Silkworm Genome Informatics Database

Gene

KWMTBOMO13011 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000276

Annotation

Cuticle_protein_19_[Papilio_machaon]

Location

Bomo_Chr22(+):6515650-6520760 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.298 Nuclear Reliability : 1.041 PlasmaMembrane Reliability : 1.219

CDS

ATGTTCAGTAAAATCGTAGCTTTTGGTGCCCTCTTGGCTGCAGCCAATGCTGGCCTTTACAGTCACGGACATGCTGTGTCCTCCCAGAGCATCATACGTCATGATGAGGCTCCCCTGCACTACGCCCACGCTGCCCCAGTGGCGCACTATGCTGCTCCCATCGCCCACTACGCCGCCCCTGTTGCCCACTACGCCACCCCAGTGGCTCACTATGCCGCTCCTCTGGGCCACTACAGTGGTCATGATGAATACGCTCATCCCAAATACGACTTCGCGTACTCAGTAGCTGACCCCCACACCGGCGACCACAAGTCCCAGCATGAGTCCCGCGACGGTGACTCCGTGCACGGCTCCTACTCCCTCGTCCAGCCCGATGGTTCTGTCCGCAAGGTCGATTACACCGCTGATGAGCACCACGGGTCGCTCCGTGACCATCACCGGGAGGAGACTGTCTCCTCGCAGGGGCCGGAGCTGGACGAACGCCCTCCTCCGACACTCGGCTCAGCGGCGGCGACACGGCTCAAGCCTATAATTATAACTTTCACCGCACTCCTGGCTGCAGCTAATGCTGGCCTTTACGGTCATGGACATGCCGTGTCCTCCCAAAACATCATTCGTCATGATGAGGCTTCCCTGCACTACGCCCAAGCTGCTCCAGTAGCGCACTATGCCGCACCCATCGCCCACTACGCAGCCCCTATTGCCCACTACGCCGCCCCAGTGGCTCACTATGCCACTCCTCTGGCCCACTACAGTGGTCATCATGAATACGCTCATCCCAAATACGACTTCGCGTACTCAGTAGCTGACCCCCACACCGGCGACCACAAGTCCCAGCATGAGTCCCGAGACGGTGACTCCGTGCACGGCTCCTACTCCCTGGTCCAACCTGACGGCTCCGTCCGCAAGGTCGACTACACCGCTGATGAGCATCATGGCTTCAACGCTATAGTTCACAACTCGGCTCCCTCCGTACATCCCATCGCCCACCACCATCATTACTGA

Protein

MFSKIVAFGALLAAANAGLYSHGHAVSSQSIIRHDEAPLHYAHAAPVAHYAAPIAHYAAPVAHYATPVAHYAAPLGHYSGHDEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTADEHHGSLRDHHREETVSSQGPELDERPPPTLGSAAATRLKPIIITFTALLAAANAGLYGHGHAVSSQNIIRHDEASLHYAQAAPVAHYAAPIAHYAAPIAHYAAPVAHYATPLAHYSGHHEYAHPKYDFAYSVADPHTGDHKSQHESRDGDSVHGSYSLVQPDGSVRKVDYTADEHHGFNAIVHNSAPSVHPIAHHHHY

Uniprot

A0A194QWA3 A0A2H1VDB1 A0A194PWQ0 A0A194Q2Z8 A0A212F8C2 A0A212EJB4 + More
A0A194PYF2

Pubmed

26354079 22118469

EMBL

KQ461073 KPJ09757.1 ODYU01001904 SOQ38766.1 KQ459586 KPI97791.1 + More
KPI97780.1 AGBW02009770 OWR49959.1 AGBW02014485 OWR41592.1 KPI97779.1

Proteomes

UP000053240 UP000053268 UP000007151

Pfam

PF00379 Chitin_bind_4

Interpro

IPR000618 Insect_cuticle + More
IPR031311 CHIT_BIND_RR_consensus

ProteinModelPortal

A0A194QWA3 A0A2H1VDB1 A0A194PWQ0 A0A194Q2Z8 A0A212F8C2 A0A212EJB4 + More
A0A194PYF2

KEGG

100379386 no KO assigned | (RefSeq) CPR88, BmorCPR88; cuticular protein RR-2 motif 88

GO

GO:0042302 GO:0016021 GO:0008270 GO:0006412 GO:0043565 GO:0007155 GO:0005515 GO:0008237 GO:0008152 GO:0016491 GO:0015930

SignalP

Position: 1 - 17, Likelihood: 0.886211

Length:

334

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

6.38772

Exp number, first 60 AAs:

3.14667

Total prob of N-in:

0.12130

outside

1 - 334

Pi

236.259451

Theta

208.210305

Tajima's D

0.718748

CLR

0.479179

CSRT

0.583170841457927

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
28467696	YDFAYSVADGHSGDNK	100.00	8e-05
28467696	YDFAYSVADGHSGDNK	100.00	8e-05

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree