SGID The Silkworm Genome Information Database
Gene
KWMTBOMO12936
Annotation
hypothetical_protein_KGM_13035_[Danaus_plexippus]
Location in the cell
PlasmaMembrane   Reliability : 4.024
 

Sequence

CDS
ATGTGTCGAACAGCGCATGCTATCCTCCAAACAGCAATATGTGGGGTTCAAATGCTCGTCCGCGTCTTTATGACGGTCATACTTATGCTAGAGAACGTGATTCGGATGGTGTTGCAAACATCGTATAATTTCATTTCGTTCATGCTCCAAATGATATCACTAATACCTATATGCGTTGTTTTTCTCCTCACTGCGAGACTAAAATGTTTCATGTGTGGAGGGGGCGGGCCCTGTCCCGTGAATAAAGGAGGCGCCTGCGACTGCCTTATGTCCGCAGTGGCCATTGTTATTCTCTTCATCATCTTCAGAGCGACTGGCGTGCTGGACAAGATGTTATACAGTATCGGCTACGTTAAAGCTCGGGCCTTAGCTCACACGCGGTTCGTGCCTACGCCAGGTGATATCACGGAATGTTCTAGAAACCAAACAGAGGAAACCGAGACTATTCATGGTATTATGTCCACTAGTGAAATGACGCATGGGACAAACAGCATGCATACGACAGCCACGGAGATTTTCAAATCGACTACATCGAAGAAATTGTTGAGGGAGGGTCTGTTTTTTAAATTAACCACTCTGTCCAGCGATAATTTTGATACGATAATAGAGCACTACTTCGCGTGA
Protein
MCRTAHAILQTAICGVQMLVRVFMTVILMLENVIRMVLQTSYNFISFMLQMISLIPICVVFLLTARLKCFMCGGGGPCPVNKGGACDCLMSAVAIVILFIIFRATGVLDKMLYSIGYVKARALAHTRFVPTPGDITECSRNQTEETETIHGIMSTSEMTHGTNSMHTTATEIFKSTTSKKLLREGLFFKLTTLSSDNFDTIIEHYFA

Summary

Ontologies

Topology

Length:
207
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
63.5532800000001
Exp number, first 60 AAs:
39.12548
Total prob of N-in:
0.96376
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  43
TMhelix
44  -  63
inside
64  -  87
TMhelix
88  -  107
outside
108  -  207
 
 

Population Genetic Test Statistics

Pi
30.164356
Theta
35.015665
Tajima's D
-0.546917
CLR
1.166967
CSRT
0.234838258087096
Interpretation
Uncertain
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