Gene

KWMTBOMO13000  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000264

Annotation

cuticular_protein_RR-2_motif_100_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):6434880-6435705      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.618 PlasmaMembrane   Reliability : 1.06

CDS

ATGATTTCCAAAATCGTTGTACTGTGTGCCTTTGTGGCAGTCTCGCAGGCCGGTCTCTTGGCTGCGCCCGTGCACTACTCTCCCGCTGAGGCTGTTTCCTCCCAAAGCATCGTACGTCATGATCAGGCTCACGGCACTAAGCTTGTAGCTCCCGTTGCCAAGCTCGCCATTGCCGCACCTGTTGCATACCACGCTGCTCCAGCTCCAATCGCCTACCACGCTGCCCCCGCTCCCATTGCCTACCATGCCCCCATCGCCAAAGTGCTAGCTCACCGTGAAGACCAAGAAATCGCTTATCCAAAATACGAGTACAACTACTCAGTAGCTGACGGTCACTCCGGCGACAACAAGTCCCAACAAGAAGTCCGCGATGGCGATGTTGTAAAGGGTTCATACTCCTTCCACGAAGCTGACGGCTCTATCAGAACTGTTGAGTACACCGCTGACGACCACAACGGTTTCAACGCGGTCGTCCACAACACTGCCCCTACCGCTGCCCCCACACACATCAAGGCTTTGCCTGCACTCCAATACTACCATCACTAA

Protein

MISKIVVLCAFVAVSQAGLLAAPVHYSPAEAVSSQSIVRHDQAHGTKLVAPVAKLAIAAPVAYHAAPAPIAYHAAPAPIAYHAPIAKVLAHREDQEIAYPKYEYNYSVADGHSGDNKSQQEVRDGDVVKGSYSFHEADGSIRTVEYTADDHNGFNAVVHNTAPTAAPTHIKALPALQYYHH

Uniprot

C0H6U2   H9ISN7   C0H6T8   C0H6T9   C0H6T7   Q9BPR6   + More
C0H6U1   C0H6U0   Q9BPR7   B2DBJ3   A0A194PWP3   I4DRA3   I4DJP1   A0A212F1C1   A0A194QWT1   A0A194QXS8   A0A2W1BXD1   A0A2A4J2S9   I4DRA2   A0A212F1A8   A0A2W1BV71   A0A2W1BZV6   I4DKM4   A0A194Q302   B2DBK0   A0A2W1BVB0   A0A194PYF6   A0A2W1C485   A0A0N1IPH5   A0A212EJB4   A0A2H1W3Y2   A0A2A4J4D6   A0A2A4J4N1   A0A2H1WU56   A0A2H1VP46   A0A2W1BVH0   A0A2A4IXI8   A0A2W1C0G8   C0H6U5   A0A2H1VQS4   H9IT50   C0H6U4   C0H6U6   Q9BPR9   A0A2W1BZH0   Q9BPR8   I4DMR3   C0H6U3   C0H6U7   I4DK03   I4DMH3   C0H6S9   C0H6S8   A0A212F891   I4DJZ8   A0A194PWQ0   A0A194QW46   A0A194R1N5   A0A194PWP0   A0A212F8A9   A0A212F9Z8   A0A194QWS6  

Pubmed

19280704    19121390    11483438    18712529    26354079    22651552    + More
22118469    28756777   

EMBL

BR000601    FAA00603.1    BABH01013343    BR000597    FAA00599.1    BR000598    + More
FAA00600.1    BR000596    FAA00598.1    AB047481    BAB32478.1    BR000600    FAA00602.1    BR000599    FAA00601.1    AB047480    BAB32477.1    AB264676    BAG30752.1    KQ459586    KPI97786.1    AK405036    BAM20443.1    AK401509    BAM18131.1    AGBW02010913    OWR47527.1    KQ461073    KPJ09764.1    KPJ09765.1    KZ149892    PZC78981.1    NWSH01003366    PCG66457.1    AK405035    BAM20442.1    OWR47528.1    PZC78982.1    PZC78985.1    AK401842    BAM18464.1    KPI97785.1    AB264683    BAG30759.1    PZC78988.1    KPI97784.1    PZC78983.1    KQ460333    KPJ15643.1    AGBW02014485    OWR41592.1    ODYU01006144    SOQ47743.1    NWSH01003396    PCG66374.1    PCG66373.1    ODYU01011083    SOQ56599.1    ODYU01003605    SOQ42578.1    PZC78978.1    PZC78979.1    NWSH01005898    PCG63860.1    PZC78987.1    BR000604    FAA00606.1    ODYU01003855    SOQ43136.1    BR000603    FAA00605.1    BABH01013344    BR000605    FAA00607.1    AB047477    BAB32475.1    PZC78984.1    AB047478    BAB32476.1    AK402581    BAM19203.1    BR000602    FAA00604.1    BR000606    FAA00608.1    AK401621    BAM18243.1    AK402491    BAM19113.1    BABH01013339    BR000588    FAA00590.1    BR000587    FAA00589.1    AGBW02009770    OWR49962.1    AK401616    BAM18238.1    KPI97790.1    KPI97791.1    KPJ09758.1    KPJ09766.1    KPI97781.1    OWR49961.1    AGBW02009537    OWR50562.1    KPJ09759.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000218220   

PRIDE

C0H6U2    H9ISN7    C0H6T7    Q9BPR6    C0H6U1    C0H6U0    + More
Q9BPR7    C0H6S9    C0H6S8   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6U2   H9ISN7   C0H6T8   C0H6T9   C0H6T7   Q9BPR6   + More
C0H6U1   C0H6U0   Q9BPR7   B2DBJ3   A0A194PWP3   I4DRA3   I4DJP1   A0A212F1C1   A0A194QWT1   A0A194QXS8   A0A2W1BXD1   A0A2A4J2S9   I4DRA2   A0A212F1A8   A0A2W1BV71   A0A2W1BZV6   I4DKM4   A0A194Q302   B2DBK0   A0A2W1BVB0   A0A194PYF6   A0A2W1C485   A0A0N1IPH5   A0A212EJB4   A0A2H1W3Y2   A0A2A4J4D6   A0A2A4J4N1   A0A2H1WU56   A0A2H1VP46   A0A2W1BVH0   A0A2A4IXI8   A0A2W1C0G8   C0H6U5   A0A2H1VQS4   H9IT50   C0H6U4   C0H6U6   Q9BPR9   A0A2W1BZH0   Q9BPR8   I4DMR3   C0H6U3   C0H6U7   I4DK03   I4DMH3   C0H6S9   C0H6S8   A0A212F891   I4DJZ8   A0A194PWQ0   A0A194QW46   A0A194R1N5   A0A194PWP0   A0A212F8A9   A0A212F9Z8   A0A194QWS6  

KEGG

100379376    no KO assigned | (RefSeq) CPR100, BmorCPR100; cuticular protein RR-2 motif 100

GO

GO:0042302   GO:0016021   GO:0005761   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

SignalP

Position:   1 - 21,         Likelihood:  0.960719

 

 

Length:

181

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

16.37559

Exp number, first 60 AAs:

15.27554

Total prob of N-in:

0.69753

POSSIBLE N-term signal

sequence

outside

1  -  181

 

 

Pi

396.318343

Theta

244.339372

Tajima's D

1.945383

CLR

0.000922

CSRT

0.874056297185141

Interpretation

Uncertain