Gene

KWMTBOMO12898

Pre Gene Modal

BGIBMGA012688

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_D_member_3_[Bombyx_mori]

Location

Bomo_Chr22(-):3703282-3731920      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.854

CDS

ATGGCACCGAATTTAAGTAAATTAACGCAACGGACAGACGTTAAAGTCGGTATTGCTGTCTCCGCAGCTCTTGGTGCTTGGATTATCCGGAACTCCTTTAAGTCAAGAAAATCAAGATATGACAAACCCGGCCGTCTTTCACCCGAAGAGCAGATTCAGTACATGATCAAAGAAAAAGACAAAAAGGGGCCAAAAGCACAAGTTGATGCTAGATTTTTAGCAGAATTTAAAACACTATGGAAGATTATGATGCCAGGCTGGTGGACCAAAGAAAGTGCCTTCATGTCGTTGATAGCCATCTCTCTAATATCCAGATCCATGTGTGATCTGTGGCTAATACAGCAGACTACTTTGATTGAAGGGTCAATTATCACAATGAACCACAAGGAGTTCAAGAGGCTGTTAATCCAGTTCTTCGGATCAATGCCACTGATTTCACTGGTGAACAACGTCTTGAAGTGGAGCATAGGTGAACTAAAGTTGAGGATAAGGACCAATTTATCATTGCACCTTTACAATGAATATATGAAAGGCTTCACATACTACCAAGTGACGAACTTAGACAATCGGATATCGAACGCTGATCAGCTCTTGACAACTGACATTGACAGGTTCTGTGAAACCGTCGTCGATCTATACAGCAACATCAGCAAACCGCTCCTGGATATCGCAATATACTTGTACAGGCTCACTGTGAACTTGGGTGCATCTACGCCCGGAATTATGGTGGCCTACCTCCTGGTATCGGGGGTGTTGCTAACACACTTGCGGAAACCAACAGCAAAAATGACAGTTCAAGAACAGAAACTCGAAGGTGAATATAGATACGTCAACTCCAGACTTATCACGAATTCAGAAGAAATTGCTTTCTATCAGGGTAATCACAGAGAGCGCTTAACAGTACTGGCCAGTTTCTACAAGCTGACGAGACATTTGAGAAACTTCTTAAACTTCAGAGTGTGCATGGGCTTTCTCGACAACATCATTGCTAAATACATCGCCATCACAGTAGGTTTCTATGCTGTGTCTAGGCCGTTCTTCGTCAAGGACCACAACTTATTGACTACGAGTACAGAAAACGATAGGTTTAAGCACTACTACACGTACGGTCGGATGTTGGTTAAGATGGCCGAGGGGATCGGGCGGATCGTGTTGTCTGGTCGCGAGCTGAGCAAGCTGGCCGGCCTCACGTCCCGGGTCACGCAGCTGCGCGTCGTGTTGGACGACATCAACAAGGGCAACTACTCGAGGACCATGGTCGACAAAACGTCACATAGTGCCAACGGCCCGCCCAGGCTGTTGGCTCCGGGTGCCGGTCGGATTATATACCAGGATAAGATCATAAAGTTCGATAAAGTACCGCTCGTCACTCCTAACGGTGATATCCTCATTGATGAGCTGTCCTTCGAAGTAAAGTCCGGTATCAACGTGCTGGTGTGCGGACCGAACGGCTGCGGCAAGTCGTCCATGTTCCGCCAGCTGGGCGAGCTGTGGCCGATATTCGGCGGCACCCTCACCAAACCCCCCAAGGGGAAGCTCTTCTACGTCCCTCAACGACCGTACATGACTCTGGGGACCTTGAGAGACCAGGTGTGGATCACTGGGTATTATGTCAGGCCGCGGAAACTATTTTGCGTTCTGGTTTTAAGTATACGACAGATGGTATTCTAG

