SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12918
Pre Gene Modal
BGIBMGA000223
Annotation
PREDICTED:_putative_sugar_transporter_protein_5_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.916
 

Sequence

CDS
ATGACCGATAGCTTAGAACCAAAATTATTCTACCATTCAAGCTTGAGCTCAGCCGGCACCCCGATCGGATGTATTCTAAGCGGCTACCTGATGGACTTAATTGGACGACGTCTCACTTTAATACTCACTGAAATACCTCTCATTCTCGGATGGATTCTGATTTCGACCTCTGTAAATATTCCCATGATGTATATAGGTAGGCTGCTGGTTGGCTTCGGTTCGGGTATGGTCGGCGCCCCAGCCAGGGTGTACACGTGCGAGGTATCACAACCACATCTCAGAGGCATGTTAGGAGCTCTGGCGTCTGTCGGAGTATCAACAGGAGTTTTGATAGTGTATGTAATAGGCAGTATAACTTCATGGAACATACTGGCAGGCGTTTGCGCATCAGTTCCTATGATGTCACTCCTGAGCATGCTGTTTTTACCGGAGACGCCGAATTTCCTTCTCCAGCAAGGTAGGAGAGAAAGGGCCGAGAGCTCATTGGCTAAATTGAGGGGTTCCACTTGTAATCTACAAGAAGAGATCGATAAAATGATTGCATTTAAAGAGAAGAACCATGTTGAGCCACTGAAGTCAGCGAGAGAAGTAATCAAAGCTTTATGTTCGCCTTCTGCTCTAAAGCCGTTTACGATCCTCGCCATTTACTTCTTCGTGTATCAATGGTGTGGCATCAACAGCATTACGTCATATAGTGTTCACATTTTCAAGGCGACGGGTAATGAGGCGCACAAAAATGCACTTACGATTGCGTTGGGCGTTGTCCGAGTCGCCTTCACGATTGTCGGGTGCATTATGTGCAGAAGATATGGACGGAGACCTCTCACTTTCGTCTCAGCCGCCGGCTGTGGGATCACGATGTTGATCCTTGGAGTGTACTTGTATTTCTTGGAAGGATGGAAACAAAACAATGTGACTCCATCGTACACTTGGATCCCAGTGGGCTGTATCTACCTTTTCATGGTCTTCTGCACTGTAGGATACCTAATCATTCCCTGGGTTATGATTGGTGAAGTTTATCCAACGCAGGTGCGCGGCATCATAGGCGGCATGACCACGTGCGTGGCGCACATGTCCGTGTTCTCGGTTGTGAAGACATACCCGTTGCTGGCGAAGCTTATTGGACAATACGGAATTTTCTCCTTGTATGGTGCCATGTCGCTTTTCGGCATACTTTACTTCTATTTCTTCTTACCGGAGACCAAAGGTAAAAACTTGCAAGACATCGAAGACTACTTCAGCGGTAGAACGAAAACTCTCAACAAAAAGAATAGCATTCAGACTGCCGCGTGA
Protein
MTDSLEPKLFYHSSLSSAGTPIGCILSGYLMDLIGRRLTLILTEIPLILGWILISTSVNIPMMYIGRLLVGFGSGMVGAPARVYTCEVSQPHLRGMLGALASVGVSTGVLIVYVIGSITSWNILAGVCASVPMMSLLSMLFLPETPNFLLQQGRRERAESSLAKLRGSTCNLQEEIDKMIAFKEKNHVEPLKSAREVIKALCSPSALKPFTILAIYFFVYQWCGINSITSYSVHIFKATGNEAHKNALTIALGVVRVAFTIVGCIMCRRYGRRPLTFVSAAGCGITMLILGVYLYFLEGWKQNNVTPSYTWIPVGCIYLFMVFCTVGYLIIPWVMIGEVYPTQVRGIIGGMTTCVAHMSVFSVVKTYPLLAKLIGQYGIFSLYGAMSLFGILYFYFFLPETKGKNLQDIEDYFSGRTKTLNKKNSIQTAA

