Gene

KWMTBOMO12977

Pre Gene Modal

BGIBMGA000246

Annotation

cuticular_protein_RR-2_motif_129_precursor_[Bombyx_mori]

Location

Bomo_Chr22(+):6082956-6084957      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.507 Extracellular   Reliability : 1.179

CDS

ATGAGCTATCCAAAGTACGCGTTCAACTACGGTGTCAAGGACCTTCACACCGGCGACATCAAGTCTCAGCAGGAGCAAAGGGACGGTGATGTCGTCAAAGGCAGTTATTCACTAGTGGAACCGGACGGCACGACCCGCACAGTGCACTATACAGCCGATGACCACACCGGATTCAACGCTGTTGTACAGAAATCGGGACATGCTGCACATCCGGATACAACTTTGAATTAA

Protein

MSYPKYAFNYGVKDLHTGDIKSQQEQRDGDVVKGSYSLVEPDGTTRTVHYTADDHTGFNAVVQKSGHAAHPDTTLN

Uniprot

C0H6X1   I4DKM1   A0A194R1Q6   A0A2H1W1A5   A0A3S2TQM1   A0A194Q7N0   + More
A0A212EP54   T1H7Q7   R4FQP8   D6WJ08   D6WJ09   A0A023F8S5   A0A171ALS0   A0A1W4WEB3   A0A2R7WI96   A0A3Q8HG33   A0A1B0D4L8   A0A2S1ZSA5   A0A1B6M2A3   D6WJ10   Q16PW8   A0A2S1ZSB8   A0A182RD56   B0WMM5   A0A182HC39   A0A2Z4N546   A0A1D1XC97   T1HZQ8   A0A1I8M8L8   A0A1B6G4J8   A0A1W4WEC9   A0A1B6HE43   A0A1I8M5N6   A0A1I8PG42   A0A2P8ZAB1   A0A171ALI9   A0A2J7RMB6   A0A1B6KI50   A0A1I8MMJ1   A0A182PCE2   A0A182MCR9   A0A182X8R8   Q7PP95   A0A1A9Z8W9   A0A1A9YA04   A0A067RII3   A0A224XZ20   A0A0P8XUD1   A0A182J4X6   A0A2R7WPT3   T1GFH9   A0A336M0P1   A0A1B0G3U6   A0A1A9VMV5   R4G829   A0A1Y1KZI1   T1DJB2   A0A182WCF1   A0A182I109   A0A1J1IJX8   A0A182LLC8   A0A182F9V6   A0A2J7RMD1   T1I315   C4WXI7   A0A182UPL0   J9JRZ2   X1XE35   U4U2J7   D6WIZ8   A0A2R7W1Y6   A0A2H8TXS9   A0A2P8Y125   W8B645   Q5U126   A0A1A9WCY1   A0A0J9RR64   A0A1W4USI5   A0A0Q5UHW2   N6TM36   A0A0A9X984   A0A182QRQ0   A0A2R7VW49   A0A0R1DVE2   A0A1B6CKT0   A0A0K8VAJ2   A0A0Q9X2J1   A0A0M4EKR0   A0A1D1YWR9   B5DQC3   B4H619   A0A0A1XAS7   B4LDJ1   A0A3B0KJK2   A0A1B6CS36   A0A182U7N5   A0A232F5H6   A0A2P8Y151   A0A2J7RMC4   K7JD36  

Pubmed

19121390    19280704    22651552    26354079    22118469    18362917    + More
19820115    25474469    29712872    17510324    26483478    25315136    29403074    12364791    14747013    17210077    24845553    17994087    28004739    20966253    23537049    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25401762    17550304    15632085    25830018    28648823    20075255   

EMBL

BABH01013374    BR000630    FAA00632.1    AK401839    BAM18461.1    KQ461073    + More
KPJ09786.1    ODYU01005723    SOQ46859.1    RSAL01000021    RVE52465.1    KQ459324    KPJ01528.1    AGBW02013536    OWR43259.1    ACPB03016592    GAHY01000284    JAA77226.1    KQ971342    EFA03712.1    EFA04643.2    GBBI01000912    JAC17800.1    GEMB01000904    JAS02237.1    KK854788    PTY18730.1    MG601604    AYA49929.1    AJVK01024669    MF942822    AWK28345.1    GEBQ01009949    JAT30028.1    EFA03711.2    CH477770    EAT36402.1    MF942836    AWK28359.1    DS233177    DS231999    EDS28494.1    EDS31107.1    JXUM01032810    KQ560967    KXJ80185.1    MF611866    AWX65379.1    GDJX01027881    JAT40055.1    ACPB03021504    GECZ01012411    JAS57358.1    GECU01034746    JAS72960.1    PYGN01000127    PSN53438.1    GEMB01000911    JAS02230.1    NEVH01002564    PNF41984.1    GEBQ01028858    JAT11119.1    AXCM01014671    AAAB01008960    EAA10827.5    KK852456    KDR23626.1    GFTR01003135    JAW13291.1    CH902618    KPU78328.1    KK855241    PTY21618.1    CAQQ02188773    UFQT01000264    SSX22569.1    CCAG010020663    GAHY01001692    JAA75818.1    GEZM01068802    JAV66764.1    GAMD01001571    JAB00020.1    APCN01000013    CVRI01000054    CRL00058.1    PNF41982.1    ACPB03001315    AK342661    BAH72607.1    ABLF02023867    ABLF02023866    KB631296    ERL84225.1    EFA03721.2    KK854198    PTY12960.1    GFXV01007300    MBW19105.1    PYGN01001062    PSN37946.1    GAMC01009935    JAB96620.1    BT016066    AE014296    KX531460    AAV36951.1    ABW08493.1    ANY27270.1    CM002912    KMY98351.1    CH954178    KQS43462.1    APGK01018857    KB740085    KB631844    ENN81509.1    ERL84223.1    ERL86682.1    GBHO01029975    GBHO01029974    JAG13629.1    JAG13630.1    AXCN02000449    KK854043    PTY10155.1    CM000159    KRK01021.1    GEDC01023300    JAS13998.1    GDHF01016749    JAI35565.1    CH964095    KRF98987.1    CP012525    ALC43885.1    GDJX01008851    JAT59085.1    CH379069    EDY73867.1    CH479212    EDW33236.1    GBXI01017550    GBXI01005898    JAC96741.1    JAD08394.1    CH940647    EDW68929.1    OUUW01000009    SPP85301.1    GEDC01021163    JAS16135.1    NNAY01000885    OXU26064.1    PSN37969.1    PNF41981.1   

Proteomes

UP000005204    UP000053240    UP000283053    UP000053268    UP000007151    UP000015103    + More
UP000007266    UP000192223    UP000092462    UP000008820    UP000075900    UP000002320    UP000069940    UP000249989    UP000095301    UP000095300    UP000245037    UP000235965    UP000075885    UP000075883    UP000076407    UP000007062    UP000092445    UP000092443    UP000027135    UP000007801    UP000075880    UP000015102    UP000092444    UP000078200    UP000075920    UP000075840    UP000183832    UP000075882    UP000069272    UP000075903    UP000007819    UP000030742    UP000000803    UP000091820    UP000192221    UP000008711    UP000019118    UP000075886    UP000002282    UP000007798    UP000092553    UP000001819    UP000008744    UP000008792    UP000268350    UP000075902    UP000215335    UP000002358   

PRIDE

C0H6X1    Q5U126   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6X1   I4DKM1   A0A194R1Q6   A0A2H1W1A5   A0A3S2TQM1   A0A194Q7N0   + More
A0A212EP54   T1H7Q7   R4FQP8   D6WJ08   D6WJ09   A0A023F8S5   A0A171ALS0   A0A1W4WEB3   A0A2R7WI96   A0A3Q8HG33   A0A1B0D4L8   A0A2S1ZSA5   A0A1B6M2A3   D6WJ10   Q16PW8   A0A2S1ZSB8   A0A182RD56   B0WMM5   A0A182HC39   A0A2Z4N546   A0A1D1XC97   T1HZQ8   A0A1I8M8L8   A0A1B6G4J8   A0A1W4WEC9   A0A1B6HE43   A0A1I8M5N6   A0A1I8PG42   A0A2P8ZAB1   A0A171ALI9   A0A2J7RMB6   A0A1B6KI50   A0A1I8MMJ1   A0A182PCE2   A0A182MCR9   A0A182X8R8   Q7PP95   A0A1A9Z8W9   A0A1A9YA04   A0A067RII3   A0A224XZ20   A0A0P8XUD1   A0A182J4X6   A0A2R7WPT3   T1GFH9   A0A336M0P1   A0A1B0G3U6   A0A1A9VMV5   R4G829   A0A1Y1KZI1   T1DJB2   A0A182WCF1   A0A182I109   A0A1J1IJX8   A0A182LLC8   A0A182F9V6   A0A2J7RMD1   T1I315   C4WXI7   A0A182UPL0   J9JRZ2   X1XE35   U4U2J7   D6WIZ8   A0A2R7W1Y6   A0A2H8TXS9   A0A2P8Y125   W8B645   Q5U126   A0A1A9WCY1   A0A0J9RR64   A0A1W4USI5   A0A0Q5UHW2   N6TM36   A0A0A9X984   A0A182QRQ0   A0A2R7VW49   A0A0R1DVE2   A0A1B6CKT0   A0A0K8VAJ2   A0A0Q9X2J1   A0A0M4EKR0   A0A1D1YWR9   B5DQC3   B4H619   A0A0A1XAS7   B4LDJ1   A0A3B0KJK2   A0A1B6CS36   A0A182U7N5   A0A232F5H6   A0A2P8Y151   A0A2J7RMC4   K7JD36  

KEGG

100379350    no KO assigned | (RefSeq) CPR129, BmorCPR129; cuticular protein RR-2 motif 129

GO

GO:0042302   GO:0016021   GO:0031012   GO:0040003   GO:0005214   GO:0008010   GO:0005761   GO:0006412   GO:0043565   GO:0007155   GO:0005515   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

Length:

76

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.37768

outside

1  -  76

 

 

Pi

268.764916

Theta

156.352481

Tajima's D

2.938227

CLR

0.333988

CSRT

0.977401129943503

Interpretation

Uncertain