCTGCACCGACAGTTAGATACGCTGCATCACCAGCGCTAAAAGCACAGCAAAACGCACAAGTTGATTCTACGCAATACTCTACTGGTGTTCAATATAACCAAGTCCAAAACTTACCCGCCCTACAGATTCCACCAGGAATTCAATATGCCGCGCCAAGTGTTTCTCAAGTGCCTGTCCCTAGAATTACACAATATTTTACGCCTACGCAATATTCCTCGGGAGCAAGCTACATCGCTTCGACTGCAGCACAGTACCTACCAACGGTAAAGCACGCTGGAGCAGCTCTGAATCAAGTTGTAGTGCCAATTTCTAATGGCTATTCAAAAGGACTTAGCTCAGCGCCAGCCTACTCGTCTGCTTCTTTCACTCGGCACTCGAGTCCCGCGGTAGCGGCATACTCAAGACCAGCCATTGCTCCGGTCTCGACTCACTACTCTACTCCAGTCATATCTCACTACTCTACTCCGGGTGTTGCGCAAGTTCCAGAATATCTTGGAGCAAGATCAAACTATGCATCTACTCCATCGTTAACAATCGGAGGTCATATTTCATCAGCTAATTCTGTGAAAAACGTTCACACAGAATTCTTAGAAAACTATGACGCACATCCGAGATACGCCTTTGAATACGGTGTCAATGACCCGCACACCGGAGACATTAAGCAACAAAAGGAAGAACGAGATGGGGAAGTTGTAAAAGGTCAGTATTCCTTAGTGGAGCCCGACGGCTCTGTGAGGACAGTGGACTACGTAGCCGACTGGGAGACCGGTTTCCACGCTGATGTGCGCAACAGCAAAGACAATCAACACTAA

Protein

MVLILANALAYHDPDLNYHLSQVQKVSNCADSGYSYPAPGIQLTHSGINVAPAPAVVSQPTASIKYTPAIQYAAQPTYQTVESNYITAPVYTKELHGYATSAGLSSSASTTKTVTPLATYAQAPIIAKITAAPLIAKFSVAPARTTYYSQNNVQQASYASGSSAKASLYSNTVHQGPVVSQVFAAPTVRYAASPALKAQQNAQVDSTQYSTGVQYNQVQNLPALQIPPGIQYAAPSVSQVPVPRITQYFTPTQYSSGASYIASTAAQYLPTVKHAGAALNQVVVPISNGYSKGLSSAPAYSSASFTRHSSPAVAAYSRPAIAPVSTHYSTPVISHYSTPGVAQVPEYLGARSNYASTPSLTIGGHISSANSVKNVHTEFLENYDAHPRYAFEYGVNDPHTGDIKQQKEERDGEVVKGQYSLVEPDGSVRTVDYVADWETGFHADVRNSKDNQH

Uniprot

C0H6S1   A0A2H1VD53   A0A2W1C206   A0A212EXG8   A0A194PWQ4   I4DJZ9   + More
A0A194QWS1   A0A3S2NNT7   A0A0L7LIY6   B0W874   A0A182N9H6   A0A182VG63   A0A182GK67   A0A170YU97   A0A182WWB1   A0A182I6J0   A0A182LWW6   A0A182SQT7   A0A182Q6X3   A0A182PIQ7   A0A182RUI3   Q5TWJ2   A0A182WBB4   A0A182FFN8   A0A182JGU5   A0A084W6B0   E0W3J8  

Pubmed

19121390    19280704    28756777    22118469    26354079    22651552    + More
26227816    26483478    12364791    14747013    17210077    24438588    20566863   

EMBL

BABH01013334    BABH01013335    BR000580    FAA00582.1    ODYU01001904    SOQ38769.1    + More
KZ149892    PZC79006.1    AGBW02011787    OWR46134.1    KQ459586    KPI97796.1    AK401617    BAM18239.1    KQ461073    KPJ09754.1    RSAL01000021    RVE52421.1    JTDY01000931    KOB75395.1    DS231857    EDS38699.1    JXUM01069429    KQ562551    KXJ75638.1    GEMB01002950    JAS00253.1    APCN01003651    AXCM01005082    AXCN02000560    AAAB01008807    EAL41928.3    EDO64767.1    ATLV01020771    KE525307    KFB45754.1    DS235882    EEB20204.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000283053    UP000037510    + More
UP000002320    UP000075884    UP000075903    UP000069940    UP000249989    UP000076407    UP000075840    UP000075883    UP000075901    UP000075886    UP000075885    UP000075900    UP000007062    UP000075920    UP000069272    UP000075880    UP000030765    UP000009046   

PRIDE

C0H6S1   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6S1   A0A2H1VD53   A0A2W1C206   A0A212EXG8   A0A194PWQ4   I4DJZ9   + More
A0A194QWS1   A0A3S2NNT7   A0A0L7LIY6   B0W874   A0A182N9H6   A0A182VG63   A0A182GK67   A0A170YU97   A0A182WWB1   A0A182I6J0   A0A182LWW6   A0A182SQT7   A0A182Q6X3   A0A182PIQ7   A0A182RUI3   Q5TWJ2   A0A182WBB4   A0A182FFN8   A0A182JGU5   A0A084W6B0   E0W3J8  

KEGG

100379394    no KO assigned | (RefSeq) CPR79, BmorCPR79; cuticular protein RR-2 motif 79

GO

GO:0042302   GO:0031012   GO:0008270   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

Length:

453

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01186

Exp number, first 60 AAs:

0.00021

Total prob of N-in:

0.00141

outside

1  -  453

 

 

Pi

196.127531

Theta

159.90805

Tajima's D

0.685208

CLR

0.46354

CSRT

0.571521423928804

Interpretation

Uncertain