Gene

KWMTBOMO13003  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000266

Annotation

cuticular_protein_RR-2_motif_98_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):6448140-6449261      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.778 PlasmaMembrane   Reliability : 1.207

CDS

ATGTTCTCCAAAATCGTAGTACTGTGCGCTTTGGTCGCGGTGTCGAAAGCTGGACTTCTGGCTGCTCCCGTGCACTACTCTCCCGCTGAAGCCGTTTCTTCCCAAAGCATTGTGCGCCATGACCAGCCTCAGCTCCACACTGCCAAGCTCGCTGTTGCTACCCCTGTAGCCTACCACGCGGCCCCTGTAGCGTACCAGGCTGCCCCAGTTGCCTACCACGCGGCCCCTGTAGCGTACCAGGCCGCCCCAGTTGCCTACCACACTTCTCCACTCCGCTACTCCTCGGCTGAATCTGTCTCGTCCCAAAACATCGTCCGTCATGACCAGCCCCAGACTATCCAATACGCCGCTCCTGTAGCCAAGTTGGCCGTCGCTGCTCCCGTAGCTTACCACGCTGCTCCCGCCCCTGTTACCTACCACGCCGCCCCTGCCGCCGTGTCTTACCACTCTGCCCCAGTAGCCAAAATTGTAGCTCACCAAGCTGAGGAAATTGCCTACCCCAAGTACGAGTACAACTACTCCGTAGCTGACGGTCACTCCGGCGACAACAAGTCCCAACAAGAGGTACGCGACGGTGATGTTGTGAAGGGTTCATACTCTTTCCACGAAGCTGACGGCTCTATCAGAACTGTTGAATACACCGCTGACGACCACAGCGGCTTCAACGCGGTCGTCCACAACACCGCCCCCACAGCCGCCCCTACTCACATCAAGGCTGTGCCCGCTCTTCAGTACTACCACCACTAA

Protein

MFSKIVVLCALVAVSKAGLLAAPVHYSPAEAVSSQSIVRHDQPQLHTAKLAVATPVAYHAAPVAYQAAPVAYHAAPVAYQAAPVAYHTSPLRYSSAESVSSQNIVRHDQPQTIQYAAPVAKLAVAAPVAYHAAPAPVTYHAAPAAVSYHSAPVAKIVAHQAEEIAYPKYEYNYSVADGHSGDNKSQQEVRDGDVVKGSYSFHEADGSIRTVEYTADDHSGFNAVVHNTAPTAAPTHIKAVPALQYYHH

Uniprot

C0H6U0   Q9BPR7   C0H6U1   C0H6T7   Q9BPR6   A0A2W1C485   + More
A0A2W1BV71   A0A212F1C1   A0A2H1WU56   A0A2A4J4N1   A0A2H1W3Y2   A0A2W1BVB0   A0A194QWT1   A0A2A4J2S9   A0A2A4IXI8   A0A2A4J4D6   A0A194QXS8   A0A2W1C0G8   C0H6U5   C0H6U4   C0H6U3   H9IT50   C0H6U6   Q9BPR8   Q9BPR9   C0H6U7   A0A212F1A8   I4DK02   A0A194PWP0   B2DBM5   A0A194Q2Z8   A0A194QXT3   A0A194QW55   A0A194PWT5   A0A194PYF2   A0A194QWT7   A0A212F8A9   A0A212F891   A0A212F9Z8   A0A212F8A0   A0A212F8C2  

Pubmed

19121390    19280704    11483438    28756777    22118469    26354079    + More
22651552    18712529   

EMBL

BABH01013343    BR000599    FAA00601.1    AB047480    BAB32477.1    BR000600    + More
FAA00602.1    BR000596    FAA00598.1    AB047481    BAB32478.1    KZ149892    PZC78983.1    PZC78982.1    AGBW02010913    OWR47527.1    ODYU01011083    SOQ56599.1    NWSH01003396    PCG66373.1    ODYU01006144    SOQ47743.1    PZC78988.1    KQ461073    KPJ09764.1    NWSH01003366    PCG66457.1    NWSH01005898    PCG63860.1    PCG66374.1    KPJ09765.1    PZC78987.1    BR000604    FAA00606.1    BR000603    FAA00605.1    BR000602    FAA00604.1    BABH01013344    BR000605    FAA00607.1    AB047478    BAB32476.1    AB047477    BAB32475.1    BR000606    FAA00608.1    OWR47528.1    AK401620    BAM18242.1    KQ459586    KPI97781.1    AB264709    BAG30784.1    KPI97780.1    KPJ09770.1    KPJ09768.1    KPI97782.1    KPI97779.1    KPJ09769.1    AGBW02009770    OWR49961.1    OWR49962.1    AGBW02009537    OWR50562.1    OWR49960.1    OWR49959.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000053268   

PRIDE

C0H6U0    Q9BPR7    C0H6U1    C0H6T7    Q9BPR6   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6U0   Q9BPR7   C0H6U1   C0H6T7   Q9BPR6   A0A2W1C485   + More
A0A2W1BV71   A0A212F1C1   A0A2H1WU56   A0A2A4J4N1   A0A2H1W3Y2   A0A2W1BVB0   A0A194QWT1   A0A2A4J2S9   A0A2A4IXI8   A0A2A4J4D6   A0A194QXS8   A0A2W1C0G8   C0H6U5   C0H6U4   C0H6U3   H9IT50   C0H6U6   Q9BPR8   Q9BPR9   C0H6U7   A0A212F1A8   I4DK02   A0A194PWP0   B2DBM5   A0A194Q2Z8   A0A194QXT3   A0A194QW55   A0A194PWT5   A0A194PYF2   A0A194QWT7   A0A212F8A9   A0A212F891   A0A212F9Z8   A0A212F8A0   A0A212F8C2  

KEGG

100379377    no KO assigned | (RefSeq) CPR98, BmorCPR98; cuticular protein RR-2 motif 98

GO

GO:0042302   GO:0016021   GO:0005761   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

SignalP

Position:   1 - 21,         Likelihood:  0.955892

 

 

Length:

248

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8.00987

Exp number, first 60 AAs:

7.80486

Total prob of N-in:

0.36781

outside

1  -  248

 

 

Pi

287.512174

Theta

189.792789

Tajima's D

1.469305

CLR

0.532392

CSRT

0.775711214439278

Interpretation

Uncertain