Protein

MAPNLSKLTQRTDVKVGIAVSAALGAWIIRNSFKSRKSRYDKPGRLSPEEQIQYMIKEKDKKGPKAQVDARFLAEFKTLWKIMMPGWWTKESAFMSLIAISLISRSMCDLWLIQQTTLIEGSIITMNHKEFKRLLIQFFGSMPLISLVNNVLKWSIGELKLRIRTNLSLHLYNEYMKGFTYYQVTNLDNRISNADQLLTTDIDRFCETVVDLYSNISKPLLDIAIYLYRLTVNLGASTPGIMVAYLLVSGVLLTHLRKPTAKMTVQEQKLEGEYRYVNSRLITNSEEIAFYQGNHRERLTVLASFYKLTRHLRNFLNFRVCMGFLDNIIAKYIAITVGFYAVSRPFFVKDHNLLTTSTENDRFKHYYTYGRMLVKMAEGIGRIVLSGRELSKLAGLTSRVTQLRVVLDDINKGNYSRTMVDKTSHSANGPPRLLAPGAGRIIYQDKIIKFDKVPLVTPNGDILIDELSFEVKSGINVLVCGPNGCGKSSMFRQLGELWPIFGGTLTKPPKGKLFYVPQRPYMTLGTLRDQVWITGYYVRPRKLFCVLVLSIRQMVF

Uniprot

A0A2H4KAW9   A0A2A4JBK5   I6R2H4   A0A194Q881   A0A212FCV8   A0A0N1PH54   + More
A0A2H1W9M5   A0A1L8DEL0   A0A1B0CHG0   A0A0K8TQR6   A0A182Q389   A0A182N199   A0A182XDT6   Q7QFE4   A0A182LWX3   A0A182RMW8   A0A182PBJ7   A0A182JEY0   A0A182VGC9   A0A084VLU5   A0A2C9GQ54   A0A182W5H1   A0A1Q3FY75   U5EW09   A0A182FJR2   A0A3R5VSH1   T1DPU3   A0A2M4ABA7   A0A2M4BGI3   A0A2J7PN01   W5J815   A0A2M3Z450   A0A0A1WHF2   A0A0K8V6M7   A0A0K8VF60   A0A034VMR6   A0A0L0CIY7   A0A067RKH0   Q17GS0   A0A023EXI0   A0A1B6K9J3   A0A158V1A7   A0A026WHA0   W8C0L7   A0A2S2PYE9   J9K006   Q9VWC8   A0A1J1HUR6   E0VME4   B4GUZ5   Q29GU5   A0A3B0K0J0   B4JLP6   A0A2H8TFB6   A0A1L8DEI4   T1PG68   A0A1I8Q053   A0A0J7KHM5   E2AJU7   A0A2J7PN02   A0A1B6CD70   A0A1E1WPE4   A0A0L7R0L7   A0A151IVQ2   A0A1B0G4I5   A0A1W4VVI0   A0A158NN22   A0A195C476   A0A151JWH5   B4I7C1   B3NWD7   M9PF96   B4PYZ9   A0A151WTB0   A0A232F2Y5   A0A154PHU1   F4X7G2   A0A0A9X892   A0A1Y1KY98   B4NC15   B3MQL9   B4MEH7   A0A195BUR4   A0A0P4VKD9   A0A069DW28   B4L1S7   A0A0T6AZH3   A0A023F550   A0A2M4BIL3   A0A224XL97   A0A139WC26   A0A0M4ESZ1   A0A087ZY59   B4R7T1   A0A0P6I402   A0A0P5XJ08   A0A0K8T2L4   A0A0U9HSH9   A0A0P5UHI2  

Pubmed

26354079    22118469    26369729    12364791    14747013    17210077    + More
24438588    20920257    23761445    25830018    25348373    29121518    26108605    24845553    17510324    24945155    26483478    24508170    30249741    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20566863    17994087    15632085    23185243    25315136    20798317    21347285    17550304    28648823    21719571    25401762    28004739    18057021    27129103    26334808    25474469    18362917    19820115   

