SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12965  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000447
Annotation
N-ethylmaleimide_sensitive_fusion_protein_[Danaus_plexippus]
Full name
Vesicle-fusing ATPase 2      
Alternative Name
N-ethylmaleimide-sensitive fusion protein 2
Vesicular-fusion protein NSF2
dNsf-2
Location in the cell
Nuclear   Reliability : 2.427
 

Sequence

CDS
ATGTCTTCAATGCGAATGAAAGCAGCCAAATGTCCATCTGATGAGCTTGCCATCACCAACTGTGCTCTAATACATCAAGATGACTTTCCAAGTGACATCAAGCATATTGAAGTATCTACAGGACCATCTCAACACTTTGTGTTCAGCATTCGGTTCTACAATGGAGTTGACCGTGGCACTGTTGGATTTTCTGCCCCTCAGCGAAAATGGGCTACCCTCTCTATCGGTCAAACCATTGACGTGAAGCCTTTCAAACCCTCTAGTGCTGAATGCCTTTGCAGCGTAACGTTGGAAGCCGATTTCATGATGAAGAAAACAACATCAACGGATCCATATGATTCGGAACAAATGGCCAGAGATTTCCTTATTCAGTTCGCCAATCAAGTTTTTACTGTCGGACAACAGCTGGCTTTCTTGTTCCAAGAGAAGAAAGTCTTGTCGTTGATCGTAAAAAATTTGGAAGCCGTCGATGTGCAAGCTTTAGCGGCCGGAGCCAACGCCGTGCCCCGCCGGGTGCGGATGGGCCGGCTGCTGCCCGACGCCTCGGTGCAGTTCGACAAGGCGGAGAATTCGTCTCTGAACCTAATCGGGAAGGCTAAAGGAAAGCAACCGCGACAGTCGATCATCAATCCGGACTGGGACTTCGGCAAGATGGGCATCGGCGGTCTCGACAACGAGTTCAACGCGATCTTCCGTCGCGCGTTTGCTTCCCGAGTGTTCCCCCCGGAGGTCGTCGAGCAACTAGGCTGCAAGCACGTGAAGGGAATCTTGCTCTACGGTCCGCCCGGCACCGGCAAGACTTTGATGGCCCGACAGATCGGGAAGATGCTAAACGCCCGCGAACCGAAGATCGTCAACGGCCCACAGATATTGGACAAATACGTTGGCGAGAGCGAGGCCAACATTCGACGTTTATTTGCCGACGCCGAGGAAGAAGAGAAGCGATGCGGAGCGAACAGCGGGCTTCACATCATAATATTCGATGAAATCGACGCGATCTGCAAGGCCAGGGGCTCCGTCGGCGGCAACACCGGCGTCCACGACACCGTCGTCAATCAGCTCCTCTCCAAGATCGACGGTGTGGATCAACTGAACAATATCCTGGTGATCGGTATGACGAACCGGCGCGACATGATCGACGAGGCCCTGCTCCGACCCGGCCGTCTCGAGGTGCAGATGGAGATCGGGCTTCCCGACGAGAAGGGGCGCGTCCAGATATTGAACATTCACACCAAGCGCATGCGCGAGTATAAGAAAATCGCCGAAGACGTCGACTCTATGGAGTTGGCAACGTTAACGAAGAACTTCTCTGGGGCCGAACTGGAGGGTTTGGTCCGAGCTGCCCAGTCGACCGCCATGAACAGACTCATCAAGGCGTCGAGCAAAGTCGAAGTCGATCCCGAAGCCATGGAGAAACTGATGGTCGAACGTACCGACTTCTTGCACGCCTTGGAGAATGATATCAAACCGGCCTTCGGTACATCCGCCGAAGCGCTCGAGCACTTCTTGGCTCGCGGCATCGTCAACTGGGGCTCTCCTGTTTCTTCTATATTTGAAGATGGACAGTTGTATATTCAACAGGCGCGGGCGACCGAAGCCAGCGGTCTGGTGTCGGTGCTGTTGGAGGGCCCCCCGAACAGCGGCAAGACGGCCCTCGCCGCGCAACTGGCCAAGCTGTCGGACTTCCCGTTCGTGAAGGTTTGCTCGCCCGAAGACATGGTCGGCTTCACGGAGACAGCTAAATGCTTGCAGATTAGGAAGTATTTCGACGACGCGTACCGCTCGAGCCTGTCGTGCATCCTGGTCGACAACATCGAGCGGCTGCTGGACTACGGACCGATCGGGCCGCGCTACTCCAACCTGACGCTGCAGGCGCTGCTCGTTCTCCTGAAGAAGCAGCCGCCCAAGGGACGAAAACTGCTCATCTTGTGCACGAGCAGCCGAAGGCAAGTGTTGGAAGACATGGAAATCCTGTCTGCGTTCACCGGAGTGCTCCACGTGCCGAACCTGTCGCAGCCCGAGCACCTGCTGTCGGTGCTCGAGGAGAGCGAGGCCTTCTCCAAGCGCGACCTGCAGAAGATACAGAGCGACCTGCGAGGAGCCAAAATCTTCATCGGTATAAAGAAGCTGCTCGCTCTAATCGACATGGTGAAGCAGACCGACGAAGAATACAGAGTGTTCAAGTTCCTCACGAAGTTGCAGGAGGAGGGCTGCGGATTACACGCGCATACCACGTCGCCCACGACCGACCACACCGCGACCCTTTGTACGTCCAGAACTCACGGCGCCAAACTAACCGAGTGCGCACCTTGCACTTCAGACCTCCGCAGCTATGAAATAGACTACGATGACGTCAGCGAATGCACCGACTCTCCCTTAGACATCGGCTATCACAAAAAAGAAATGGCCGCCAAAAGGACCGAGATATCGCCCGCCAAAATGCCGCTGATGCGAATTCGAAGCGTCGAGATTGTATTTGAAGACGAAATGTCGACTTGCACCGACACCGGGCTCCTGGACCGCAGCGTGGAACTCGTCGTCTCGGACAGTAGCGATGATTCCACTAAATGCGCGGACGGTATCGAGCCTCTACCGCCCGAGAAAGATTGCGACTCTGTGACGCTCAACGCTGACGGCGACTTGTCGGAGGACGACTCATCATCGTCGCTGAACAAACACGAAATACCTGAAATCGTTATTCCACAGCCGACGGCTCCGGCACACGCGACCCTTCTAGTTCGAACAGAGAACGTAACGTCGCGGACGGATAATTTGGCGATGTCGCCAAGTTTCTCTGAAATGGCAGACTCCGGTCGATACACAGAGGAAGCTAGTTCATCCCATATAGACATCGTTGCGATGTCTTACGAAGACGCATTGCTTTCAAACTCCTTTGACGTTATCAATTTAGAGGAACTTCCGGCCGCGACTCGCTCTTACGATTCGGACTCAAGCTTGAAACCAGAGACTCCGAGATTATTGGAATACATTGACAGTAACAGTGACAGCTCAGACACGGAAACGTGTGACTTGGACAGTCGAACGCATCCTCTGACTCCTCTCAACTTCATCTTGTCCGATGACGACCACACGGTGTGCGACAGTTCCGATTTGCAGTACGACTCTTTTGTAGATATGGGGAAGTTTTAA
Protein
MSSMRMKAAKCPSDELAITNCALIHQDDFPSDIKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFSAPQRKWATLSIGQTIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLIQFANQVFTVGQQLAFLFQEKKVLSLIVKNLEAVDVQALAAGANAVPRRVRMGRLLPDASVQFDKAENSSLNLIGKAKGKQPRQSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKYFDDAYRSSLSCILVDNIERLLDYGPIGPRYSNLTLQALLVLLKKQPPKGRKLLILCTSSRRQVLEDMEILSAFTGVLHVPNLSQPEHLLSVLEESEAFSKRDLQKIQSDLRGAKIFIGIKKLLALIDMVKQTDEEYRVFKFLTKLQEEGCGLHAHTTSPTTDHTATLCTSRTHGAKLTECAPCTSDLRSYEIDYDDVSECTDSPLDIGYHKKEMAAKRTEISPAKMPLMRIRSVEIVFEDEMSTCTDTGLLDRSVELVVSDSSDDSTKCADGIEPLPPEKDCDSVTLNADGDLSEDDSSSSLNKHEIPEIVIPQPTAPAHATLLVRTENVTSRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSYEDALLSNSFDVINLEELPAATRSYDSDSSLKPETPRLLEYIDSNSDSSDTETCDLDSRTHPLTPLNFILSDDDHTVCDSSDLQYDSFVDMGKF

