SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12958
Pre Gene Modal
BGIBMGA000240
Annotation
PREDICTED:_dedicator_of_cytokinesis_protein_3-like_[Papilio_polytes]
Location in the cell
Mitochondrial   Reliability : 1.906
 

Sequence

CDS
ATGTGGATACCATCGAAAACTCCGAAACTAGCCGTCGCGGTCTACAACTGGAAAGGGGATGTTCGATCAGGTTTACCTTTGGAAATAGGTGAAACTGTACAGATATTGGAGGAAAATGGAGCTTGGTTCCGTGGGTTCAGCACAAAAAACAGATCAACATGGGGTATTTTTCCTGCCTGTGTTGTGTCTCTCAGACCGTGCACTGTGAAAGGCTCTGGGGCAACAGCTGTTGCTGAATTGAAGGATGATCCTCTAGTTCGTGAAATTGCATGTGTATTGAGAGAATGGGCTAGGCTTTGGAAGAAATTATATGTGGAACGTGAAACGTACAGATTCAGCGCAGTTGCGAAGGTAATGAGGGAACTGTTAAGTGGACGGCGTGCTCTTCTCGCGGGGACCCTAACACAAGATCAGACTAGGGCGCTAAGACTGAAGCTTGTTTCTAAACTAGATTGGGGCAATAGGTAA
Protein
MWIPSKTPKLAVAVYNWKGDVRSGLPLEIGETVQILEENGAWFRGFSTKNRSTWGIFPACVVSLRPCTVKGSGATAVAELKDDPLVREIACVLREWARLWKKLYVERETYRFSAVAKVMRELLSGRRALLAGTLTQDQTRALRLKLVSKLDWGNR

Summary

Similarity
Belongs to the DOCK family.
EMBL
KQ459324    KPJ01549.1    NWSH01000333    PCG77319.1    RSAL01000021    RVE52484.1    + More
KQ461073    KPJ09809.1    KQ971372    KYB25392.1    GL887844    EGI69810.1    KQ976745    KYM75486.1    GBYB01007150    JAG76917.1    GBYB01007149    JAG76916.1    GALX01000669    JAB67797.1    KQ982409    KYQ56735.1    ADTU01022763    ADTU01022764    ADTU01022765    ADTU01022766    ADTU01022767    ADTU01022768    KQ982014    KYN30621.1    GEZM01073449    JAV65089.1    GEZM01073452    JAV65083.1    QOIP01000011    RLU16401.1    KQ980487    KYN15910.1    GEZM01073454    JAV65081.1    GEDC01030891    JAS06407.1    GEDC01025543    GEDC01015790    JAS11755.1    JAS21508.1    GEZM01073453    JAV65082.1    GECU01013589    JAS94117.1    GECU01019996    JAS87710.1    KQ760869    OAD58781.1    GEBQ01015887    JAT24090.1    GFXV01006941    MBW18746.1    GGMR01020346    MBY32965.1    KQ435774    KOX75088.1    NNAY01000509    OXU27932.1    GFXV01001434    MBW13239.1    GGMS01015078    MBY84281.1    KK852782    KDR16623.1    KZ288222    PBC32043.1    KK107105    EZA59498.1    KQ414614    KOC68873.1    AAZX01001292    AAZX01006521    AAZX01006718    AAZX01006766    AAZX01013753    AAZX01024928    GBBI01002727    JAC15985.1    GBHO01020424    JAG23180.1    ACPB03000870    GDHC01015973    JAQ02656.1    LJIG01022631    KRT79537.1    DS235340    EEB14973.1    GECZ01002496    JAS67273.1    JRES01001160    KNC25073.1    CP012526    ALC45635.1    KQ977606    KYN01422.1    GFDL01001105    JAV33940.1    GFTR01002688    JAW13738.1    AJVK01061505    GBYX01135134    JAO94787.1    UFQT01000109    SSX20149.1    APCN01005397    APCN01005398    APCN01005399    CH940650    EDW67478.2    CH902617    EDV42438.2    HAEB01019773    SBQ66300.1    CVRI01000006    CRK88153.1    CH964272    EDW84134.2    HADZ01016734    SBP80675.1    HAEE01001817    SBR21837.1    GFDL01011531    JAV23514.1    GFDL01011516    JAV23529.1    CH933806    EDW14468.2    JXUM01090538    KQ563846    KXJ73176.1    HAEC01013444    SBQ81661.1    HAEC01008141    SBQ76279.1    GAMC01010417    JAB96138.1    HAEJ01007273    SBS47730.1    JXUM01133534    KQ567992    KXJ69205.1    CM000070    EAL27887.4    AERX01048904    AERX01048905    AERX01048906    AERX01048907    AERX01048908    AERX01048909    AERX01048910    AERX01048911    AERX01048912    AERX01048913    JXJN01016991    CH477745    EAT36683.1    AE014297    ACL83574.2    AGB96429.1    AGB96427.1    AGB96428.1    AAF56821.5    GDHF01008033    JAI44281.1   
Pfam
PF16172   DOCK_N        + More
PF14429   DOCK-C2
PF06920   DHR-2
PF07653   SH3_2
Interpro
IPR026791   DOCK        + More
IPR001452   SH3_domain       
IPR032376   DOCK_N       
IPR036028   SH3-like_dom_sf       
IPR010703   DOCK_C       
IPR027357   DHR-2       
IPR035892   C2_domain_sf       
IPR027007   DHR-1_domain       
IPR026799   DOCK_2       
IPR037811   C2_Dock-B       
IPR016024   ARM-type_fold       
IPR026800   DOCK3       
SUPFAM
SSF50044   SSF50044        + More
SSF48371   SSF48371       
Gene 3D
PDB
3A98     E-value=5.10395e-24,     Score=269

Ontologies

Topology

Length:
155
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00965
Exp number, first 60 AAs:
0.00384
Total prob of N-in:
0.11204
outside
1  -  155
 
 

Population Genetic Test Statistics

Pi
258.330815
Theta
182.992167
Tajima's D
1.34828
CLR
0.022904
CSRT
0.744112794360282
Interpretation
Uncertain
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