EMBL

KY484782    ASS36024.1    NWSH01002087    PCG69229.1    JQ653041    AFM38214.1    + More
KQ459324    KPJ01599.1    AGBW02009136    OWR51574.1    KQ460041    KPJ18353.1    ODYU01007205    SOQ49781.1    GFDF01009203    JAV04881.1    AJWK01012335    GDAI01000901    JAI16702.1    AXCN02001237    AAAB01008846    EAA06513.2    AXCM01004309    ATLV01014558    KE524974    KFB38939.1    APCN01001313    GFDL01002511    JAV32534.1    GANO01001648    JAB58223.1    MH172504    QAA95911.1    GAMD01003034    JAA98556.1    GGFK01004719    MBW38040.1    GGFJ01003029    MBW52170.1    NEVH01023960    PNF17697.1    ADMH02001973    ETN60116.1    GGFM01002538    MBW23289.1    GBXI01016347    GBXI01013124    GBXI01009750    GBXI01003010    JAC97944.1    JAD01168.1    JAD04542.1    JAD11282.1    GDHF01017727    JAI34587.1    GDHF01014730    JAI37584.1    KY849633    GAKP01015862    GAKP01015861    ATY74514.1    JAC43090.1    JRES01000333    KNC32220.1    KK852572    KDR21095.1    CH477256    EAT45867.1    JXUM01043023    JXUM01043024    JXUM01043025    JXUM01043026    GAPW01000444    JAC13154.1    GEBQ01031859    JAT08118.1    KF828790    AIN44107.1    KK107249    QOIP01000013    EZA54449.1    RLU15455.1    GAMC01007379    JAB99176.1    GGMS01001220    MBY70423.1    ABLF02032533    AE014298    AY118902    AAF49018.2    AAM50762.1    AGB95571.1    AGB95573.1    CVRI01000020    CRK91108.1    DS235307    EEB14549.1    CH479192    EDW26532.1    CH379064    EAL32014.1    KRT06772.1    OUUW01000003    SPP78531.1    CH916371    EDV91657.1    GFXV01000969    MBW12774.1    GFDF01009297    JAV04787.1    KA647135    AFP61764.1    LBMM01007478    KMQ89711.1    GL440100    EFN66263.1    PNF17696.1    GEDC01025924    JAS11374.1    GDQN01002192    JAT88862.1    KQ414670    KOC64399.1    KQ980890    KYN11780.1    CCAG010020456    ADTU01020940    KQ978344    KYM94973.1    KQ981645    KYN38671.1    CH480823    EDW56219.1    CH954180    EDV46757.1    AGB95572.1    CM000162    EDX02077.1    KQ982756    KYQ51162.1    NNAY01001188    OXU24813.1    KQ434912    KZC11382.1    GL888840    EGI57600.1    GBHO01026657    JAG16947.1    GEZM01070638    JAV66372.1    CH964239    EDW82374.1    CH902621    EDV44645.1    KPU81662.1    CH940664    EDW62952.1    KQ976406    KYM91662.1    GDKW01001060    JAI55535.1    GBGD01000769    JAC88120.1    CH933810    EDW06730.1    LJIG01022542    KRT80023.1    GBBI01002519    JAC16193.1    GGFJ01003660    MBW52801.1    GFTR01007627    JAW08799.1    KQ971371    KYB25470.1    CP012528    ALC48564.1    CM000366    EDX18414.1    GDIQ01017485    JAN77252.1    GDIP01071642    JAM32073.1    GBRD01006205    JAG59616.1    GARF01000026    JAC88916.1    GDIP01115142    JAL88572.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000053240    UP000092461    UP000075886    + More
UP000075884    UP000076407    UP000007062    UP000075883    UP000075900    UP000075885    UP000075880    UP000075903    UP000030765    UP000075840    UP000075920    UP000069272    UP000235965    UP000000673    UP000037069    UP000027135    UP000008820    UP000069940    UP000053097    UP000279307    UP000007819    UP000000803    UP000183832    UP000009046    UP000008744    UP000001819    UP000268350    UP000001070    UP000095301    UP000095300    UP000036403    UP000000311    UP000053825    UP000078492    UP000092444    UP000192221    UP000005205    UP000078542    UP000078541    UP000001292    UP000008711    UP000002282    UP000075809    UP000215335    UP000076502    UP000007755    UP000007798    UP000007801    UP000008792    UP000078540    UP000009192    UP000007266    UP000092553    UP000005203    UP000000304   

