Gene

KWMTBOMO12998  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000428

Annotation

cuticular_protein_RR-2_motif_101_precursor_[Bombyx_mori]

Location

Bomo_Chr22(-):6427398-6428529      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.579 PlasmaMembrane   Reliability : 1.306

CDS

ATGTTCTCTAAAATCGTAGCCTTGAGCGCTGTGCTGGCAGTGAGTGCTGCAGGCCTCCTGCCCGAGCCGCACTACTCTTCGGCAGCAGCTGTCTCCTCTCAGAGCATCGTCCGTCACGACCAGCCACAGCTCCATGCCACCAAATATGTAGCCGCCGCTCCAGTAGCCGTCCACGCTGCTCCTGTGGCATACCACGCAGCCCCTGTCGCCTACCACTCCGCCCCCGCTCACTACTCGTCTGCTGGCGCCGTGTCCTCCCAGACCATCCTGCGTCACGACCAGCCTCACGCCACCAACTACATCGCCGCCGCTGCTCCCGTCCACTACGCCGCCGCTGGCCCCGTCCACTACGCCGCTCCTGTTGCTAAAGTGATTGCTCCCGCCCACAAAGTGCTTGTATCTGCTCACCATGAAGAGGAATACGCTCATCCCAAATACGACTTCGCCTACTCTGTTGCTGACGGACACAGCGGCGACAACAAGTCCCAGCACGAGTCCCGCGACGGCGACGCTGTGCACGGCGAGTACACTCTGGTTGAAGCTGACGGTTCAGTGCGCAAGGTTGAGTACACCGCTGATGACCACCACGGCTTCAACGCTGTCGTCAGCAACACCGCCCCCGCTCACCACGTAGCCCATGCTGCCCACGCACCTGTCCTCTTGGCTCATCATTGA

Protein

MFSKIVALSAVLAVSAAGLLPEPHYSSAAAVSSQSIVRHDQPQLHATKYVAAAPVAVHAAPVAYHAAPVAYHSAPAHYSSAGAVSSQTILRHDQPHATNYIAAAAPVHYAAAGPVHYAAPVAKVIAPAHKVLVSAHHEEEYAHPKYDFAYSVADGHSGDNKSQHESRDGDAVHGEYTLVEADGSVRKVEYTADDHHGFNAVVSNTAPAHHVAHAAHAPVLLAHH

Uniprot

C0H6U3   C0H6U6   Q9BPR9   Q9BPR8   C0H6U7   C0H6U4   + More
C0H6U5   H9IT50   I4DK02   A0A194PWP0   A0A194Q2Z8   A0A194PWT5   A0A194QWT7   B2DBM5   A0A194PYF2   A0A194QW55   C0H6U1   Q9BPR7   C0H6U0   A0A2W1C485   A0A2W1BV71   A0A2H1W3Y2   A0A2A4IXI8   A0A2A4J4N1   A0A2H1WU56   A0A2W1C0G8  

Pubmed

19121390    19280704    11483438    22651552    26354079    18712529    + More
28756777   

EMBL

BABH01013343    BR000602    FAA00604.1    BABH01013344    BR000605    FAA00607.1    + More
AB047477    BAB32475.1    AB047478    BAB32476.1    BR000606    FAA00608.1    BR000603    FAA00605.1    BR000604    FAA00606.1    AK401620    BAM18242.1    KQ459586    KPI97781.1    KPI97780.1    KPI97782.1    KQ461073    KPJ09769.1    AB264709    BAG30784.1    KPI97779.1    KPJ09768.1    BR000600    FAA00602.1    AB047480    BAB32477.1    BR000599    FAA00601.1    KZ149892    PZC78983.1    PZC78982.1    ODYU01006144    SOQ47743.1    NWSH01005898    PCG63860.1    NWSH01003396    PCG66373.1    ODYU01011083    SOQ56599.1    PZC78987.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220   

PRIDE

C0H6U1    Q9BPR7    C0H6U0   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6U3   C0H6U6   Q9BPR9   Q9BPR8   C0H6U7   C0H6U4   + More
C0H6U5   H9IT50   I4DK02   A0A194PWP0   A0A194Q2Z8   A0A194PWT5   A0A194QWT7   B2DBM5   A0A194PYF2   A0A194QW55   C0H6U1   Q9BPR7   C0H6U0   A0A2W1C485   A0A2W1BV71   A0A2H1W3Y2   A0A2A4IXI8   A0A2A4J4N1   A0A2H1WU56   A0A2W1C0G8  

KEGG

100379375    no KO assigned | (RefSeq) CPR101, BmorCPR101; cuticular protein RR-2 motif 101

GO

GO:0042302   GO:0016021   GO:0005761   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

SignalP

Position:   1 - 18,         Likelihood:  0.898969

 

 

Length:

224

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.781899999999999

Exp number, first 60 AAs:

0.65079

Total prob of N-in:

0.05883

outside

1  -  224

 

 

Pi

156.838266

Theta

104.890659

Tajima's D

1.068146

CLR

0.345569

CSRT

0.680165991700415

Interpretation

Uncertain