Gene

KWMTBOMO12987

Pre Gene Modal

BGIBMGA000257

Annotation

cuticular_protein_RR-2_motif_114_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):6349650-6351594      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.102

CDS

ATGGTTTCTAAGATTGTCTTGTTCGTCGCTTTGGTCGGTGCTGTATCCGCTGAGCACGCCTTCTCCTCCCAACACATCCACAAATATGACGGTCACCATGAACCCGTACACCACGGACACCATCATGATTACTACACTCACCCTAAATTCGACTTCGAGTACAAAGTGAGCGACCCTCACACCGGCGACCACAAGAGTCAGCACGAGTCCCGCGACGGTGACGTCGTCAAGGGGTATTACTCGCTGCACCAACCTGACGGTTCCATCAGACACGTCGACTATCACGGCGATCATCACTCTGGGTTCCATGCTGACGTCAAATACAGCACTCACCATATTGTTCCCCATCATCATCATTACTAA

Protein

MVSKIVLFVALVGAVSAEHAFSSQHIHKYDGHHEPVHHGHHHDYYTHPKFDFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVPHHHHY

Uniprot

C0H6V6   C0H6V5   C0H6V4   C0H6V7   A0A2A4IV03   C0H6W0   + More
G8FVQ2   C0H6V8   A0A2W1C0C0   A0A194PWN4   A0A194QW60   A0A2W1C1X5   A0A2H1WGD3   C0H6U8   C0H6W1   C0H6W3   C0H6V0   A0A2H1VP60   H9ISM7   A0A194R1N8   C0H6V2   A0A194PXM8   A0A2H1V127   A0A194QWB8   A0A2H1VQS4   A0A2W1C1W6  

Pubmed

19121390    19280704    28756777    26354079   

EMBL

BABH01013350    BR000615    FAA00617.1    BABH01013349    BR000614    FAA00616.1    + More
BR000613    FAA00615.1    BABH01013351    BABH01013354    BR000616    BR000618    FAA00618.1    FAA00620.1    NWSH01006625    PCG63326.1    BR000619    FAA00621.1    JN082722    AER27819.1    BR000617    FAA00619.1    KZ149892    PZC78967.1    KQ459586    KPI97776.1    KQ461073    KPJ09773.1    PZC78976.1    ODYU01008423    SOQ52006.1    BABH01013347    BR000607    FAA00609.1    BR000620    FAA00622.1    BR000622    FAA00624.1    BR000609    FAA00611.1    ODYU01003629    SOQ42621.1    KPJ09771.1    BR000611    FAA00613.1    KPI97778.1    ODYU01000177    SOQ34521.1    KPJ09772.1    ODYU01003855    SOQ43136.1    PZC78966.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240   

PRIDE

C0H6V7    C0H6W0    C0H6U8    C0H6W1    C0H6V0    H9ISM7    + More
C0H6V2   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6V6   C0H6V5   C0H6V4   C0H6V7   A0A2A4IV03   C0H6W0   + More
G8FVQ2   C0H6V8   A0A2W1C0C0   A0A194PWN4   A0A194QW60   A0A2W1C1X5   A0A2H1WGD3   C0H6U8   C0H6W1   C0H6W3   C0H6V0   A0A2H1VP60   H9ISM7   A0A194R1N8   C0H6V2   A0A194PXM8   A0A2H1V127   A0A194QWB8   A0A2H1VQS4   A0A2W1C1W6  

KEGG

100379364    no KO assigned | (RefSeq) CPR114, BmorCPR114; cuticular protein RR-2 motif 114

GO

GO:0042302   GO:0016021   GO:0005761   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

SignalP

Position:   1 - 17,         Likelihood:  0.992361

 

 

Length:

120

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.97621

Exp number, first 60 AAs:

1.97621

Total prob of N-in:

0.16040

outside

1  -  120

 

 

Pi

164.340905

Theta

140.522598

Tajima's D

0.67095

CLR

12.362419

CSRT

0.565371731413429

Interpretation

Uncertain