Gene

KWMTBOMO12985

Pre Gene Modal

BGIBMGA000253

Annotation

cuticular_protein_RR-2_motif_121_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):6313410-6315215      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.225

CDS

ATGTTCTCAAAGATTGTATGTCTACTTGGTGTTGTTGCTGTTGCAACTGCGCAGTATGGTCATGACCAAAGTCACGGCCACGCCTTCTCGTCGCAACACATCTCGCGGCACGATGGCCCCGCACAAGTTGTGCATGTCAAGGGTCACGGGCACGATGGTCATGGTCACGAAGACCACATCGACTACTATGCCCACCCTAAATACGAGTTCGAGTACAAAGTGAGCGACCCTCACACCGGCGACCACAAGAGTCAGCACGAGTCCCGCGACGGTGACGTCGTCAAGGGATATTACTCGCTGCATCAACCTGACGGTTCCATCAGGCATGTCGACTATCACGGCGACAAGCACTCAGGATTCCATGCCACCGTGAAGCACAGCACCCACCACATTGCCCCTGAAAAGCACCATCAGTAA

Protein

MFSKIVCLLGVVAVATAQYGHDQSHGHAFSSQHISRHDGPAQVVHVKGHGHDGHGHEDHIDYYAHPKYEFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDKHSGFHATVKHSTHHIAPEKHHQ

Uniprot

C0H6W3   A0A194PXM4   A0A2H1VP60   A0A194R1P3   A0A194R1N8   A0A2W1C0C0   + More
A0A2A4IV03   G8FVQ2   A0A194PWN4   C0H6W0   A0A194QW60   C0H6V6   C0H6V5   C0H6V7   C0H6V4   A0A2H1WGD3   A0A194PXM8   A0A2H1WRJ6   A0A2W1BVG0   C0H6V8   C0H6U8   A0A2H1WDQ1   A0A3S2PIL6   A0A2H1VQR4   A0A2W1C1X5   C0H6W1   C0H6V0   A0A3S2LRS0   A0A2H1VPL7   C0H6V2   A0A194PWS5   A0A2H1V127   Q9BH30   H9ISM7   A0A2W1C1W6   A0A2W1BXC1   A0A194QWB8   A0A2H1VQS4   A0A212F8A2   A0A2W1BZW6   I4DMR3   D6WJ08   A0A194PXP1   A0A194QWA3   U4U2J7   A0A3S2NJA9   I4DMH3   A0A2W1BZU2   A0A1W4WQB0   C0H6S9   C0H6S8   A0A194PWU5   A0A194PWQ0   A0A2H1VD38   A0A212F899   A0A194PWT0   A0A212F897   A0A194PYF2   I4DJZ8   N6TM36   A0A182N9I2  

Pubmed

19121390    19280704    26354079    28756777    11483438    22118469    + More
22651552    18362917    19820115    23537049   

EMBL

BABH01013354    BR000622    FAA00624.1    KQ459586    KPI97773.1    ODYU01003629    + More
SOQ42621.1    KQ461073    KPJ09776.1    KPJ09771.1    KZ149892    PZC78967.1    NWSH01006625    PCG63326.1    JN082722    AER27819.1    KPI97776.1    BR000619    FAA00621.1    KPJ09773.1    BABH01013350    BR000615    FAA00617.1    BABH01013349    BR000614    FAA00616.1    BABH01013351    BR000616    BR000618    FAA00618.1    FAA00620.1    BR000613    FAA00615.1    ODYU01008423    SOQ52006.1    KPI97778.1    ODYU01010466    SOQ55596.1    PZC78969.1    BR000617    FAA00619.1    BABH01013347    BR000607    FAA00609.1    ODYU01007979    SOQ51205.1    RSAL01000021    RVE52447.1    ODYU01003855    SOQ43137.1    PZC78976.1    BR000620    FAA00622.1    BR000609    FAA00611.1    RVE52446.1    ODYU01003691    SOQ42770.1    BR000611    FAA00613.1    KPI97772.1    ODYU01000177    SOQ34521.1    AB047485    AB047486    BAB32482.1    BAB32483.1    PZC78966.1    PZC78971.1    KPJ09772.1    SOQ43136.1    AGBW02009770    OWR49967.1    PZC78995.1    AK402581    BAM19203.1    KQ971342    EFA03712.1    KPI97793.1    KPJ09757.1    KB631296    ERL84225.1    RVE52429.1    AK402491    BAM19113.1    PZC78965.1    BABH01013339    BR000588    FAA00590.1    BR000587    FAA00589.1    KPI97792.1    KPI97791.1    ODYU01001904    SOQ38763.1    OWR49965.1    KPI97777.1    OWR49966.1    KPI97779.1    AK401616    BAM18238.1    KPI97790.1    APGK01018857    KB740085    KB631844    ENN81509.1    ERL84223.1    ERL86682.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000283053    UP000007151    + More
UP000007266    UP000030742    UP000192223    UP000019118    UP000075884   

PRIDE

C0H6W0    C0H6V7    C0H6U8    C0H6W1    C0H6V0    C0H6V2    + More
Q9BH30    H9ISM7    C0H6S9    C0H6S8   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6W3   A0A194PXM4   A0A2H1VP60   A0A194R1P3   A0A194R1N8   A0A2W1C0C0   + More
A0A2A4IV03   G8FVQ2   A0A194PWN4   C0H6W0   A0A194QW60   C0H6V6   C0H6V5   C0H6V7   C0H6V4   A0A2H1WGD3   A0A194PXM8   A0A2H1WRJ6   A0A2W1BVG0   C0H6V8   C0H6U8   A0A2H1WDQ1   A0A3S2PIL6   A0A2H1VQR4   A0A2W1C1X5   C0H6W1   C0H6V0   A0A3S2LRS0   A0A2H1VPL7   C0H6V2   A0A194PWS5   A0A2H1V127   Q9BH30   H9ISM7   A0A2W1C1W6   A0A2W1BXC1   A0A194QWB8   A0A2H1VQS4   A0A212F8A2   A0A2W1BZW6   I4DMR3   D6WJ08   A0A194PXP1   A0A194QWA3   U4U2J7   A0A3S2NJA9   I4DMH3   A0A2W1BZU2   A0A1W4WQB0   C0H6S9   C0H6S8   A0A194PWU5   A0A194PWQ0   A0A2H1VD38   A0A212F899   A0A194PWT0   A0A212F897   A0A194PYF2   I4DJZ8   N6TM36   A0A182N9I2  

KEGG

100379357    no KO assigned | (RefSeq) CPR121, BmorCPR121; cuticular protein RR-2 motif 121

GO

GO:0042302   GO:0016021   GO:0031012   GO:0005761   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

SignalP

Position:   1 - 17,         Likelihood:  0.986560

 

 

Length:

138

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.27628

Exp number, first 60 AAs:

0.27628

Total prob of N-in:

0.06089

outside

1  -  138

 

 

Pi

21.889568

Theta

25.690124

Tajima's D

-0.502327

CLR

2.035052

CSRT

0.242937853107345

Interpretation

Uncertain