Summary

Similarity
Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
EMBL
HM026604    ADG85768.1    BABH01013536    BABH01013537    BABH01013538    BABH01013539    + More
KQ459324    KPJ01582.1    NWSH01000610    PCG75342.1    RSAL01000021    RVE52520.1    ODYU01011266    SOQ56892.1    PYGN01002224    PSN31080.1    NEVH01005280    PNF39025.1    KK852548    KDR21599.1    PNF39024.1    DS231815    EDS35164.1    AJWK01013001    GFDL01016087    JAV18958.1    GFDL01016086    JAV18959.1    GFDF01009003    JAV05081.1    KQ434796    KZC05843.1    GALA01001196    JAA93656.1    ADMH02001104    ETN64096.1    AAAB01008807    EAA04222.4    APCN01000220    GGFL01003976    MBW68154.1    KQ977459    KYN02558.1    KQ762882    OAD55364.1    DS235870    EEB19443.1    GL440607    EFN65733.1    KQ982649    KYQ52971.1    GDUN01000911    JAN95008.1    GL888680    EGI58482.1    GBGD01001103    JAC87786.1    GDKW01002883    JAI53712.1    KQ976432    KYM87519.1    ADTU01007640    ADTU01007641    ACPB03016561    GBBI01002010    JAC16702.1    GFDL01005748    JAV29297.1    GFDL01005779    JAV29266.1    AXCN02000591    GL762354    EFZ21649.1    KQ414615    KOC68688.1    GL452320    EFN77491.1    KK107538    QOIP01000005    EZA49147.1    RLU22973.1    KQ981905    KYN33447.1    JR037229    AEY57650.1    GECL01002144    JAP03980.1    GFDF01009041    JAV05043.1    KK854045    PTY10206.1    AXCM01000560    KQ980713    KYN14397.1    AB550005    BAI83426.1    JR037228    AEY57649.1    JR037227    AEY57648.1    KZ288248    PBC31149.1    KQ435711    KOX79603.1    CVRI01000035    CRK92768.1    GBYB01012983    JAG82750.1    GBYB01011676    JAG81443.1    KQ460041    KPJ18370.1    UFQS01000264    UFQT01000264    SSX02182.1    SSX22559.1    CAQQ02197982    GEHC01001173    JAV46472.1    GGFJ01005860    MBW55001.1    ATLV01012364    KE524785    KFB36621.1    GECZ01007067    JAS62702.1    CH477907    EAT35151.1    GALA01001118    JAA93734.1    GAMD01001908    JAA99682.1    NNAY01002414    OXU21332.1    GECU01013815    JAS93891.1    GEBQ01006488    JAT33489.1    GEDC01021911    JAS15387.1    GECZ01015926    JAS53843.1    GFTR01006619    JAW09807.1    GEBQ01004113    JAT35864.1    GEBQ01024919    JAT15058.1    GEBQ01022526    JAT17451.1    GEBQ01010551    JAT29426.1    GEDC01005519    JAS31779.1    GEHC01001172    JAV46473.1    GEDC01012321    JAS24977.1    GECU01011731    JAS95975.1    GECU01024730    JAS82976.1    PNF39026.1    ABLF02029030    GGMR01016388    MBY29007.1    GFXV01002381    MBW14186.1   
Pfam
PF00083   Sugar_tr
Interpro
IPR036259   MFS_trans_sf        + More
IPR005829   Sugar_transporter_CS       
IPR020846   MFS_dom       
IPR003663   Sugar/inositol_transpt       
IPR005828   MFS_sugar_transport-like       
SUPFAM
SSF103473   SSF103473       
PDB
4LDS     E-value=1.81821e-35,     Score=374

Ontologies

Topology

Length:
430
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
214.49631
Exp number, first 60 AAs:
33.68419
Total prob of N-in:
0.22217
POSSIBLE N-term signal
sequence
outside
1  -  14
TMhelix
15  -  34
inside
35  -  46
TMhelix
47  -  69
outside
70  -  92
TMhelix
93  -  115
inside
116  -  119
TMhelix
120  -  142
outside
143  -  212
TMhelix
213  -  235
inside
236  -  247
TMhelix
248  -  270
outside
271  -  274
TMhelix
275  -  297
inside
298  -  309
TMhelix
310  -  332
outside
333  -  341
TMhelix
342  -  364
inside
365  -  376
TMhelix
377  -  399
outside
400  -  430
 
 

Population Genetic Test Statistics

Pi
239.343543
Theta
180.619184
Tajima's D
1.604078
CLR
0.299452
CSRT
0.808559572021399
Interpretation
Uncertain
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