SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13019
Pre Gene Modal
BGIBMGA000283
Annotation
cuticular_protein_RR-2_motif_81_precursor_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.146
 

Sequence

CDS
ATGATCGCTAAGGTGGTGATTTTGTTGAGCATAGCTGTGTGCGTGCTAGGAGGCGGCCATGCTACCTCAGAACAGAAAGTCGTAGTTCGACACAAGAAGATAATAAATGCTGACAAGAAATCGGACGAATACGCATGGTCGTATCCATCATACGAGTTCTCTTATAAAGTACATGATCCACACACACATGACAAAAAAGGACAATCCGAGAACAGAGAGGATGATGAGGTGAAAGGCGAATACTGGTTGATTCAACCTGATGGTCATAAACGTATCGTTTCTTACCATGGGGATAAGAAATCGGGTTTCAATGCCGACGTCAAATACTCCGAGCCCCACAAACATATTGATGAAGAAAAGAAATCTCACCACATCCCGCACTACCCTGAAGTAGAGCATAAAAACATTATTGTTGATTACAAAAAAGAAGAAAAAGAAGAAGGAGAAAAACAAGAAGAAGAAGAAGAACAGGATAACAAAGAAGAAGACAAAGACGGCCATTCTTCTGTTAATTTAGGTGAATACGAGCCACTGCCTTATCGAGCTCCTGTAGTACACAAGATCAGAGAAAACTACCACCATCCTCATTACTACAGAAAAAATAGAAGGTCCTAG
Protein
MIAKVVILLSIAVCVLGGGHATSEQKVVVRHKKIINADKKSDEYAWSYPSYEFSYKVHDPHTHDKKGQSENREDDEVKGEYWLIQPDGHKRIVSYHGDKKSGFNADVKYSEPHKHIDEEKKSHHIPHYPEVEHKNIIVDYKKEEKEEGEKQEEEEEQDNKEEDKDGHSSVNLGEYEPLPYRAPVVHKIRENYHHPHYYRKNRRS

Summary

Pfam
PF00379   Chitin_bind_4
Interpro
IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.993160
 
 
Length:
204
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9.93617
Exp number, first 60 AAs:
9.93617
Total prob of N-in:
0.37660
outside
1  -  204
 
 

Population Genetic Test Statistics

Pi
319.879483
Theta
222.975725
Tajima's D
1.361018
CLR
0.002794
CSRT
0.750662466876656
Interpretation
Uncertain
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