Gene

KWMTBOMO12930  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000231

Annotation

vacuolar_ATP_synthase_21_kDa_proteolipid_subunit_[Bombyx_mori]

Location

Bomo_Chr22(+):4484320-4488126      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.237

CDS

ATGAGATACTTCTTAAGTTACTTATTCGTGCTCCTGGTGGGACTTGCAATCCCGATATTTTCGCTGTACTACGTCCTCAATGGAAAGGGTGAGCAGATAAGTTTGGGATGGTTCTTGGAGAACACTTCCCCGTATATGTGGGGTACCCTCGGAATCGCCTTTTCCGTTGCCCTGTCCGTTGTCGGAGCAGCCATGGGCATCCACACTACTGGTGTCAGCATAGTGGGAGGAGGTGTCAAAGCACCTAGAATCAAGACTAAGAATTTGATCTCCGTCATCTTCTGCGAGGCCGTCGCCATTTACGGTTTGATCACTGCTATCGTGCTCTCTGGTATGCTGGAGAAATATTCTGAACCATTTACTAGTGTGTCCGTCAAGCAGCAGAACTGGATGGCGGGATACGTGATGTTCGGCGCTGGACTCGCTGTTGGCTTGGTGAATCTATTCTGTGGAATTGCTGTTGGTATCGTGGGCTCTGGTGCTGCTCTAGCGGATGCTGCCAACGCTGCCTTGTTCGTCAAGATCCTCATCGTTGAGATTTTTGGATCTGCCATTGGTCTTTTTGGCCTTATTGTTGGCATTTATATGACATCAAAAGTAAAAATGGGCAACCAGTAA

Protein

MRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCGIAVGIVGSGAALADAANAALFVKILIVEIFGSAIGLFGLIVGIYMTSKVKMGNQ

Similarity

Belongs to the V-ATPase proteolipid subunit family.

Uniprot

Q2F630   A0A0N0PBL6   A0A194Q852   A0A0C5DCC5   A0A0C5DGH6   A0A0C5DBS7   + More
A0A0C5DCF6   A0A0C5DU88   A0A0C5DBW0   A0A0C5D7T1   A0A0C5DUC0   A0A0C5DBU1   A0A0C5D7R7   A0A0C5D7R1   A0A0C5DBT1   A0A0C5D7S5   A0A0C5DCF3   A0A0C5DU86   A0A0C5DGJ6   A0A0C5DGJ7   A0A0C5DBT3   A0A0C5DU73   A0A0C5DCE0   A0A0C5DGM6   A0A0C5D7W4   A0A0C5DU61   A0A0C5DCD2   A0A0C5D7Q3   A0A0C5DBX3   A0A0C5DBR5   A0A0C5DGH5   A0A0C5D7X7   A0A0C5D7W9   A0A0C5DCD8   A0A0C5D7V7   A0A0C5DBT9   A0A0C5DGI3   A0A0C5DUB3   A0A0C5DU68   A0A0C5D7U6   A0A0C5DGL3   A0A0C5D7V3   A0A0C5DCD4   A0A0C5DBV1   A0A0C5DU94   A0A0C5DCJ3   A0A0C5DUA2   A0A0C5DBU8   A0A0C5DCI0   A0A0C5D7U8   A0A0C5DUD0   A0A0C5DCJ7   A0A0C5DCG5   A0A0C5DGL5   A0A0C5DGI9   A0A0C5D7T6   A0A0C5DBT6   A0A0C5DUC5   A0A0C5DU76   A0A0C5DUA6   A0A0C5DGM0   A0A0C5DU83   S4PYG2   A0A0L7LH25   A0A0C5DBQ7   A0A0C5DU55   A0A0C5DGN3   A0A0C5DCK2   A0A0C5D7T9   A0A0C5D7S1   A0A0C5D7U2   A0A0C5DCE7   A0A0C5DCF9   A0A0C5DGJ4   A0A0C5DUB7   A0A0C5DGG7   A0A0C5DGL8   A0A2A4J6K8   A0A2H1WIH9   A0A0C5DU51   A0A1E1W7P6   A0A0C5DU79   G3K8G5   G3K8E0   G3K8D7   A0A0C5D7P6   A0A0C5D7S8   G3K8E2   G3K8G8   G3K8E7   G3K8G4   A0A0C5DGH1   A0A3S2NYT8   A0A0C5DBR1   A0A0C5D7R3   A0A0C5DGH9   A0A0C5DCC3   A0A0C5DU59   A0A0C5DCI8   A0A0C5DCI4  

Pubmed

19121390    26354079    25634098    23622113    26227816    21841803    + More

EMBL

BABH01013510    DQ311242    ABD36187.1    KQ460968    KPJ10226.1    KQ459324    + More
KPJ01569.1    KP074185    AJO66019.1    KP074194    AJO66028.1    KP074223    AJO66057.1    KP074235    AJO66069.1    KP074236    AJO66070.1    KP074278    AJO66112.1    KP074237    AJO66071.1    KP074281    AJO66115.1    KP074248    AJO66082.1    KP074217    AJO66051.1    KP074207    AJO66041.1    KP074228    AJO66062.1    KP074227    AJO66061.1    KP074230    AJO66064.1    KP074231    AJO66065.1    KP074229    AJO66063.1    KP074234    AJO66068.1    KP074233    AJO66067.1    KP074211    AJO66045.1    KP074209    KP074210    AJO66044.1    KP074283    KP074284    AJO66118.1    KP074279    KP074282    AJO66116.1    KP074196    AJO66030.1    KP074195    AJO66029.1    KP074197    AJO66031.1    KP074298    AJO66132.1    KP074198    AJO66032.1    KP074189    KP074190    AJO66023.1    KP074297    AJO66131.1    KP074287    AJO66121.1    KP074205    AJO66039.1    KP074272    AJO66106.1    KP074243    AJO66077.1    KP074204    AJO66038.1    KP074271    AJO66105.1    KP074206    AJO66040.1    KP074257    AJO66091.1    KP074259    AJO66093.1    KP074267    AJO66101.1    KP074200    AJO66034.1    KP074263    AJO66097.1    KP074246    AJO66080.1    KP074285    AJO66119.1    KP074256    AJO66090.1    KP074258    AJO66092.1    KP074270    AJO66104.1    KP074262    AJO66096.1    KP074291    KP074292    AJO66125.1    KP074289    KP074290    AJO66124.1    KP074249    KP074250    KP074251    AJO66084.1    KP074264    KP074265    AJO66098.1    KP074213    KP074214    AJO66048.1    KP074242    KP074245    AJO66076.1    KP074238    KP074239    AJO66072.1    KP074286    KP074288    AJO66120.1    KP074215    KP074216    AJO66050.1    KP074260    KP074261    AJO66095.1    KP074273    KP074274    AJO66108.1    KP074225    KP074226    AJO66060.1    GAIX01003343    JAA89217.1    JTDY01001172    KOB74659.1    KP074183    AJO66017.1    KP074186    AJO66020.1    KP074294    AJO66128.1    KP074295    AJO66129.1    KP074247    AJO66081.1    KP074222    AJO66056.1    KP074252    KP074253    AJO66086.1    KP074218    KP074219    KP074220    AJO66054.1    KP074240    AJO66074.1    KP074224    AJO66058.1    KP074276    AJO66110.1    KP074179    AJO66013.1    KP074269    AJO66103.1    NWSH01003030    PCG67080.1    ODYU01008823    SOQ52766.1    KP074181    AJO66015.1    GDQN01008075    GDQN01005056    JAT82979.1    JAT85998.1    KP074221    AJO66055.1    JN174280    JN174281    JN174282    JN174283    JN174284    JN174285    JN174287    JN174288    JN174289    JN174291    JN174292    JN174293    JN174294    AEO01858.1    AEO01859.1    AEO01860.1    AEO01861.1    AEO01862.1    AEO01863.1    AEO01865.1    AEO01866.1    AEO01867.1    AEO01869.1    AEO01870.1    AEO01871.1    AEO01872.1    JN174261    JN174262    JN174263    JN174265    JN174266    JN174267    JN174268    JN174270    JN174271    JN174272    JN174273    JN174274    JN174275    JN174276    JN174277    JN174278    JN174279    AEO01839.1    AEO01840.1    AEO01841.1    AEO01843.1    AEO01844.1    AEO01845.1    AEO01846.1    AEO01848.1    AEO01849.1    AEO01850.1    AEO01851.1    AEO01852.1    AEO01853.1    AEO01854.1    AEO01855.1    AEO01856.1    AEO01857.1    JN174259    JN174260    AEO01837.1    AEO01838.1    KP074187    AJO66021.1    KP074232    AJO66066.1    JN174264    AEO01842.1    JN174290    AEO01868.1    JN174269    AEO01847.1    JN174286    AEO01864.1    KP074184    AJO66018.1    RSAL01000021    RVE52506.1    KP074193    AJO66027.1    KP074212    AJO66046.1    KP074199    AJO66033.1    KP074180    AJO66014.1    KP074191    AJO66025.1    KP074280    AJO66114.1    KP074275    AJO66109.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000037510    UP000218220    UP000283053    + More