Summary

Description
Required for vesicle-mediated transport. Catalyzes the fusion of transport vesicles within the Golgi cisternae. Is also required for transport from the endoplasmic reticulum to the Golgi stack. Seems to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin (By similarity).
Catalytic Activity
ATP + H2O = ADP + H(+) + phosphate
Cofactor
Mg(2+)
Subunit
Homohexamer.
Similarity
Belongs to the AAA ATPase family.
Keywords
ATP-binding   Complete proteome   Cytoplasm   ER-Golgi transport   Hydrolase   Magnesium   Metal-binding   Nucleotide-binding   Protein transport   Reference proteome   Repeat   Transport  
Feature
chain  Vesicle-fusing ATPase 2
EC Number
3.6.4.6
EMBL
AGBW02010334    OWR48697.1    NWSH01002266    PCG68746.1    KY548397    APZ89680.1    + More
AF118384    AAF18300.1    PCG68747.1    ODYU01005445    SOQ46310.1    KQ459324    KPJ01539.1    KQ461073    KPJ09799.1    GECZ01017003    GECZ01013252    JAS52766.1    JAS56517.1    GEBQ01001090    JAT38887.1    NEVH01016289    PNF26292.1    KQ435789    KOX74480.1    GEDC01030689    GEDC01028091    GEDC01023926    GEDC01023325    GEDC01013279    JAS06609.1    JAS09207.1    JAS13372.1    JAS13973.1    JAS24019.1    KK852788    KDR16531.1    JR049505    AEY60986.1    KZ288470    PBC25332.1    AJWK01032124    AJWK01032125    AJWK01032126    GEZM01078395    GEZM01078394    JAV62742.1    NNAY01000881    OXU26085.1    GFDF01003394    JAV10690.1    GBYB01013543    JAG83310.1    GDAI01000338    JAI17265.1    GL451937    EFN78198.1    ADTU01018723    GBYB01013545    JAG83312.1    KQ976537    KYM81375.1    KQ981693    KYN37637.1    GL887908    EGI69457.1    KQ982472    KYQ56092.1    CH477222    EAT47276.1    KQ977110    KYN05689.1    JXUM01065739    JXUM01065740    KQ562363    KXJ76058.1    AY314995    AAQ83118.1    KQ414786    KOC60817.1    GFDL01000653    JAV34392.1    KQ978881    KYN27818.1    GBXI01001600    JAD12692.1    CVRI01000054    CRK99990.1    JRES01001065    KNC25860.1    KK107105    EZA59590.1    GDHF01030491    JAI21823.1    GAKP01015041    JAC43911.1    GL444608    EFN60826.1    GAMC01012390    JAB94165.1    GANO01001513    JAB58358.1    CH940655    EDW66151.1    CH933811    EDW06355.1    CH964291    EDW86472.1    OUUW01000003    SPP77784.1    KA646815    AFP61444.1    CH954180    EDV47221.1    CM000162    EDX01552.1    KQ971371    EFA10100.1    CH916371    EDV91937.1    CP012526    ALC46809.1    CH902622    EDV34611.1    KPU75214.1    CP012528    ALC49856.1    CH379063    EDY72037.1    CH479205    EDW30793.1    CCAG010020037    CH902617    EDV43701.2    CM000160    EDW97294.1    CH954181    EDV49167.1    AE014297    AHN57317.1    AHN57318.1    U30502    BT023784    U28836    JH431251    UFQT01000155    SSX20982.1    DS235019    EEB10551.1    GDHC01012273    JAQ06356.1    CH480815    EDW42261.1    LRGB01001348    KZS12965.1    GBHO01030815    GBHO01002606    GBHO01002601    JAG12789.1    JAG40998.1    JAG41003.1   
Pfam
PF02933   CDC48_2        + More
PF00004   AAA
PF02359   CDC48_N
PF17862   AAA_lid_3
Interpro
IPR004201   Cdc48_dom2        + More
IPR003959   ATPase_AAA_core       
IPR003338   CDC4_N-term_subdom       
IPR027417   P-loop_NTPase       
IPR003960   ATPase_AAA_CS       
IPR009010   Asp_de-COase-like_dom_sf       
IPR003593   AAA+_ATPase       
IPR041569   AAA_lid_3       
IPR039812   Vesicle-fus_ATPase       
IPR029067   CDC48_domain_2-like_sf       
SUPFAM
SSF54585   SSF54585        + More
SSF52540   SSF52540       
SSF50692   SSF50692       
PDB
3J99     E-value=0,     Score=2406

Ontologies

Topology

Subcellular location
Cytoplasm  
Length:
1049
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0538700000000001
Exp number, first 60 AAs:
0.00015
Total prob of N-in:
0.00282
outside
1  -  1049
 
 

Population Genetic Test Statistics

Pi
213.975098
Theta
150.621873
Tajima's D
1.81116
CLR
0.283492
CSRT
0.853557322133893
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 LKIFVLLRSFNIYSKKLQTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKG 100.00 8e-30
31250652 VTIFEVTDSEARNSTLQANRLSRRSGQKSPQKSPFLPSAKKSALKDPKRNTRKTESIKFDLSNLENGAQMSSDVLTVNDTTKRSDGDDTMSEEELTLRYSDSPSPSPRRPINSRSSRILESTIGTRLTVSPKQSLTQQRPRGRKSSRGSLILQKALTSSDLSHDLSSQSTSIASAYKTRTLSPRTRNMESYSIVDLVSID 97.30 6e-19
25044914 GIVNSMIK 95.83 5e-11
26822097 ISDFPFVK 100.00 7e-04
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