SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12912
Pre Gene Modal
BGIBMGA000471
Annotation
PREDICTED:_spermatogenesis-associated_protein_6_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.473
 

Sequence

CDS
ATGCCGAAAATCATAGAATTAACAGTTGAAATAGAAATACAGAGGGTCTCATGTCCTGGTGTGTGGTTATGTCAAGATGGTAGAGTTTCATTATCAGTTTATGCACTTGGCACCAGTTATCAAACATGTATGCTGCCTCCTATTTTTCCTTTGACGTTCAAAGATGTGTTCTACTTTCGTAAAAGATTCCAAGAGACTTGTGCTTTGAACAATATTTGTTGTCTATTGAAGGACGAAACTATTTATTGCGAGCTGGTGCAGTGGTCAGAAGACTGTGTGTCCAATGAATGCACGATCCTCGCCCAGTACCTTGGCGCGCTGAATGATGTGCTTTTCCCGCCGAACATGTGCTCTAATGACGGAGTGGACCTGCTAATGAGAAGATCTAAAGATTTTCCTGGTATCCTGTCGCCGAAAATCGAGATAGCCACGAAAGTTCGCATAGACGAAGTGTGGAATCAGTCGTGCGTCGGTCACTTCAAGCAGACCCCCTGCCATTGCGATAACGACTCTACTAGACAGAAGACAGTTTGTCACTCCGCCAAATACCATAGAAAAAAGTGCAGCACCAGTCCTGGCAAGAGATCCGCATCCAGATCCAGATCGAGATCAAGATCTGGGGGATCCAGATCTTGTTGTAGCCTAACTCCTGTCGCACCGGAACTAACCAGCACATGCCGATGTCCCAAGACGCACAGCGAAACGGACAACATAAGCTCGGACAGAATACAAAAGTTAATATTAGAGAGTCGCTATATCGACCTCGAGCCCTGCAAGTCAACGCGCAGGGAGACGTTCAGCAAAACGAACGTCGCAGGTAAATTGACTCCGTGCGTCTGTGAAATATGTCGGCGATATCACGAGCTGTTTCACTCGGAGGGTAGTTTGAAAAGTTGA
Protein
MPKIIELTVEIEIQRVSCPGVWLCQDGRVSLSVYALGTSYQTCMLPPIFPLTFKDVFYFRKRFQETCALNNICCLLKDETIYCELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSNDGVDLLMRRSKDFPGILSPKIEIATKVRIDEVWNQSCVGHFKQTPCHCDNDSTRQKTVCHSAKYHRKKCSTSPGKRSASRSRSRSRSGGSRSCCSLTPVAPELTSTCRCPKTHSETDNISSDRIQKLILESRYIDLEPCKSTRRETFSKTNVAGKLTPCVCEICRRYHELFHSEGSLKS

Summary

Pfam
PF14909   SPATA6
Interpro
IPR032732   SPATA6_N       

Ontologies

GO

Topology

Length:
298
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.08184
Exp number, first 60 AAs:
1.08165
Total prob of N-in:
0.05309
outside
1  -  298
 
 

Population Genetic Test Statistics

Pi
237.845735
Theta
182.823407
Tajima's D
1.246787
CLR
0.448213
CSRT
0.725613719314034
Interpretation
Uncertain
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