SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12948
Pre Gene Modal
BGIBMGA000237
Annotation
PREDICTED:_folliculin-interacting_protein_2_isoform_X1_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 3.912
 

Sequence

CDS
ATGGCATTTCTAGACAAATTGCTTCATAGAAGTAAAAAACTCGGTATTGATATTCACGAGAAGCGAAACCGGGACAGGTTCTGCCAAATAACTTCAGAGCAAGTTCGATTGCTTTTATTTAAAGAGTGTGACTGGAGAGGCAGGAAGATTCTATTTGATTCCTCATCCATACAAAAAGTACCTGCCGGCAAAAATGATAAGCCCACATTCAGGCAGACAGATGAGTTGCCATGCATTGTCGAGGTCACAGATGGATTCAGTTATTTGTACAAGGGTCCGTCGTCTGACGCGAGTGTCCTCGGTGAGATGATATTCGGTGCCGTCGCTATGAACTGCAGGAATGTTTCATTGAAAATCCATGTCATGGACGAACCTAGAAGATTAATGTGCACGAAAATATTCTTCGTGCCTACATCGCGACGTATAAGCCGAGGAGAAAGGAAAAACGATAGGCGCGAGGCAGAGAGCTGTAGCTACCTCAGGAATGAATCTAAGCCTCTAAACGTGCCTACGATGAATGAAGAGGGAGCTCTCTCGTTGAGCTCCTCGATGGGGAGAGGGGATTCAGGTTTTTGCGGGGACAGTTCACCGTACAGCAGTCTCGGTTCGACGCACGATTATTTCTGTATGTTCGAAAACTGCGATGGGAGACCTCAGGAAGACATATATTCTCTTCACTACCCACCCGGACGGAAACTGAGCATATCGAGTAACGGTAGCTGGCAGCGTAGGACCTTCCAGAACATGGCAACGAGATTCGACCTCGGGCACAAGAGTTCCAGCTCCCTTAGCGTCCCGACTGCCTTCAGTAATGGAACCAGCGCGACCAGCTGTGACTCTCAGGTATACAGTAACAGCTCGACAAGTGGTACAAGTGAGAGCATCACGAGTAGTTCGGCATCGGCAGTTCAAAAGAAGAACAAGCTAGGGCTGGCTCTTCTTATAACCATGACCGACTCTTCGGATATGGATTTGGTACGTCGTTGCGTGGAGCACTCACCACAACTCCAAGCCATGGTGTGTAGGTTAAGGCTTGCAATACTGGCGGCCGGGACTTGCGGGGCCTTCGTGTCGACTTTGCATCGAGCAGCCGAAGACGCTGCCAAATGGCTCACAGATCTGATGTACGGGCCCCGTTTGCAGCCGATGTGGTTGAATCTAGTCACGAGTGAGAAGCCCGGAGCTTCGAATAAAATGGCCGAGTCGCTGCTGTCCGATCTCTGTTCCGTATTGGCCGTTGGAGACACGAAGAATACAAACTTTTTCATCAGTACACTTGTAACGTACGTGCTCACATACCATCTCGGTTGGGTGTCCACGGTCAGCCCTTACGACAGTGAGGTCCACCAAACGGCTGCGACGAAGTTAAACGACTCCAAACGTCCGTACAACGTTCTGTGGGCACAGCTCAATGATCTCTGCGGAAATATTGGTTTTCCACCTCGCGCCGCTCGCACTATCATCAGTGGCACGACCAACACCCAGTTCGTCAACAGGCTACTAGTAATTTTGACTTACTTCATTCGATGCGGCGAAGTCAAACGAACCGACTTCCTCTACCAGAATGTTCCGGTGAAAGAGATTAGAGTGGTCAATGTCGATCAGCCTGAGGGTGGATTGAAACGAACAGCGACTCGCGCGAGCAAATTATCACAGTGTGAAACTCTAAATGAACAATTGAATGCTCAGAACAGTGATTGCAGTGTCGGTACTTTGGTACCGAGCGAAGTTGGATTGAAGAAATCGTCGACGCACGCAAATCTAAATCAGAAGCTCTCTAGTAGTGCGCAGTTTGCTATAGAAGGCGGCTCAAACACAGAACCAGTTACCGGTCACCTGAAGAGAAACACCACCATGATGCTCTTATCTAAAGCGTATTCGGATTCTAGTCTTAGCTCATCGATATCAGACGCCGAGCCCGAGCAGGTCATCTTCGTCCTGGGCGATAATGAGAAATTAGTTGGACTCAAAAACAAGTCTGCCAGCGGGAAGAGTGTCAAGAAATCCTCTAAAATACACAACGAACCCCTAGAGATAGAGATCCCTGAAAACAAGATAGAGAAATGTACGAAGGATAACTGCGAGAAGTCCGACAGCCCTTCCAAATGCTGCGGGCAAACACTTCAACATTCCAAACCTATAAAACATTCCGGTTTTAAGTTCGAGTTCGATAAGTACCCTCAGATAGTGACAAATTACATGAAGAGTAAGAATTTAGAGATTCTCGACAGGCATTACATTGGGAAACCGGGGAATTTGAAGTTGGACAACTACCAGTTCGATCCCATGATCGTGCCGCCGATACAAGAGGAGAGATGCGAGACTTGCGTCAAGTGCCAGCTGATGGAATCGCTGCTGCAGACGCCCACTAACGCTTCCGAAATGGAGTACATGAATGACATACCGCGACAGTCGGAACCCCAACACGCAAAGGAGACCATAGTCAGAGACAATCAGACCCATCGAGAACTATCGCCTAAAACATTCGTTCGAGTACAAAAAGAGAACACATTAATTGTTAACGTTGCCAAGATCGAAGATAGGATTAGTAACTTAGAGGCCAAAAGGCCTGAGAGGAAGACAAGTAGAGATAAAATGAACGAAAGGCAGATGAAAGTAAAGCAAGTCATAGAAATCCCGTTACAACGGTTGCAAGTTATGGGCAGACCTTGTCTGTTGAGGTCTGGATACGACGCGTCTTTACTCGGAGGAATCACAGATCATTATGTACCTGATTTAGTATTACAAGGAACATTGGCCGAGCCGAATGCGTGGGAGACGGATCTGCGACGAGACCTGGACTTGACGTCGCATCTGAACAAGACTGTCGAGTGCTCCTTACAATCCGTGGCTATTGTCGGGGACACTAACTCCTGGGAAGTTCGCATTGTGGGTAGAGATTGCTGTTCCGGTGGGATGTCGCCGTTAGTGGGCTCCATGCTAGACGCACTGCCGATCATGTGGAAGGCAAAAGTACCGGCACACGAGTGTCTATCATTCTTAGAAGGGAAACTTCGCGAGTTCTGCGTCCTTTCAAAAACTCTGGCCGAGATGCTAATGTCTACGGATTTCTGCGATATTGCAACTCTGACGAAGTCTCTGAACGTTGACATGAATGACGTTCCCTTGTTAATGGCCGTAGCCACCACGCACACTCCACAAGTCGCAACCAGATACGGGATTAGTTATAGAATCGAATTTGTAGAGTTTTTAGAATTAGTACCCTCACTGAAATAA
Protein
MAFLDKLLHRSKKLGIDIHEKRNRDRFCQITSEQVRLLLFKECDWRGRKILFDSSSIQKVPAGKNDKPTFRQTDELPCIVEVTDGFSYLYKGPSSDASVLGEMIFGAVAMNCRNVSLKIHVMDEPRRLMCTKIFFVPTSRRISRGERKNDRREAESCSYLRNESKPLNVPTMNEEGALSLSSSMGRGDSGFCGDSSPYSSLGSTHDYFCMFENCDGRPQEDIYSLHYPPGRKLSISSNGSWQRRTFQNMATRFDLGHKSSSSLSVPTAFSNGTSATSCDSQVYSNSSTSGTSESITSSSASAVQKKNKLGLALLITMTDSSDMDLVRRCVEHSPQLQAMVCRLRLAILAAGTCGAFVSTLHRAAEDAAKWLTDLMYGPRLQPMWLNLVTSEKPGASNKMAESLLSDLCSVLAVGDTKNTNFFISTLVTYVLTYHLGWVSTVSPYDSEVHQTAATKLNDSKRPYNVLWAQLNDLCGNIGFPPRAARTIISGTTNTQFVNRLLVILTYFIRCGEVKRTDFLYQNVPVKEIRVVNVDQPEGGLKRTATRASKLSQCETLNEQLNAQNSDCSVGTLVPSEVGLKKSSTHANLNQKLSSSAQFAIEGGSNTEPVTGHLKRNTTMMLLSKAYSDSSLSSSISDAEPEQVIFVLGDNEKLVGLKNKSASGKSVKKSSKIHNEPLEIEIPENKIEKCTKDNCEKSDSPSKCCGQTLQHSKPIKHSGFKFEFDKYPQIVTNYMKSKNLEILDRHYIGKPGNLKLDNYQFDPMIVPPIQEERCETCVKCQLMESLLQTPTNASEMEYMNDIPRQSEPQHAKETIVRDNQTHRELSPKTFVRVQKENTLIVNVAKIEDRISNLEAKRPERKTSRDKMNERQMKVKQVIEIPLQRLQVMGRPCLLRSGYDASLLGGITDHYVPDLVLQGTLAEPNAWETDLRRDLDLTSHLNKTVECSLQSVAIVGDTNSWEVRIVGRDCCSGGMSPLVGSMLDALPIMWKAKVPAHECLSFLEGKLREFCVLSKTLAEMLMSTDFCDIATLTKSLNVDMNDVPLLMAVATTHTPQVATRYGISYRIEFVEFLELVPSLK

Summary

Pfam
PF14638   FNIP_C        + More
PF14636   FNIP_N
PF14637   FNIP_M
Interpro
IPR028086   FNIP_C_dom        + More
IPR026156   FNIP_fam       
IPR028084   FNIP_N_dom       
IPR028085   FNIP_mid_dom       
IPR037545   DENN_FNIP1/2       

Ontologies

GO

Topology

Length:
1078
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.144570000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00105
outside
1  -  1078
 
 

Population Genetic Test Statistics

Pi
200.650453
Theta
179.858122
Tajima's D
0.169196
CLR
0.403916
CSRT
0.420978951052447
Interpretation
Uncertain
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