Gene

KWMTBOMO13014

Pre Gene Modal

BGIBMGA000277

Annotation

cuticular_protein_RR-2_motif_87_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):6528360-6529333      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.451

CDS

ATGTTCAGCAAAATTGTAACTTTCGGTGCTTTCTTGGCCGCGGCCAATGCCGGACTCTACGGTCATGGACATGCCGTGTCCTCCCAAAGCATCATTCGTCATGATGAGGCTCCCCTGCACTACGCCCACGCTGCCCCAGTGGCGCACTATGCTGCTCCCATCGCCCACTACGCCGCCCCTATTGCCCACTACGCTGCTCCAGTTGCCCACTACGCCTCCCCAGTTGCCCACTACGCCGGTCACGATGAATATGCTCATCCCAAATACGACTTCGCATACTCAGTAGCTGACCCCCACACCGGCGACCACAAGTCCCAGCATGAGTCCCGCGACGGTGACTCCGTGCACGGCTCCTACTCCCTCGTCCAGCCCGATGGTTCTGTCCGCAAGGTCGATTACACCGCTGATGAGCACCACGGTTTCAACGCTGTAGTGCACAACTCCGCCCCCTCCGTGCACCCAATTGCTGCCCATCATCACCACTACTGA

Protein

MFSKIVTFGAFLAAANAGLYGHGHAVSSQSIIRHDEAPLHYAHAAPVAHYAAPIAHYAAPIAHYAAPVAHYASPVAHYAGHDEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTADEHHGFNAVVHNSAPSVHPIAAHHHHY

Uniprot

C0H6S9   C0H6T1   C0H6S8   C0H6T0   H9ISP8   A0A2W1BZW6   + More
A0A3S2NJA9   A0A212F897   A0A194PXP1   A0A194QWA3   A0A2W1C1Z6   A0A212F8A2   I4DMR3   A0A2W1BZH7   I4DMR2   A0A194PWU5   A0A194QW46   A0A194PWQ0   A0A2H1VD38   A0A2H1VDB1   I4DMH3   I4DJZ8   C0H6S7   H9ISQ2   A0A194QWS6   A0A2W1C1K9   A0A194PWP0   A0A2H1VP46   A0A194QXT3   I4DK02   A0A194PWT5   A0A194Q2Z8   A0A2W1C0H3   A0A194QWT7  

Pubmed

19121390    19280704    28756777    22118469    26354079    22651552    + More

EMBL

BABH01013339    BR000588    FAA00590.1    BR000590    FAA00592.1    BR000587    + More
FAA00589.1    BABH01013340    BABH01013341    BR000589    FAA00591.1    KZ149892    PZC78995.1    RSAL01000021    RVE52429.1    AGBW02009770    OWR49966.1    KQ459586    KPI97793.1    KQ461073    KPJ09757.1    PZC78996.1    OWR49967.1    AK402581    BAM19203.1    PZC78994.1    AK402580    BAM19202.1    KPI97792.1    KPJ09758.1    KPI97791.1    ODYU01001904    SOQ38763.1    SOQ38766.1    AK402491    BAM19113.1    AK401616    BAM18238.1    KPI97790.1    BR000586    FAA00588.1    KPJ09759.1    PZC79000.1    KPI97781.1    ODYU01003605    SOQ42578.1    KPJ09770.1    AK401620    BAM18242.1    KPI97782.1    KPI97780.1    PZC78997.1    KPJ09769.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000053240   

PRIDE

C0H6S9    C0H6T1    C0H6S8    C0H6T0    H9ISP8    C0H6S7    + More
H9ISQ2   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6S9   C0H6T1   C0H6S8   C0H6T0   H9ISP8   A0A2W1BZW6   + More
A0A3S2NJA9   A0A212F897   A0A194PXP1   A0A194QWA3   A0A2W1C1Z6   A0A212F8A2   I4DMR3   A0A2W1BZH7   I4DMR2   A0A194PWU5   A0A194QW46   A0A194PWQ0   A0A2H1VD38   A0A2H1VDB1   I4DMH3   I4DJZ8   C0H6S7   H9ISQ2   A0A194QWS6   A0A2W1C1K9   A0A194PWP0   A0A2H1VP46   A0A194QXT3   I4DK02   A0A194PWT5   A0A194Q2Z8   A0A2W1C0H3   A0A194QWT7  

KEGG

100379387    no KO assigned | (RefSeq) CPR87, BmorCPR87; cuticular protein RR-2 motif 87

GO

GO:0042302   GO:0016021   GO:0008270   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

SignalP

Position:   1 - 17,         Likelihood:  0.702542

 

 

Length:

162

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.24157

Exp number, first 60 AAs:

5.08226

Total prob of N-in:

0.16057

outside

1  -  162

 

 

Pi

206.12727

Theta

158.119095

Tajima's D

0.186724

CLR

72.711797

CSRT

0.418179091045448

Interpretation

Uncertain