SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12935  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000232
Annotation
calcyphosphine_isoform_2_[Bombyx_mori]
Full name
Anoctamin      
Location in the cell
Cytoplasmic   Reliability : 1.653 Nuclear   Reliability : 1.927
 

Sequence

CDS
ATGTATTTAGGAAAACCGAAAACATCTTCCAACATTGCGTGGCACAGACCGATGTCTGCTGGTTCCGTCCAGGAGGAAGAGCTGATGCAAAAGAGTGCTCGTGCTATGACACAAGCTACTGATCCTCTGGAGAAACTGCGCTTGCTTTGCTTGTCCCGAGGTGCTTCAGGGATCTTGGGACTTGGAAGAATTTTCCGTCGCATGGATGATGATGGAAGTAAACTACTGAACAAAGAAGAATTCCTTTATGGCATCAAGGAAACAGGGCTGGAACTTAATAAAAGTGAAGCCGAAGAACTCTTCAGTCAATTCGACACAGACAGTAGTGGCTCAATCAGTCTTGATGAATTCCTTATTAAAATCCGTCCTCCCATGTCGGAATCGCGTCGTAACATTGTAGAACAAGCATTCAAGAAGCTTGACAAGACTGGTGACGGTGCAATCACAATTGATGACATTAAAGGTGTTTACTCTGTCGATTCTCAGACCAGATATAAGAGCGGCGAAGAAACTGAAGATGTAATAATGAAGAGGTTCCTCGCGAATTTTGAGTCCGATGGAACAGTCGATGGGAAGGTTACTCTTGAAGAGTTCATGAACTACTACAGTGGCATCAGTGTCTCCATTGACAACGACTGCTATTTTGACCTAATGATGCGTCAGGCGTACAAGCTCTAA
Protein
MYLGKPKTSSNIAWHRPMSAGSVQEEELMQKSARAMTQATDPLEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQAFKKLDKTGDGAITIDDIKGVYSVDSQTRYKSGEETEDVIMKRFLANFESDGTVDGKVTLEEFMNYYSGISVSIDNDCYFDLMMRQAYKL

Summary

Similarity
Belongs to the anoctamin family.
EMBL
DQ443222    ABF51311.1    DQ443221    ABF51310.1    BABH01013495    NWSH01002941    + More
PCG67244.1    ODYU01003154    SOQ41550.1    AF117582    AAF16704.1    RBVL01000197    RKO10832.1    AK401838    BAM18460.1    RSAL01000021    RVE52503.1    GAIX01004506    JAA88054.1    AGBW02010923    OWR47509.1    KQ460968    KPJ10222.1    KQ459324    KPJ01566.1    GAPW01004254    JAC09344.1    KQ971342    EFA03890.2    GALA01000851    JAA94001.1    PYGN01000151    PSN52705.1    KK852651    KDR19448.1    DQ440379    CH477513    ABF18412.1    EAT39728.1    APCN01000220    ATLV01012365    KE524785    KFB36623.1    GGFL01006209    MBW70387.1    ADMH02000582    ETN65760.1    GL888406    EGI61480.1    GGFJ01009282    MBW58423.1    GBRD01015557    GDHC01015624    GDHC01014709    JAG50269.1    JAQ03005.1    JAQ03920.1    GBHO01017011    JAG26593.1    GBRD01015555    JAG50271.1    KQ435090    KZC14570.1    AAAB01008807    EAA04113.4    AJWK01024422    GGFJ01009283    MBW58424.1    NEVH01022634    PNF18755.1    GDHC01012653    JAQ05976.1    GGFK01004235    MBW37556.1    AXCM01000560    GGFM01001269    MBW22020.1    KQ982805    KYQ50497.1    GBHO01017008    GBRD01015556    GDHC01005823    JAG26596.1    JAG50270.1    JAQ12806.1    KQ435718    KOX78972.1    GL440936    EFN65229.1    KQ977294    KYN03882.1    KQ979182    KYN22309.1    GGFJ01009285    MBW58426.1    GBGD01002932    JAC85957.1    AXCN02000591    JXUM01082355    KQ563307    KXJ74089.1    GFDL01005024    JAV30021.1    KZ288266    PBC30195.1    GECL01001233    JAP04891.1    GBBI01004783    JAC13929.1    KQ976439    KYM86781.1    ADTU01018872    DS231815    EDS35166.1    KK852611    KDR20276.1    ACPB03005879    KQ981693    KYN37804.1    GANO01000681    JAB59190.1    GL453806    EFN75476.1    UFQT01000679    SSX26512.1    KQ414756    KOC61609.1    SSX26511.1    JXUM01008681    KQ560266    KXJ83465.1    KB630812    KB630813    ERL83880.1    ERL83885.1    NNAY01001377    OXU24176.1    GEDC01029445    GEDC01002030    JAS07853.1    JAS35268.1    GEZM01063622    JAV69046.1    GECZ01002591    JAS67178.1    KK107105    QOIP01000011    EZA59547.1    RLU17223.1    BT127904    AEE62866.1    CVRI01000035    CRK92872.1    GBYB01005289    JAG75056.1    GECU01001207    JAT06500.1    LJIJ01001230    ODM92441.1    GEBQ01007390    JAT32587.1    GEBQ01005280    JAT34697.1    GL762838    EFZ20689.1    PYGN01000164    PSN52383.1    NEVH01021933    PNF19230.1    GFDF01006288    JAV07796.1    UFQS01001307    UFQT01001307    SSX10237.1    SSX29925.1    QCYY01002453    ROT70209.1    GFTR01003231    JAW13195.1    LNIX01000014    OXA46942.1   
Pfam
PF13202   EF-hand_5        + More
PF13499   EF-hand_7
PF13405   EF-hand_6
PF13833   EF-hand_8
PF07165   DUF1397
PF04547   Anoctamin
PF16178   Anoct_dimer
Interpro
IPR011992   EF-hand-dom_pair        + More
IPR002048   EF_hand_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR029633   CAPSL       
IPR009832   DUF1397       
IPR032394   Anoct_dimer       
IPR007632   Anoctamin       
SUPFAM
SSF47473   SSF47473       
PDB
3E3R     E-value=8.90869e-46,     Score=460

Ontologies

Topology

Subcellular location
Membrane  
Length:
225
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04958
Exp number, first 60 AAs:
0.0357
Total prob of N-in:
0.11562
outside
1  -  225
 
 

Population Genetic Test Statistics

Pi
249.90284
Theta
172.872594
Tajima's D
1.575467
CLR
1.116297
CSRT
0.8011599420029
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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