Gene

KWMTBOMO12997  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000430

Annotation

cuticular_protein_RR-2_motif_102_precursor_[Bombyx_mori]

Location

Bomo_Chr22(-):6423497-6424519      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.825 PlasmaMembrane   Reliability : 1.275

CDS

ATGTTCTCTAAAATCGTAGCCTTGACCGCTGTGCTGGCAGTGAGTTCTGCAGGTCTCCTGCCCGAGCCGCACTATTCTTCGGCAGCAGCTGTCTCCTCTCAGAGCATCGTGCGTCACGACCAGCCACAGCTCCATGCCACCAAATATGTAGCCGCCGCTCCAGTAGCCGTCCACGCCGCTCCTGTAGCATACCACGCAGCTCCTGTCGCCTACCACTCCGCCCCCGCTCACTACTCGTCTGCTGGCGCCGTCTCCTCCCAGACCATCCTGCGTCACGACCAGCCTCACGCCACCAACTACATCGCCGCCGCTGCTCCCGTCCACTACGCTAGCCCCGTCCACTATGCCGCTCCTGTCGCTAAAGTGATCACTCCCGCCCACAAAGTGCTTTTATCTGCTCATCATGAAGAGGAATACGCTCACCCCAAATACGACTTCACCTACTCTGTTGCTGACGGACACAGCGGCGACAACAAGTCCCAGCACGAGTCCCGCGACGGTGACGCTGTGCACGGGGAGTACACTCTGCTTGAAGCTGACGGTTCAGTGCGCAAAGTTGAGTACACCGCTGACGACCATCACGGCTTCAACGCTGTCGTCAGCAACACCGCCCCCGCTCACCACGTAGCTCATGCTGCCCACGCACCTGTCCTCTTGGCTCATCATTGA

Protein

MFSKIVALTAVLAVSSAGLLPEPHYSSAAAVSSQSIVRHDQPQLHATKYVAAAPVAVHAAPVAYHAAPVAYHSAPAHYSSAGAVSSQTILRHDQPHATNYIAAAAPVHYASPVHYAAPVAKVITPAHKVLLSAHHEEEYAHPKYDFTYSVADGHSGDNKSQHESRDGDAVHGEYTLLEADGSVRKVEYTADDHHGFNAVVSNTAPAHHVAHAAHAPVLLAHH

Uniprot

C0H6U4   C0H6U6   H9IT50   Q9BPR8   Q9BPR9   C0H6U5   + More
C0H6U7   C0H6U3   I4DK02   A0A194PWP0   A0A194Q2Z8   A0A194PWT5   B2DBM5   Q9BPR7   A0A194QWT7   C0H6U1   C0H6U0   I4DJP1   B2DBK0   A0A194PYF6   A0A194QW55   A0A194PYF2   A0A2W1C485   A0A2W1BV71   A0A2A4IXI8   A0A2A4J4N1   A0A212F8A9   A0A2W1C0G8   A0A2H1W3Y2   A0A212F1A8   A0A2H1WU56  

Pubmed

19280704    19121390    11483438    22651552    26354079    18712529    + More
28756777    22118469   

EMBL

BR000603    FAA00605.1    BABH01013344    BR000605    FAA00607.1    BABH01013343    + More
AB047478    BAB32476.1    AB047477    BAB32475.1    BR000604    FAA00606.1    BR000606    FAA00608.1    BR000602    FAA00604.1    AK401620    BAM18242.1    KQ459586    KPI97781.1    KPI97780.1    KPI97782.1    AB264709    BAG30784.1    AB047480    BAB32477.1    KQ461073    KPJ09769.1    BR000600    FAA00602.1    BR000599    FAA00601.1    AK401509    BAM18131.1    AB264683    BAG30759.1    KPI97784.1    KPJ09768.1    KPI97779.1    KZ149892    PZC78983.1    PZC78982.1    NWSH01005898    PCG63860.1    NWSH01003396    PCG66373.1    AGBW02009770    OWR49961.1    PZC78987.1    ODYU01006144    SOQ47743.1    AGBW02010913    OWR47528.1    ODYU01011083    SOQ56599.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151   

PRIDE

Q9BPR7    C0H6U1    C0H6U0   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6U4   C0H6U6   H9IT50   Q9BPR8   Q9BPR9   C0H6U5   + More
C0H6U7   C0H6U3   I4DK02   A0A194PWP0   A0A194Q2Z8   A0A194PWT5   B2DBM5   Q9BPR7   A0A194QWT7   C0H6U1   C0H6U0   I4DJP1   B2DBK0   A0A194PYF6   A0A194QW55   A0A194PYF2   A0A2W1C485   A0A2W1BV71   A0A2A4IXI8   A0A2A4J4N1   A0A212F8A9   A0A2W1C0G8   A0A2H1W3Y2   A0A212F1A8   A0A2H1WU56  

KEGG

100379374    no KO assigned | (RefSeq) CPR102, BmorCPR101, BmorCPR102; cuticular protein RR-2 motif 102

GO

GO:0042302   GO:0016021   GO:0005761   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

SignalP

Position:   1 - 17,         Likelihood:  0.896805

 

 

Length:

222

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.32478

Exp number, first 60 AAs:

0.26957

Total prob of N-in:

0.05453

outside

1  -  222

 

 

Pi

278.803299

Theta

147.948254

Tajima's D

2.310081

CLR

0.138745

CSRT

0.924203789810509

Interpretation

Uncertain