PRIDE

Q9VWC8    M9PF96    A0A087ZY59   

Pfam

PF06472   ABC_membrane_2        + More
PF00005   ABC_tran

Interpro

IPR003593   AAA+_ATPase        + More
IPR036640   ABC1_TM_sf       
IPR027417   P-loop_NTPase       
IPR031241   ABCD3       
IPR011527   ABC1_TM_dom       
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       

SUPFAM

SSF52540   SSF52540        + More
SSF90123   SSF90123       

Gene 3D

1.20.1560.10    

ProteinModelPortal

A0A2H4KAW9   A0A2A4JBK5   I6R2H4   A0A194Q881   A0A212FCV8   A0A0N1PH54   + More
A0A2H1W9M5   A0A1L8DEL0   A0A1B0CHG0   A0A0K8TQR6   A0A182Q389   A0A182N199   A0A182XDT6   Q7QFE4   A0A182LWX3   A0A182RMW8   A0A182PBJ7   A0A182JEY0   A0A182VGC9   A0A084VLU5   A0A2C9GQ54   A0A182W5H1   A0A1Q3FY75   U5EW09   A0A182FJR2   A0A3R5VSH1   T1DPU3   A0A2M4ABA7   A0A2M4BGI3   A0A2J7PN01   W5J815   A0A2M3Z450   A0A0A1WHF2   A0A0K8V6M7   A0A0K8VF60   A0A034VMR6   A0A0L0CIY7   A0A067RKH0   Q17GS0   A0A023EXI0   A0A1B6K9J3   A0A158V1A7   A0A026WHA0   W8C0L7   A0A2S2PYE9   J9K006   Q9VWC8   A0A1J1HUR6   E0VME4   B4GUZ5   Q29GU5   A0A3B0K0J0   B4JLP6   A0A2H8TFB6   A0A1L8DEI4   T1PG68   A0A1I8Q053   A0A0J7KHM5   E2AJU7   A0A2J7PN02   A0A1B6CD70   A0A1E1WPE4   A0A0L7R0L7   A0A151IVQ2   A0A1B0G4I5   A0A1W4VVI0   A0A158NN22   A0A195C476   A0A151JWH5   B4I7C1   B3NWD7   M9PF96   B4PYZ9   A0A151WTB0   A0A232F2Y5   A0A154PHU1   F4X7G2   A0A0A9X892   A0A1Y1KY98   B4NC15   B3MQL9   B4MEH7   A0A195BUR4   A0A0P4VKD9   A0A069DW28   B4L1S7   A0A0T6AZH3   A0A023F550   A0A2M4BIL3   A0A224XL97   A0A139WC26   A0A0M4ESZ1   A0A087ZY59   B4R7T1   A0A0P6I402   A0A0P5XJ08   A0A0K8T2L4   A0A0U9HSH9   A0A0P5UHI2  

PDB

3NHB     E-value=0.000306824,     Score=106

KEGG

101743534    K05677 ATP-binding cassette, subfamily D (ALD), member 3 | (RefSeq) ATP-binding cassette sub-family

PATHWAY

02010    ABC transporters - Bombyx mori (domestic silkworm)
04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0042626   GO:0005524   GO:0005777   GO:0042803   GO:0015910   GO:0016021   GO:0005778   GO:0008559   GO:0006810   GO:0016040   GO:0045181   GO:0050660   GO:0008152   GO:0016491   GO:0015930   GO:0055085  

PANTHER

PTHR11384:SF34  

Length:

556

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

65.4303400000002

Exp number, first 60 AAs:

7.15769

Total prob of N-in:

0.24671

outside

1  -  230

TMhelix

231  -  253

inside

254  -  314

TMhelix

315  -  337

outside

338  -  556

 

 

Pi

181.009567

Theta

169.074236

Tajima's D

0.152274

CLR

0.565859

CSRT

0.415129243537823

Interpretation

Uncertain