Gene

KWMTBOMO12988

Pre Gene Modal

BGIBMGA000258

Annotation

PREDICTED:_cuticular_protein_RR-2_motif_113_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr22(+):6359700-6360279      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.278

CDS

ATGGTATTTAAGGTAGTATTGTTCGTCGCATTGGTCGGTGTTGTATCCGCTGAGCACGCGTTCTCCTCCCAACACATCCACAAGTACGACGGTCACCACGAGCCCGTACATCACGGACACCATTATGATTACTATACTCACCCTAAATTCGACTTCGAGTACAAAGTGAGCGACCCTCACACCGGCGACCACAAGAGTCAGCACGAGTCCCGCGACGGTGACGTCGTCAAGGGATATTACTCGCTGCACCAACCTGACGGCTCCATTAGACATGTCGACTATCACGGCGATCACCATTCTGGGTAA

Protein

MVFKVVLFVALVGVVSAEHAFSSQHIHKYDGHHEPVHHGHHYDYYTHPKFDFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSG

Uniprot

C0H6V5   C0H6V6   C0H6V8   C0H6W0   C0H6V4   C0H6V7   + More
C0H6W3   C0H6U8   C0H6W1   C0H6V0   A0A2A4IV03   A0A2H1WGD3   C0H6V2   H9ISM7   A0A2W1C0C0   A0A2W1C1X5   G8FVQ2   A0A2H1V127   A0A194PWN4   A0A194PXM8   A0A194QW60   A0A2H1VSI7   A0A2H1VQS4   A0A194R1N8   A0A2H1V4C4   A0A194PXM4   A0A2H1VPL7   A0A2H1VH24   A0A2H1WAB8   A0A2H1VFK7   A0A2W1BV53   A0A2W1BZF1   A0A2H1WE29   A0A194R1P3   A0A2W1C1G9   A0A2H1VPH0   A0A194PYF2   A0A2H1VP60   A0A2H1WRF0   A0A2H1WDQ1   A0A2H1VPL0   A0A194PWT0   A0A2H1W9R4   A0A194PWS5   A0A2H1VPE0   A0A2W1C1W6   A0A2H1WRJ6  

Pubmed

19121390    19280704    28756777    26354079   

EMBL

BABH01013349    BR000614    FAA00616.1    BABH01013350    BR000615    FAA00617.1    + More
BABH01013351    BR000617    FAA00619.1    BABH01013354    BR000619    FAA00621.1    BR000613    FAA00615.1    BR000616    BR000618    FAA00618.1    FAA00620.1    BR000622    FAA00624.1    BABH01013347    BR000607    FAA00609.1    BR000620    FAA00622.1    BR000609    FAA00611.1    NWSH01006625    PCG63326.1    ODYU01008423    SOQ52006.1    BR000611    FAA00613.1    KZ149892    PZC78967.1    PZC78976.1    JN082722    AER27819.1    ODYU01000177    SOQ34521.1    KQ459586    KPI97776.1    KPI97778.1    KQ461073    KPJ09773.1    ODYU01003995    SOQ43422.1    ODYU01003855    SOQ43136.1    KPJ09771.1    ODYU01000605    SOQ35681.1    KPI97773.1    ODYU01003691    SOQ42770.1    ODYU01002284    SOQ39564.1    ODYU01007211    SOQ49792.1    SOQ39566.1    PZC78962.1    PZC78964.1    ODYU01007979    SOQ51206.1    KPJ09776.1    PZC78970.1    ODYU01003654    SOQ42696.1    KPI97779.1    ODYU01003629    SOQ42621.1    ODYU01010460    SOQ55587.1    SOQ51205.1    SOQ42769.1    KPI97777.1    SOQ49793.1    KPI97772.1    SOQ42695.1    PZC78966.1    ODYU01010466    SOQ55596.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240   

PRIDE

C0H6W0    C0H6V7    C0H6U8    C0H6W1    C0H6V0    C0H6V2    + More
H9ISM7   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6V5   C0H6V6   C0H6V8   C0H6W0   C0H6V4   C0H6V7   + More
C0H6W3   C0H6U8   C0H6W1   C0H6V0   A0A2A4IV03   A0A2H1WGD3   C0H6V2   H9ISM7   A0A2W1C0C0   A0A2W1C1X5   G8FVQ2   A0A2H1V127   A0A194PWN4   A0A194PXM8   A0A194QW60   A0A2H1VSI7   A0A2H1VQS4   A0A194R1N8   A0A2H1V4C4   A0A194PXM4   A0A2H1VPL7   A0A2H1VH24   A0A2H1WAB8   A0A2H1VFK7   A0A2W1BV53   A0A2W1BZF1   A0A2H1WE29   A0A194R1P3   A0A2W1C1G9   A0A2H1VPH0   A0A194PYF2   A0A2H1VP60   A0A2H1WRF0   A0A2H1WDQ1   A0A2H1VPL0   A0A194PWT0   A0A2H1W9R4   A0A194PWS5   A0A2H1VPE0   A0A2W1C1W6   A0A2H1WRJ6  

KEGG

100379365    no KO assigned | (RefSeq) CPR113, BmorCPR113; cuticular protein RR-2 motif 113

GO

GO:0042302   GO:0016021   GO:0005761   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

SignalP

Position:   1 - 17,         Likelihood:  0.996797

 

 

Length:

101

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.4897

Exp number, first 60 AAs:

3.4897

Total prob of N-in:

0.20977

outside

1  -  101

 

 

Pi

279.518573

Theta

179.392658

Tajima's D

1.765869

CLR

0

CSRT

0.838658067096645

Interpretation

Uncertain