Gene
KWMTBOMO13009 Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000274
Annotation
PREDICTED:_cuticular_protein_RR-2_motif_90_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic Reliability : 1.201 Nuclear Reliability : 1.341
Sequence
CDS
ATGATCGTCAATATTTTTGTGGCTGTTTTTATCTTAGGCGTCTCCGCAATTAATGTTGTAACTGGTGCTTCATTCTCTAAAGTATTCGTACAAGGCGGACGAGAAGTAGTGCCAGTTGAATACTTACAATATGGCGCTCCATCAATCGCCGTAGCAGGATCACAACTAGCCCAAATATCTGCAGCCCCTGTAGGATCAGTAGTACCAAATCTAGTCGCGCCATGTGGAACGCCCTGTATATATCCGGGGCAATCAATAGCCCCGGCCACTACAAATGTAGTAACGTATAAGTCCAGTGTTCCAGTAGTTGTCACAAATAAAGAGGACGCTGCCGGTTACGAATATTCATATTTAGTGTACGATGAGAACACAGGTGATCATAAAACACAACACGAGCTGAGTGACGGGTCAGTGGTTCGCGGAGGATACTCCCTTATTCAACCTGATGGTTATATTCGAGAAGTAAAATACGTAGCTGATGATCTGACAGGGTTTAACGCGGTTGTCAAAAAGTTCTTGCCTGTAAACGTAGAAAAGAAAATAGAGCAACACGAAAAATCGCATCCAGACCCACCGTGCCATGAAGTGAAAAATGAACAATTAAAGGTAGAAACCAAAACAGAACACAGTGAGAGTCATCATGCCCCAATCGTAGAAGAGCATCATGAAACGAAAAGTGAAGAAAGTTCTGAGTCATCAAGTGAAGAATCTCATGAAGAGAAACCTACCGAAAACAACCATGAAGAAAAAGAAAGTTCTGAATCCGAATCAACTGAAGAATCACACGAAGAAAAACATAGTGAGGAAGCCCACCATGAAGTCGTTGCTGAAGCACCTCACGAAGAACACAGTGAACCCTTAAAAGAATTATCTACTGAGAGCCACGAATCATCAAGCGAAGAACACTCAGCAGAAGAACATCACGTAGAGCCATCCAAGCATGAAGCTCTTCATGACGCACCGGCGCATATTGAACATGTAGAAGAAACCTCACACGAAGAAGAGAAACATGAAACGAGTCCGCACGACGCTGAAGAACATACCCATGAACATACCGAAACAGAAACGCACGAACACATTTCAATAAATGAAGCAGAGCACAATGCTCAACCGCAATACAACGATATCCTTAAATGTGTTAATGCAGCGATTAATACTGCGGCCGGAGTTGCTCCCCAAAGATCTGAGTCTCCTCTGACGTACATAATACTGAACAAGCCGTGCTAA
Protein
MIVNIFVAVFILGVSAINVVTGASFSKVFVQGGREVVPVEYLQYGAPSIAVAGSQLAQISAAPVGSVVPNLVAPCGTPCIYPGQSIAPATTNVVTYKSSVPVVVTNKEDAAGYEYSYLVYDENTGDHKTQHELSDGSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKKFLPVNVEKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPIVEEHHETKSEESSESSSEESHEEKPTENNHEEKESSESESTEESHEEKHSEEAHHEVVAEAPHEEHSEPLKELSTESHESSSEEHSAEEHHVEPSKHEALHDAPAHIEHVEETSHEEEKHETSPHDAEEHTHEHTETETHEHISINEAEHNAQPQYNDILKCVNAAINTAAGVAPQRSESPLTYIILNKPC
Summary
Uniprot
ProteinModelPortal
Ontologies
GO
Topology
SignalP
Position: 1 - 16,
Likelihood: 0.879998
Length:
408
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.23436
Exp number, first 60 AAs:
21.22462
Total prob of N-in:
0.97222
POSSIBLE N-term signal
sequence
inside
1 - 1
TMhelix
2 - 24
outside
25 - 408
Population Genetic Test Statistics
Pi
43.259338
Theta
150.079107
Tajima's D
-0.618407
CLR
161.527749
CSRT
0.216589170541473
Interpretation
Uncertain
