Gene

KWMTBOMO12996  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000430

Annotation

_putative_cuticle_protein_[Bombyx_mori]

Location

Bomo_Chr22(-):6418727-6419729      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.756 PlasmaMembrane   Reliability : 1.26

CDS

ATGTTCTCTAAAATCGTAGCCCTGAGTGCTGTGCTGGCAGTGAGTGCTGCAGGTCTCTTGCCTGAGCCGCACTATTCTTCGGCTGCTGCTGTCTCCTCTCAGAGCATCGTCCGTCACGACCAACCACAGCTCCATGGCACCAAATATGTAGCCGCCGCTCCAGTAGCCATCCACGCCGCTCCTGTGGCATACCACGCAGCTCCTGTCGCCTACCACTCCGCCCCCGCTCACTACTCGTCTGCTGGCGCCGTCTCCTCCCAGACCATCCTGCGTCACGACCAGCCTCACGCAACCAACTACATCGCCGCCGCTGCTCCCGTCCACTACGCTAGCCCCGTCCACTACACCGCTCCTGTCGCTAAAGTGATCGCTCCCGCCCACAAAGTGCTTGTATCTGCTCACCATGAAGAGGAATACGCTCACCCCAAATACGACTTCGCCTACTCTGTTGCTGACGGACACAGCGGTGACAACAAGTCCCAGCACGAGTCCCGCGACGGTGACGCTGTGCACGGCGAGTACACTCTGCTTGAAGCTGACGGTTCAGTGCGCAAAGTTGAGTACACCGCTGACGACCACCACGGCTTTAACGCTGTCGTCAGTAACTCTGCCCCCGCTCATCATGTGGCTCATGCCGCCCACACACCGGTCCTTCTAGCTCATCATTGA

Protein

MFSKIVALSAVLAVSAAGLLPEPHYSSAAAVSSQSIVRHDQPQLHGTKYVAAAPVAIHAAPVAYHAAPVAYHSAPAHYSSAGAVSSQTILRHDQPHATNYIAAAAPVHYASPVHYTAPVAKVIAPAHKVLVSAHHEEEYAHPKYDFAYSVADGHSGDNKSQHESRDGDAVHGEYTLLEADGSVRKVEYTADDHHGFNAVVSNSAPAHHVAHAAHTPVLLAHH

Uniprot

C0H6U5   Q9BPR8   C0H6U6   Q9BPR9   C0H6U4   H9IT50   + More
C0H6U7   C0H6U3   I4DK02   A0A194PWP0   A0A194Q2Z8   A0A194PWT5   B2DBM5   A0A194QWT7   C0H6U1   Q9BPR7   C0H6U0   B2DBK0   C0H6T7   A0A194PYF6   A0A194PYF2   I4DJP1   A0A194QW55   A0A2A4IXI8   A0A2W1BV71   A0A2A4J4N1   A0A2W1C485   A0A212F8A9   A0A2W1C0G8   A0A2H1W3Y2   A0A212F1A8   Q9BPR4  

Pubmed

19280704    11483438    19121390    22651552    26354079    18712529    + More
28756777    22118469   

EMBL

BR000604    FAA00606.1    AB047478    BAB32476.1    BABH01013344    BR000605    + More
FAA00607.1    AB047477    BAB32475.1    BR000603    FAA00605.1    BABH01013343    BR000606    FAA00608.1    BR000602    FAA00604.1    AK401620    BAM18242.1    KQ459586    KPI97781.1    KPI97780.1    KPI97782.1    AB264709    BAG30784.1    KQ461073    KPJ09769.1    BR000600    FAA00602.1    AB047480    BAB32477.1    BR000599    FAA00601.1    AB264683    BAG30759.1    BR000596    FAA00598.1    KPI97784.1    KPI97779.1    AK401509    BAM18131.1    KPJ09768.1    NWSH01005898    PCG63860.1    KZ149892    PZC78982.1    NWSH01003396    PCG66373.1    PZC78983.1    AGBW02009770    OWR49961.1    PZC78987.1    ODYU01006144    SOQ47743.1    AGBW02010913    OWR47528.1    AB047483    BAB32480.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151   

PRIDE

C0H6U1    Q9BPR7    C0H6U0    C0H6T7    Q9BPR4   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6U5   Q9BPR8   C0H6U6   Q9BPR9   C0H6U4   H9IT50   + More
C0H6U7   C0H6U3   I4DK02   A0A194PWP0   A0A194Q2Z8   A0A194PWT5   B2DBM5   A0A194QWT7   C0H6U1   Q9BPR7   C0H6U0   B2DBK0   C0H6T7   A0A194PYF6   A0A194PYF2   I4DJP1   A0A194QW55   A0A2A4IXI8   A0A2W1BV71   A0A2A4J4N1   A0A2W1C485   A0A212F8A9   A0A2W1C0G8   A0A2H1W3Y2   A0A212F1A8   Q9BPR4  

KEGG

692395    no KO assigned | (RefSeq) CPR103, BmorCPR103, Wcp1b, bmwcp1b; cuticular protein RR-2 motif 103

GO

GO:0042302   GO:0016021   GO:0005761   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

SignalP

Position:   1 - 18,         Likelihood:  0.907237

 

 

Length:

222

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.753399999999999

Exp number, first 60 AAs:

0.678

Total prob of N-in:

0.05865

outside

1  -  222

 

 

Pi

204.287933

Theta

118.868368

Tajima's D

2.193013

CLR

0.001562

CSRT

0.909154542272886

Interpretation

Uncertain