SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12993
Annotation
cuticular_protein_RR-2_motif_120_precursor_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.605
 

Sequence

CDS
ATGTATATGTTGCAGGTGATTTGTGTGGTTGCGATTCTGTATACAGTGAGAGCTAAGCCACTGTATAGTCATGAATTTCCACACTCCTCTCAAAACTTCGTTCTTCATACCGAACACAAAGGACATCATGAGGAACATAAGCATCACCATGAGATCTATCATCCCATTCACGTTAAGCACGAAGAACACAAAGTAGAACATCATCATCATCATGAGGTTAAGGAACACAAAGTAGAAGAGCACAAAAAACCAGTGGAGCATTACAAACATCATGAACATAAGCACCATGAGCATCTAGAACATCATGATCTTCAACAGCACCATGAACATGATGAGCTTCAGCTGCTCGATGAACATCATGAGCATCAAGAGCTCCATGGATATCATGAGCATCAGCAACACCACGAGGACGATCAACATCATGAGCATCAACACCACCACGAAGACGATCAACACCATGAGCAAAAAGAGGAGCATAAAAAAGACAAAGAGCACACCGAGCACCATTCTCACCCAAAATACGAGTTCGACTACAAAGTAGAGGATCCTCATACTGGCGACTATAAAACCCACCACGAGGTCCGAGATGGAGATACGGTCCACGGCTTCTACACGTTACATGAAGCCGATGGGACTACTAGAATCGTGGAGTATTCTGCTGATAAAAAAGAAGGGTAA
Protein
MYMLQVICVVAILYTVRAKPLYSHEFPHSSQNFVLHTEHKGHHEEHKHHHEIYHPIHVKHEEHKVEHHHHHEVKEHKVEEHKKPVEHYKHHEHKHHEHLEHHDLQQHHEHDELQLLDEHHEHQELHGYHEHQQHHEDDQHHEHQHHHEDDQHHEQKEEHKKDKEHTEHHSHPKYEFDYKVEDPHTGDYKTHHEVRDGDTVHGFYTLHEADGTTRIVEYSADKKEG

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.964764
 
 
Length:
225
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.08783
Exp number, first 60 AAs:
0.08783
Total prob of N-in:
0.06888
outside
1  -  225
 
 

Population Genetic Test Statistics

Pi
213.047651
Theta
167.26047
Tajima's D
0.244185
CLR
0
CSRT
0.43822808859557
Interpretation
Uncertain
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