SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13020
Annotation
NA
Location in the cell
PlasmaMembrane   Reliability : 1.885
 

Sequence

CDS
ATGTTGATCATGACCATCATAGCCACCATGATCACCACAGGCATTTCAACCATAATGATCACCATGATCACCATGACCACCATGAACACCAAGCATATCACGGACACCATGGCCACGATGGACATCACGACCACCATGGACACCACGGACACCATGATCACCATGCTTCGTCATACCCTTCATACCAATTCTCCTACTCAGTTGATGATCACCACACCGGCGACCACAAATCCCAGTCAGAAACGCGCCATGATGACCACCACGGTTTCAACGCTGTCGTACATAACAGATTTGCCCACCACCATATCATCCCACACCATGATCACCATCATCATCACGATCATCATAACCATCACGATCACCATGAGCATCACGATCATCATGACCATCACGTACATCATGACCATCACGATCATCATGACCATCACGATCATGGACACCATGAGCATCATAGTCATCATGATGGGCATCATGAACACCACCATGATCATCATCACTAATGTTGAACAGATACAGAACAGATATCAAAGATACATCTATACGAATACTTTATCATTCAAAACACTTATGTATGATGCTGAAGACGACCGTTTCAAGCTCTCCAATTAA
Protein
MLIMTIIATMITTGISTIMITMITMTTMNTKHITDTMATMDITTTMDTTDTMITMLRHTLHTNSPTQLMITTPATTNPSQKRAMMTTTVSTLSYITDLPTTISSHTMITIIITIIITITITMSITIIMTITYIMTITIIMTITIMDTMSIIVIMMGIMNTTMIIITNVEQIQNRYQRYIYTNTLSFKTLMYDAEDDRFKLSN

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
202
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
74.48888
Exp number, first 60 AAs:
22.0876
Total prob of N-in:
0.33720
POSSIBLE N-term signal
sequence
outside
1  -  4
TMhelix
5  -  27
inside
28  -  107
TMhelix
108  -  130
outside
131  -  134
TMhelix
135  -  157
inside
158  -  202
 
 

Population Genetic Test Statistics

Pi
49.05188
Theta
143.124469
Tajima's D
-2.114591
CLR
1138.901857
CSRT
0.0100994950252487
Interpretation
Uncertain
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