Silkworm Genome Informatics Database

Gene

KWMTBOMO12982

Pre Gene Modal

BGIBMGA000250

Annotation

cuticular_protein_RR-2_motif_126_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):6265980-6271817 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.368

CDS

ATGCGTGCCTTCCAAGTCGTGATCTTCGTCGCGGTGTGCGGTGCAGCCAGCGCCGGGTATATCGCTCCCGGGTACAGTGGCTATTCCGGGTACAGCGGAGGACTGGGTGGCTATAACGCTGGCTACAGCGGTGGCTACGGAGGATACGATGGCGGAAATCACGGAGACTATTACGCCTACCCCAAGTATGCCTTTGATTACTCAGTGAATGACCCTCATACTGGCGATCACAAAACACAATGGGAGAGCCGGGATGGTGACGTTGTAAAAGGTGCTTATTCTCTTGCTGAGCCTGATGGCACTACTCGCATTGTTGAATATACTGCTGATAAACACAATGGCTTCAATGCAGTCGTAAAACGCATTGGTCAAGCTCACCATCCCCAGGTCTACGGAGGACACTACGACGGAGCTGGTTACTACGGTTATCACTAG

Protein

MRAFQVVIFVAVCGAASAGYIAPGYSGYSGYSGGLGGYNAGYSGGYGGYDGGNHGDYYAYPKYAFDYSVNDPHTGDHKTQWESRDGDVVKGAYSLAEPDGTTRIVEYTADKHNGFNAVVKRIGQAHHPQVYGGHYDGAGYYGYH

Uniprot

C0H6W8 A0A3S2NYR7 A0A2H1VNM4

Pubmed

19121390 19280704

EMBL

BABH01013358 BR000627 FAA00629.1 RSAL01000021 RVE52458.1 ODYU01003536 + More
SOQ42439.1

Proteomes

UP000005204 UP000283053

PRIDE

C0H6W8

Pfam

PF00379 Chitin_bind_4

Interpro

IPR000618 Insect_cuticle + More
IPR031311 CHIT_BIND_RR_consensus

ProteinModelPortal

C0H6W8 A0A3S2NYR7 A0A2H1VNM4

KEGG

100379353 no KO assigned | (RefSeq) CPR126, BmorCPR126; cuticular protein RR-2 motif 126

GO

GO:0042302 GO:0005761 GO:0006412 GO:0043565 GO:0007155 GO:0005515 GO:0008237 GO:0008152 GO:0016491 GO:0015930

SignalP

Position: 1 - 18, Likelihood: 0.999116

Length:

144

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.04147

Exp number, first 60 AAs:

21.04064

Total prob of N-in:

0.92031

POSSIBLE N-term signal

sequence

inside

1 - 6

TMhelix

7 - 29

outside

30 - 144

Pi

307.745627

Theta

173.04122

Tajima's D

2.143481

CLR

0.011127

CSRT

0.901504924753762

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics