Gene

KWMTBOMO12928  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000469

Annotation

PREDICTED:_IST1_homolog_isoform_X2_[Papilio_polytes]

Location

Bomo_Chr22(-):4460922-4465439      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.183

CDS

ATGTTTTCGACAAATCCAAATTACACCAAACTCAAAACCCATTTGAGATTAGCGATAAACCGTCTAAAATTATTGGAGAAGAAGAAAACGGAATTAGCGCAGAAATCACGGAAAGAGATTGCTGAATACATAGCTTCAGGTAAAAGTGAACGTGCCAAAATAAGAGTGGAGCACATAATAAGAGAGGACTACATGGTAGAGGCTATGGAAATAGTAGAAATGTACTGTGACTTGATACTAGCTAGGTTTGGTCTTGTCACTCAGATGAAGGAACTCGATGAAGGTCTTGCTGAAGCTATATCCACTCTGATATGGGTAGCTCCTAGGATGCACACAGATGTACAAGAATTAAAAATAATATCTGACTTGCTCACTGCAAAATATGGAAAGGTATATGCTGATGCATGTAGAGGCGAGAATGTGAACACAATAAGTGACAAATTGAAGCACAAAATGTCTGTGCACAGTCCACCTAAAATATTAGTTGAGAAATATCTCATTGAAATTGCTAAGAATTACAATGTTGAGTACACCCCTGATGAACAAGTTATGAGGGCAGAAGAGGGTCATGATGCGCTACTGATAGATGTAAATGGACCTCCAATGCCTCCAGGCTTCATTGGTTATCCTCCACAACCAACAATGCAGATGCCTAATCTACCACCTCCAACTGTACAACCCTTTACCTATCCGACTGAAGCATCTGGTGGAAAAGCGGGTGGCTTCATAGCAACTCCACCTGCAAGTTATGGAGTTCCGAACCAGCCTCCTATCGGGTACGCCATGCCCCCTGGGACAGACTCTAAGAATTTTAGCAATAGTTTTCTACAGGAGGAAATGAGCAATTTACCACCCGCTTATGACAGCATCCATCACGATTTGCCTGCCCACGTGCCCACACCCCAGCCGAGGTCAAGGGCGCCGCCATCGAACTATTTCCCGGAACTGCCTGAGCTTCCCTCTGTGCCGTCCGACTTGGTTCTACCCTCAGTCCCAAACAGCAACAACTCGAACACTTCCAACAACGCCGCGAACGCTCCTGGTCCCTCTGATGAGATCGACTTCGATGATCTGAACCGGCGGTTTGAAGAGTTGAAGAAGAAAAAGTAA

Protein

MFSTNPNYTKLKTHLRLAINRLKLLEKKKTELAQKSRKEIAEYIASGKSERAKIRVEHIIREDYMVEAMEIVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISDLLTAKYGKVYADACRGENVNTISDKLKHKMSVHSPPKILVEKYLIEIAKNYNVEYTPDEQVMRAEEGHDALLIDVNGPPMPPGFIGYPPQPTMQMPNLPPPTVQPFTYPTEASGGKAGGFIATPPASYGVPNQPPIGYAMPPGTDSKNFSNSFLQEEMSNLPPAYDSIHHDLPAHVPTPQPRSRAPPSNYFPELPELPSVPSDLVLPSVPNSNNSNTSNNAANAPGPSDEIDFDDLNRRFEELKKKK

Uniprot

H9IT89   A0A1E1WRQ0   A0A212EUG0   A0A194QDP0   A0A0N0PBE0   A0A0L7LH30   + More
S4NXL5   A0A1W4X2X1   A0A154PID8   A0A2A4ISB2   A0A0L7RGS7   A0A2A3ERV2   A0A088AQG0   A0A2J7R9E2   A0A2J7R9E6   A0A1L8E5N7   A0A232F0S3   K7IUS1   A0A1L8E5F6   E2A9H0   A0A1Y1M5T1   A0A1Y1M866   A0A026WF22   E2BQI6   A0A158NXT9   A0A310SLQ7   A0A151I498   E9IQP2   A0A151JMD1   J3JYW9   A0A1B0CMC0   A0A195FX95   F4WLU5   U4UIE7   A0A151WIR7   U5EYT4   A0A1Q3FEA6   A0A2P8XX20   A0A0T6BGH6   M9PES8   V5GR71   E0VRR1   V5H1D2   M9PEC1   A0A0A9Z8M4   A0A0B8RW78   A0A336K5L5   Q9VRY6   N6UE21   A0A0Q9XBL9   M9PEJ2   A0A084W2S2   D6WJC2   A0A0Q9XBY4   T1IXH0   A0A1I8MYT7   A0A0Q9XLP6   B4KZL2   A0A1B0BQ78   T1PLI8   A0A1I8MYT1   W8BR77   A0A1A9Y9Z1   A0A0M4EEW6   W8BX36   A0A069DSP6   M9PHL4   A0A1I8QBZ7   A0A1I8QC00   D3TML3   A0A224XR52   W8C3H5   A0A1I8MYT0   A0A1I8MYS8   A0A0P4VMR8   R4G8R3   A0A1A9VMU1   B4J3G8   A0A0P5J253   A0A3P8YPJ3   A0A3P8YPF7   A0A0Q9WS35   A0A1I8QC18   B4HUX8   A0A1I8QC43   A0A1A9Z8V2   A0A2D0RSD3   A0A1L8EDW0   A0A0Q9X270   A0A0P5IWS5   A0A1B0G3W3   A0A3B3S8X8   A0A0P5NAW7   A0A0P4WV71   A0A0Q9XBF6   A0A0P5E0X1   A0A1A9WCV3   A0A0N8AQ82  

Pubmed

19121390    22118469    26354079    26227816    23622113    28648823    + More
20075255    20798317    28004739    24508170    30249741    21347285    21282665    22516182    21719571    23537049    29403074    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    20566863    25401762    26823975    26109357    26109356    17994087    24438588    18362917    19820115    25315136    24495485    26334808    20353571    27129103    25069045    29240929   

EMBL

BABH01013513    GDQN01001386    JAT89668.1    AGBW02012392    OWR45130.1    KQ459324    + More
KPJ01571.1    KQ460968    KPJ10228.1    JTDY01001172    KOB74664.1    GAIX01014140    JAA78420.1    KQ434905    KZC11254.1    NWSH01008294    PCG62621.1    KQ414592    KOC70182.1    KZ288191    PBC34437.1    NEVH01006591    PNF37460.1    PNF37459.1    GFDF01000098    JAV13986.1    NNAY01001398    OXU24123.1    AAZX01005919    GFDF01000097    JAV13987.1    GL437878    EFN69918.1    GEZM01039773    JAV81209.1    GEZM01039774    JAV81208.1    KK107238    QOIP01000007    EZA54715.1    RLU20208.1    GL449769    EFN82044.1    ADTU01003529    ADTU01003530    KQ761155    OAD58129.1    KQ976462    KYM84639.1    GL764874    EFZ17114.1    KQ978931    KYN27471.1    BT128450    AEE63407.1    AJWK01018559    KQ981204    KYN44937.1    GL888216    EGI64827.1    KB632335    ERL92792.1    KQ983089    KYQ47690.1    GANO01000137    JAB59734.1    GFDL01009159    JAV25886.1    PYGN01001222    PSN36537.1    LJIG01000657    KRT86283.1    AE014296    AGB94179.1    GALX01001817    JAB66649.1    DS235494    EEB16067.1    GALX01001818    JAB66648.1    AGB94178.1    GBHO01005469    GDHC01017091    JAG38135.1    JAQ01538.1    GBRD01016951    JAG48876.1    UFQS01000063    UFQT01000063    SSW98868.1    SSX19254.1    AY069431    AAF50644.1    AAL39576.1    APGK01026301    KB740624    ENN79960.1    CH933809    KRG05852.1    AGB94180.1    ATLV01019689    KE525277    KFB44516.1    KQ971343    EFA04455.2    KRG05853.1    JH431647    KRG05854.1    EDW17939.1    JXJN01018483    KA649574    AFP64203.1    GAMC01002745    JAC03811.1    CP012525    ALC44396.1    GAMC01002743    JAC03813.1    GBGD01001939    JAC86950.1    AGB94181.1    EZ422665    ADD18941.1    GFTR01005394    JAW11032.1    GAMC01002742    JAC03814.1    GDKW01000118    JAI56477.1    ACPB03008132    GAHY01000522    JAA76988.1    CH916366    EDV96170.1    GDIQ01207966    JAK43759.1    CH964062    KRF98929.1    CH480817    EDW50749.1    GFDG01001955    JAV16844.1    KRF98930.1    GDIQ01206665    JAK45060.1    CCAG010020666    GDIQ01148284    GDIP01065067    JAL03442.1    JAM38648.1    GDIP01254724    JAI68677.1    KRG05855.1    GDIP01149653    GDIQ01207967    JAJ73749.1    JAK43758.1    GDIQ01253603    JAJ98121.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000037510    UP000192223    + More
UP000076502    UP000218220    UP000053825    UP000242457    UP000005203    UP000235965    UP000215335    UP000002358    UP000000311    UP000053097    UP000279307    UP000008237    UP000005205    UP000078540    UP000078492    UP000092461    UP000078541    UP000007755    UP000030742    UP000075809    UP000245037    UP000000803    UP000009046    UP000019118    UP000009192    UP000030765    UP000007266    UP000095301    UP000092460    UP000092443    UP000092553    UP000095300    UP000015103    UP000078200    UP000001070    UP000265140    UP000007798    UP000001292    UP000092445    UP000221080    UP000092444    UP000261540    UP000091820   

PRIDE

H9IT89    M9PES8    M9PEC1    Q9VRY6   

Pfam

PF03398   Ist1

Interpro

IPR005061   Ist1        + More
IPR042277   IST1-like       
IPR018247   EF_Hand_1_Ca_BS       

Gene 3D

1.20.1260.60    

ProteinModelPortal

H9IT89   A0A1E1WRQ0   A0A212EUG0   A0A194QDP0   A0A0N0PBE0   A0A0L7LH30   + More
S4NXL5   A0A1W4X2X1   A0A154PID8   A0A2A4ISB2   A0A0L7RGS7   A0A2A3ERV2   A0A088AQG0   A0A2J7R9E2   A0A2J7R9E6   A0A1L8E5N7   A0A232F0S3   K7IUS1   A0A1L8E5F6   E2A9H0   A0A1Y1M5T1   A0A1Y1M866   A0A026WF22   E2BQI6   A0A158NXT9   A0A310SLQ7   A0A151I498   E9IQP2   A0A151JMD1   J3JYW9   A0A1B0CMC0   A0A195FX95   F4WLU5   U4UIE7   A0A151WIR7   U5EYT4   A0A1Q3FEA6   A0A2P8XX20   A0A0T6BGH6   M9PES8   V5GR71   E0VRR1   V5H1D2   M9PEC1   A0A0A9Z8M4   A0A0B8RW78   A0A336K5L5   Q9VRY6   N6UE21   A0A0Q9XBL9   M9PEJ2   A0A084W2S2   D6WJC2   A0A0Q9XBY4   T1IXH0   A0A1I8MYT7   A0A0Q9XLP6   B4KZL2   A0A1B0BQ78   T1PLI8   A0A1I8MYT1   W8BR77   A0A1A9Y9Z1   A0A0M4EEW6   W8BX36   A0A069DSP6   M9PHL4   A0A1I8QBZ7   A0A1I8QC00   D3TML3   A0A224XR52   W8C3H5   A0A1I8MYT0   A0A1I8MYS8   A0A0P4VMR8   R4G8R3   A0A1A9VMU1   B4J3G8   A0A0P5J253   A0A3P8YPJ3   A0A3P8YPF7   A0A0Q9WS35   A0A1I8QC18   B4HUX8   A0A1I8QC43   A0A1A9Z8V2   A0A2D0RSD3   A0A1L8EDW0   A0A0Q9X270   A0A0P5IWS5   A0A1B0G3W3   A0A3B3S8X8   A0A0P5NAW7   A0A0P4WV71   A0A0Q9XBF6   A0A0P5E0X1   A0A1A9WCV3   A0A0N8AQ82  

PDB

6E8G     E-value=2.12767e-65,     Score=632

KEGG

101746678    K19476 vacuolar protein sorting-associated protein IST1 | (RefSeq) IST1 homolog

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0015031   GO:0005768   GO:0032509   GO:0008104   GO:0007032   GO:0048675   GO:0008270   GO:0004046   GO:0005737   GO:0006520   GO:0006508   GO:0008237   GO:0008152   GO:0016491   GO:0015930  

PANTHER

PTHR12161  

Length:

369

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01371

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04713

outside

1  -  369

 

 

Pi

259.611383

Theta

185.4449

Tajima's D

1.20715

CLR

0.294069

CSRT

0.712914354282286

Interpretation

Uncertain