SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12991
Pre Gene Modal
BGIBMGA000259
Annotation
cuticular_protein_RR-2_motif_109_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.545 Mitochondrial   Reliability : 1.026 Nuclear   Reliability : 1.415
 

Sequence

CDS
ATGTATTCCAAGGCTCATCCTAAATACGCCTTTGAGTACAAAGTAGAGGATCCTCACACCGGCGACAACAAGTACCAGCACGAGACCCGTGACGGTGACGTCGTGAAGGGCGTGTACAGTCTGCACGAGGCCGATGGTACCATCAGGACTGTTGAGTACAGCGCCGATAAACACAGCGGATTCAACGCAGTTGTGAGACGCGAGGGTCATGCTCGCCATGTTGTACCTGAACATCATCATCATCACTAA
Protein
MYSKAHPKYAFEYKVEDPHTGDNKYQHETRDGDVVKGVYSLHEADGTIRTVEYSADKHSGFNAVVRREGHARHVVPEHHHHH

Summary

EMBL
BABH01013348    BR000610    FAA00612.1    BR000612    FAA00614.1    RSAL01000021    + More
RVE52446.1    BR000608    FAA00610.1    RVE52443.1    RVE52447.1    ODYU01007211    SOQ49792.1    ODYU01002284    SOQ39565.1    ODYU01003691    SOQ42770.1    KZ149892    PZC78971.1    SOQ39566.1    PZC78970.1    SOQ39564.1    ODYU01011607    SOQ57450.1    ODYU01007979    SOQ51206.1    ODYU01009022    SOQ53117.1    BR000625    FAA00627.1    AB047485    AB047486    BAB32482.1    BAB32483.1    ODYU01000605    SOQ35681.1    SOQ42769.1    PZC78962.1    KK852584    KDR20834.1    AGBW02008093    OWR54166.1    ODYU01003654    SOQ42695.1    SOQ49793.1    BABH01013354    BR000623    FAA00625.1    AB047487    BAB32484.1    PZC78964.1    KQ461073    KPJ09774.1    BR000624    FAA00626.1    AK401054    BAM17676.1    ODYU01000177    SOQ34521.1    PZC78961.1    KQ459586    KPI97774.1    KPJ09775.1    KPI97771.1    BABH01013355    KPJ09777.1    SOQ42696.1    PZC78975.1    PZC78960.1    AK401841    BAM18463.1    ODYU01004033    SOQ43499.1    ODYU01011838    SOQ57809.1    ODYU01003855    SOQ43136.1    SOQ43137.1    ODYU01010460    SOQ55587.1    KQ971342    EFA03719.1    PYGN01001062    PSN37960.1    GEZM01068802    JAV66764.1    EFA03718.1    JN082718    AER27815.1    RVE52458.1    NWSH01002544    PCG68014.1    ODYU01003629    SOQ42622.1    EFA03720.1    JTDY01009813    KOB62611.1    PSN37969.1    KK854044    PTY10186.1    KPI97775.1    SOQ42621.1    SOQ51205.1    KPI97773.1    KPJ09776.1    BABH01013358    BR000627    FAA00629.1    EFA03714.1    AXCN02000565    AAAB01008807    EDO64780.1    APCN01003642    GBGD01003554    JAC85335.1    AXCM01020208    KPI97769.1    ACPB03012170    GAHY01002361    JAA75149.1    GAHY01000373    JAA77137.1    ACPB03012169    ADMH02000233    ETN67291.1    AK401839    BAM18461.1    GECZ01021254    JAS48515.1    GAMD01001404    JAB00187.1    ACPB03022691    GAHY01002380    JAA75130.1    APGK01018855    KB740085    ENN81507.1    KB631844    ERL86680.1    GEBQ01014146    JAT25831.1    ACPB03026392    BABH01013356    BABH01013357    DS235028    EEB10690.1    KPJ09786.1    EFA03712.1    EFA04643.2    MG601606    AYA49931.1   
Pfam
PF00379   Chitin_bind_4
Interpro
IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

Ontologies

Topology

Length:
82
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.51832
inside
1  -  82
 
 

Population Genetic Test Statistics

Pi
401.941737
Theta
208.845854
Tajima's D
2.910771
CLR
0.123394
CSRT
0.975051247437628
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号