PRIDE

Q2F630   

Pfam

PF00137   ATP-synt_C

Interpro

IPR002379   ATPase_proteolipid_c-like_dom        + More
IPR000245   ATPase_proteolipid_csu       
IPR035921   F/V-ATP_Csub_sf       

SUPFAM

SSF81333   SSF81333       

ProteinModelPortal

Q2F630   A0A0N0PBL6   A0A194Q852   A0A0C5DCC5   A0A0C5DGH6   A0A0C5DBS7   + More
A0A0C5DCF6   A0A0C5DU88   A0A0C5DBW0   A0A0C5D7T1   A0A0C5DUC0   A0A0C5DBU1   A0A0C5D7R7   A0A0C5D7R1   A0A0C5DBT1   A0A0C5D7S5   A0A0C5DCF3   A0A0C5DU86   A0A0C5DGJ6   A0A0C5DGJ7   A0A0C5DBT3   A0A0C5DU73   A0A0C5DCE0   A0A0C5DGM6   A0A0C5D7W4   A0A0C5DU61   A0A0C5DCD2   A0A0C5D7Q3   A0A0C5DBX3   A0A0C5DBR5   A0A0C5DGH5   A0A0C5D7X7   A0A0C5D7W9   A0A0C5DCD8   A0A0C5D7V7   A0A0C5DBT9   A0A0C5DGI3   A0A0C5DUB3   A0A0C5DU68   A0A0C5D7U6   A0A0C5DGL3   A0A0C5D7V3   A0A0C5DCD4   A0A0C5DBV1   A0A0C5DU94   A0A0C5DCJ3   A0A0C5DUA2   A0A0C5DBU8   A0A0C5DCI0   A0A0C5D7U8   A0A0C5DUD0   A0A0C5DCJ7   A0A0C5DCG5   A0A0C5DGL5   A0A0C5DGI9   A0A0C5D7T6   A0A0C5DBT6   A0A0C5DUC5   A0A0C5DU76   A0A0C5DUA6   A0A0C5DGM0   A0A0C5DU83   S4PYG2   A0A0L7LH25   A0A0C5DBQ7   A0A0C5DU55   A0A0C5DGN3   A0A0C5DCK2   A0A0C5D7T9   A0A0C5D7S1   A0A0C5D7U2   A0A0C5DCE7   A0A0C5DCF9   A0A0C5DGJ4   A0A0C5DUB7   A0A0C5DGG7   A0A0C5DGL8   A0A2A4J6K8   A0A2H1WIH9   A0A0C5DU51   A0A1E1W7P6   A0A0C5DU79   G3K8G5   G3K8E0   G3K8D7   A0A0C5D7P6   A0A0C5D7S8   G3K8E2   G3K8G8   G3K8E7   G3K8G4   A0A0C5DGH1   A0A3S2NYT8   A0A0C5DBR1   A0A0C5D7R3   A0A0C5DGH9   A0A0C5DCC3   A0A0C5DU59   A0A0C5DCI8   A0A0C5DCI4  

PDB

6O7X     E-value=1.71748e-30,     Score=327

KEGG

692859    K03661 V-type H+-transporting ATPase 21kDa proteolipid subunit | (RefSeq) vacuolar ATP synthase 21 k

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04142    Lysosome - Bombyx mori (domestic silkworm)
04145    Phagosome - Bombyx mori (domestic silkworm)

GO

GO:0015078   GO:0033179   GO:0016021   GO:0015991   GO:0006811   GO:0033177   GO:0006520   GO:0006508   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

Length:

205

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

117.1575

Exp number, first 60 AAs:

36.0591

Total prob of N-in:

0.97812

POSSIBLE N-term signal

sequence

inside

1  -  2

TMhelix

3  -  25

outside

26  -  44

TMhelix

45  -  67

inside

68  -  87

TMhelix

88  -  110

outside

111  -  129

TMhelix

130  -  163

inside

164  -  174

TMhelix

175  -  197

outside

198  -  205

 

 

Pi

197.217926

Theta

184.451069

Tajima's D

-1.188017

CLR

165.088283

CSRT

0.106394680265987

Interpretation

Uncertain