SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12955
Pre Gene Modal
BGIBMGA000456
Annotation
PREDICTED:_uncharacterized_protein_LOC101744721_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.344
 

Sequence

CDS
ATGAGCTCTCCGGAGCCTCTGGTGCTCCAAGCGCTGCAGGGAAACACGCAGCTCAGTGACAAGTGGCCTGGACCTCGTGCCGTCAAGATATTCGTCGCTTCCGTATACAATGATTTTCGAGAAGAAAGACGGCAGATCTTAGAAATAGTCGGACCTGAACTCCAGTCAACTTACGATGATCGATACATCGAGATTGATTTTGTGGATATGCATTACGGAACAGACGGTGGAGATGAAACGAATCCGGCGTTATTACGGTATTATCTGGACGAAATAAGGTCTTGTAATCATTCCTCCAAAGCTGGATATTTTGTTTGTCTCTTTGGTGGTGATGCCTCATTGTACCACCCAGTTTTGCCTTATAAGATACCGTCAGATATCTTCGAACAGATGGTCATATCAGAAACAGCACAGGCTGACCTTGTTCGCGCCTGTTACCGTCTTAGTAGTGACGGGATTTACCACCTGGAAGACGATGACAAATGGTTCAGCGATCTTTTGGAACGAGACGAGCAACGTAGCCGCCTAGCCGAGGTACAGAAGGCATTCAATGCTGTGATTCTTGAGGCAATTTCCAGGGGAGTCGACGTTTCAAATCTGCTGCGAAGCCCAGTCGAAGCACAATGCGAATTAGCTCTGGAACTTTTATCAAACGGGAATCATCCCAAAGGACTTATAGCTGTGTTTCGTGACTTGGCGGAAGTTGAAGAGGACGACTCCAAAATTACTGTCCTCGCACATACAAGGCTGTTAGAACTGAAGAAAAAAATGGAAGAGACATTACCTGATACTCACTTTATAAGACTAGAGCCATCGTCTGCTGATTCTTCGAGGACGGATGGGGGATCTGAGAATGAAGAAAAATTAGCACCATTCAGGGAAAAAATTCTAGGCTTAGTGAGTTCACTAGTCGATGATAGTCTCAGTACTGAACCTGATCAAGGAAAGGGACGGAAGAAGACTGTACAGGAAGTTTTTCTCGAGCACATCACTCATTTAAGAATATGTATAGAACACGATCGAGCTTACAAAGTCAACGCTAAACAAATAGAAGAAGCATCTAAAAATATTTTGAGCACTGTGAAGGAAAATTACGAGAACCGAACTCGACATCCTCCGGTGTTAATATACGGGCCCGACGCTTCCGGAAAGACCACTTTGTTGACGCACTTGTACACAAAATGCGAGGAAATTTTCTCGAAGCCAGTTCTAAGGATAATAAGGTTTTCCGCTTCGACGCCGCGATCGGCCTACAACTTGGAACTTTTAAGAGTCATGTGCCAACAAATATCAATAATCTTGAACATTCCCGAAGGCTATTTACCTAAAGACGCCAGCTTTGATCCTCTGTACATTAATAACTGGTTTCAAAGTCTATTGCGGAGATGCGAAGAGATGGAAAATGAAATATTGTTTATATTTATTGATAACGTTCACAGAGTCAATCCTTTAGAGTGCGATATAGTAACAGGGCTGTCGTGGCTACCGATGTCTCTTCCAAGGAATGTCTTCCTAGTATGCACCAGTGCGATGTCTTTAGAGCAATTGCAATTGACCCCGGCGCAAAAGGAAAAGTTCAAAGTTCAGAACTGCTATTACTTTTTGGATGCTATCGAAGAAAGCCCGGAAAACAAATGCTACGGAGACTACATTGACGGTGCCTTCGATAATTTAGAAGTGGTCTTCGGTTCAAAGGCTTTTAGTAAATTAGCAAGTTATATAACTTGTTCGGAGTTTGGCCTAACGGAATTGGAACTTTTAGAACTTTTGATGCCGACGAGCAATAGCGAAGCCGTTATAACATTAAAAGATGCAAATTTTAACTTTTCAACGTTATGTGTCGCCAAGTACATGATGAAGAATCTCATAACAGAGACAATAGTGTCGGGACGTAGTACCTGGCGTTGGGCGGCGGCGGCGGCCGGTGCCCGGGCCCGACGCCGCTATGTTCGCGTGCAGAGCGCTCTTCGGGACGCCCATTCAGACCTTGCTGCACTACACTTCTCCTCCTTCCTCAACGACGCCGACGACACGGACACTTCAGAAGCACACGAGCTCGGTTGTGTAGACGATGACGACGCTCTTCTAGATTCGACGCCATTCCATTCGGCAAGTAGGACGGCGGCCGCTTTCACACAACGTCACGTAGAGGAGTCTTGGCTCCATTTACTTTTGGCTGGGGACTTCTCTAAGCTGAAGGACCTAACCGTTTGCAACTTCGACTTTTTACTAGCGGCCGTCCAAACGGTGACAATATCGTATTTACGCTGCATACTCGAGCACGTGCGTTGTTACATACTGGACAGAGACGTGGAACTCGTCTACGGAGCAGTTAAGAAGTCAAGTGACATATTAACACGGGATCCTATGCAGTTGGGAGCGCAGATAATAGCTTGGTTGCGGCCGGCAGTGGCTCGACGCGGTGTGCTCGCCACACTCGTGACAGCTGCGATGGCTTGGTGCGATGGATACGATAAGCCTCTACTCGTCCCTCTAAACGGCTGGCTTCACCCTCCTATAGCATCGACAGTCCGTGTCGTATCAGTGGGGGGCTCAAGTCCCGGTGCTGGTACAAGACTCCTCCAGTTGGCTCCCTCAGGACAGCATCTGGTACTCGCACCGTCGGCTGGAGACCCTCAACTTTGGCACATCATGTCGAATTCAAAGGTGCACACTTTCAAAGGACATTCGGGCAGCATTCTCTGTATGTGTGTGACCAGAGAATCACAATATCTACTCACAGGCTCTGAAGATACAAGCGTCATCGTCTGGGACTTACACACTTTAGCAGTTAAAACCAAAATATTAGAGCACATCGCACCTGTACTGTGCGTCGCAGCGATTGTGAATCGTTCGCTGGTGATTAGCGGTGGAGATGATTCCGCTGTTATAATCACATCTTTAGTGGACGGTGCCTTGGTAACAAAACTAGATCACCACAGAGGATCAGTGACATCTGTGAAAGTTATTCAAGATGGTAATATATTTATAACCGGATCCCAAGACGGCACTGTCTGCACTTGGAATGTAGAGAATTTTACCTTGCTATCAACTGTCACTGCTGGAGTGCCTATTCATATCTTCGATGTCACCGACGACAATGTCTTCCTACTCACACTGCAAGGGGACAACGAACTGCATCTTAGGACGTTCATAACGGGGACTTATTTACATCCCTTGAAAAGGCACAAAGCCAAGGTAAAGTGCTTCTGTGTTGCTCATGACTCGTCCCGGGTAGCGGTCGGTTGCGCCGACCAACGCATATATTTATATAGCTTACACAGCGCCCAACTGCTCCGGACATTGGCTGTGGCACACGACTTAGCAGCATTAGCTGTTGCTGATCGAGACCATTTCTTATTGGCTGCTGGTGGAAACAGAGTTACGATATACTCATTTCATACCGAAGACAACCTGACTAATTTCAGACCAACAAAACAAATGAAGAGACGTCAAACTAAATCCACCACAAATATTACTTTGCTTCAGGCTGAGCAAAGCGACTTGATACCAATAAGCTGCCTTGAAGTATCCCGAGACGGACAGCTTGGCGCCAGTGGATGCGCTCGTGGCCTTGTCAGAGTCTGGCAACTCTCAACACACAGATTACAAGCAACACTGAACGGCCATATAGGTCATATAACTTGTGTCACCTTTTCACCAAACAATCTATTGGTACTGAGTGGATCTGAAGACCGAACTGTGGTCGTTTGGCAGCTTGCGGATAATTCTCCTTCACTGACATATAAGGGTCATAGCTCAGCAATTCAAACCCTGCTGATGATGTCGGACGGGCGCCGTGCAATGTCAAGTGACAGGGCTCGTAATGTCCACGTCTGGCTCGTCGACTCTGGTATAGTTCTACATTCTGCAACCGGACCGTCAGCTAGTATTGACGTCACTTTAAATATGAAGTATGCTGTTCTATCGGACGGTGATAACTCAGTGCGGATCTGGTCTCTGGCTGGAGGTGATAATTCAGAAGACAACAGACGCTCAGTATCGCACGCCGAAAGAATCACCTGTTTCGCTTTGACCGCGGACTCACAGCATGTCGTCACTGGATCGATGGATATGTCACTGAAAGTTTGGAAATTGGATGGAGGGAAATTGTCACAGGTATTAGTCGGCCACTCAGACATAGTTACGTGCGTAGCAGTATCAATAACGAACAAAACTCAAGTTGTATCCGGCTCCTGGGACTGCAACCTTATTGTGTGGGACATAAATACTGGTTCTGATCTGCATTTGTTATCTGGACATCTTGGGAAAGTGACTTGCGTCAAAGTAACCGGGGACGGTACGATTGCGGTATCCTGCGCTGAAGACAAGACTCTTATAATATGGGAAACTAAAAGAGGTCTTGCTTTGACATCATTTTCATTACATGTCCCTTTACTCGGATTCCAAATAACAAGCGACTGTGCGAGAGTTGTAGTTCATCTTTTGGATAGAGGTTGTCTACCAATTATATGTTTGCACAATACACCGGCAACTTACGTTAAAATACCAACATATACAGCGCCAACCAAAGACGTGGATGAATTGCGTCCGTTGGCACCAAAAAGACCTATGAGAAGGCTACTGAAAAAGGAGGTATCACTTGATACGTACACGTGGCAGAAGAAATACGGACATCTCACTTCTGCGGCTATGATGGCTCAAGTAGATGAACGATTAAAAAGAAGATTCTCAGTATCTGCCTCTATGGAAGAAATATCCAAAATACAGGAGGCCAAGAATAAGGATTTGGGTTCACAGGTGAGTCTTGGTCCTGAGGAAGCAGCAATTGCTCAATCGCAACATTTCGATCAATTAGAAGCTTTGTGGAACAAGATATCACCTCCAAGACGTCGCTCAAATAAGTCCTTATCAAAGCAAAGTTCATTGATCGAAAGATTTGACTCTTCAGATGAAGAACATACCCCTGTCGAAGAACAAGAACATATGGTTGAGTAA
Protein
MSSPEPLVLQALQGNTQLSDKWPGPRAVKIFVASVYNDFREERRQILEIVGPELQSTYDDRYIEIDFVDMHYGTDGGDETNPALLRYYLDEIRSCNHSSKAGYFVCLFGGDASLYHPVLPYKIPSDIFEQMVISETAQADLVRACYRLSSDGIYHLEDDDKWFSDLLERDEQRSRLAEVQKAFNAVILEAISRGVDVSNLLRSPVEAQCELALELLSNGNHPKGLIAVFRDLAEVEEDDSKITVLAHTRLLELKKKMEETLPDTHFIRLEPSSADSSRTDGGSENEEKLAPFREKILGLVSSLVDDSLSTEPDQGKGRKKTVQEVFLEHITHLRICIEHDRAYKVNAKQIEEASKNILSTVKENYENRTRHPPVLIYGPDASGKTTLLTHLYTKCEEIFSKPVLRIIRFSASTPRSAYNLELLRVMCQQISIILNIPEGYLPKDASFDPLYINNWFQSLLRRCEEMENEILFIFIDNVHRVNPLECDIVTGLSWLPMSLPRNVFLVCTSAMSLEQLQLTPAQKEKFKVQNCYYFLDAIEESPENKCYGDYIDGAFDNLEVVFGSKAFSKLASYITCSEFGLTELELLELLMPTSNSEAVITLKDANFNFSTLCVAKYMMKNLITETIVSGRSTWRWAAAAAGARARRRYVRVQSALRDAHSDLAALHFSSFLNDADDTDTSEAHELGCVDDDDALLDSTPFHSASRTAAAFTQRHVEESWLHLLLAGDFSKLKDLTVCNFDFLLAAVQTVTISYLRCILEHVRCYILDRDVELVYGAVKKSSDILTRDPMQLGAQIIAWLRPAVARRGVLATLVTAAMAWCDGYDKPLLVPLNGWLHPPIASTVRVVSVGGSSPGAGTRLLQLAPSGQHLVLAPSAGDPQLWHIMSNSKVHTFKGHSGSILCMCVTRESQYLLTGSEDTSVIVWDLHTLAVKTKILEHIAPVLCVAAIVNRSLVISGGDDSAVIITSLVDGALVTKLDHHRGSVTSVKVIQDGNIFITGSQDGTVCTWNVENFTLLSTVTAGVPIHIFDVTDDNVFLLTLQGDNELHLRTFITGTYLHPLKRHKAKVKCFCVAHDSSRVAVGCADQRIYLYSLHSAQLLRTLAVAHDLAALAVADRDHFLLAAGGNRVTIYSFHTEDNLTNFRPTKQMKRRQTKSTTNITLLQAEQSDLIPISCLEVSRDGQLGASGCARGLVRVWQLSTHRLQATLNGHIGHITCVTFSPNNLLVLSGSEDRTVVVWQLADNSPSLTYKGHSSAIQTLLMMSDGRRAMSSDRARNVHVWLVDSGIVLHSATGPSASIDVTLNMKYAVLSDGDNSVRIWSLAGGDNSEDNRRSVSHAERITCFALTADSQHVVTGSMDMSLKVWKLDGGKLSQVLVGHSDIVTCVAVSITNKTQVVSGSWDCNLIVWDINTGSDLHLLSGHLGKVTCVKVTGDGTIAVSCAEDKTLIIWETKRGLALTSFSLHVPLLGFQITSDCARVVVHLLDRGCLPIICLHNTPATYVKIPTYTAPTKDVDELRPLAPKRPMRRLLKKEVSLDTYTWQKKYGHLTSAAMMAQVDERLKRRFSVSASMEEISKIQEAKNKDLGSQVSLGPEEAAIAQSQHFDQLEALWNKISPPRRRSNKSLSKQSSLIERFDSSDEEHTPVEEQEHMVE

Summary

EMBL
NWSH01000624    PCG75186.1    RSAL01000021    RVE52486.1    KQ459324    KPJ01553.1    + More
AGBW02011563    OWR46484.1    KQ461073    KPJ09812.1    BABH01013442    BABH01013443    BABH01013444    NEVH01017442    PNF24563.1    AAAB01008905    EAA09696.4    AXCN02001008    ATLV01021838    KE525324    KFB46917.1    CH477213    EAT47653.1    APCN01005356    GFDF01008518    JAV05566.1    KQ971307    EFA11188.2    CVRI01000075    CRL08528.1    CM000071    ENO01722.1    EAL25901.1    CM000158    KRJ99998.1    ENO01721.1    KRT02662.1    KRJ99997.1    KRJ99995.1    KRJ99999.1    EDW91621.1    CH954179    KQS62090.1    KRJ99996.1    GBXI01006461    JAD07831.1    OUUW01000001    SPP75848.1    AE013599    AAF57681.2    AAM68460.1    EDV55092.1    KK853024    KDR12325.1    AAF57680.2    KQS62091.1    AAM68461.1    PNF24562.1    CM002911    KMY94863.1    CH902619    KPU76200.1    CH964282    EDW85717.1    KMY94856.1    KMY94868.1    BT015296    AAT94525.1    EDV36410.1    KPU76199.1    KMY94860.1    KMY94861.1    KPU76198.1    CH916367    EDW02743.1    KMY94855.1    KMY94857.1    KMY94867.1    KMY94859.1    KMY94862.1    KMY94864.1    KMY94865.1    KMY94866.1    SPP75847.1    CH933808    EDW08764.2    KRT02663.1    CH480816    EDW48470.1    KRG04264.1    CH940648    EDW62167.1    KRF80476.1    KRF80475.1    KRF80477.1    KRF80478.1    GGFL01000827    MBW65005.1    GGFL01000616    MBW64794.1    ADMH02001080    ETN64158.1    GGFL01000830    MBW65008.1    CP012524    ALC40877.1    KMY94858.1    KRG04263.1    CM000362    EDX07687.1    KQ976401    KYM92541.1    ADTU01013240    ADTU01013241    KQ978023    KYM97889.1    KQ979851    KYN18829.1    KQ981490    KYN41057.1    LBMM01000514    KMQ98169.1    KQ982769    KYQ50823.1    GL435569    EFN73134.1    GL453806    EFN75451.1    KK107455    EZA50412.1    GAMC01021637    JAB84918.1    GAMC01021639    JAB84916.1    GL888182    EGI65679.1    ACPB03014480    AAZO01007425    GAMC01021635    JAB84920.1    DS235882    EEB20232.1    GBYB01013671    JAG83438.1    KQ760184    OAD61624.1   
Pfam
PF00400   WD40        + More
PF13191   AAA_16
PF12894   ANAPC4_WD40
PF13360   PQQ_2
PF13271   DUF4062
Interpro
IPR001680   WD40_repeat        + More
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR019775   WD40_repeat_CS       
IPR020472   G-protein_beta_WD-40_rep       
IPR017986   WD40_repeat_dom       
IPR027417   P-loop_NTPase       
IPR036322   WD40_repeat_dom_sf       
IPR003593   AAA+_ATPase       
IPR041664   AAA_16       
IPR024977   Apc4_WD40_dom       
IPR011044   Quino_amine_DH_bsu       
IPR002372   PQQ_repeat       
IPR025139   DUF4062       
SUPFAM
SSF52540   SSF52540        + More
SSF50998   SSF50998       
SSF50978   SSF50978       
SSF50969   SSF50969       
Gene 3D
PDB
2YMU     E-value=4.755e-32,     Score=350

Ontologies

Topology

Length:
1652
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0187199999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00052
outside
1  -  1652
 
 

Population Genetic Test Statistics

Pi
29.381729
Theta
169.971069
Tajima's D
-1.288931
CLR
2252.316436
CSRT
0.088145592720364
Interpretation
Uncertain
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