Gene

KWMTBOMO12897

Pre Gene Modal

BGIBMGA012688

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_D_member_3_[Bombyx_mori]

Location

Bomo_Chr22(-):3699842-3701250      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.559

CDS

ATGTGTTGTGTGTTACAAAGCGTCGTGTCTCCGCAGATGGCGCGTCTGTTCTACCACGAGCCGCAGTTCGCCATACTGGACGAGTGCACCAGCGCCGTGTCCGTGGACGTCGAGGGACAGATGTACCAGTACTGCAGAGAGATGGGCATATCGTTGTTCACCGTCTCGCACCGCAAGTCGCTGTGGAAGCACCACGACCACTACCTACAGATGGACGGCCGCGGCGGATACGTCTTCGAAGAGATCGACGCCGAGACGCAAGAGTTCGGATCGTGA

Protein

MCCVLQSVVSPQMARLFYHEPQFAILDECTSAVSVDVEGQMYQYCREMGISLFTVSHRKSLWKHHDHYLQMDGRGGYVFEEIDAETQEFGS

Uniprot

H9JT26   A0A2A4JBK5   A0A2H4KAW9   A0A2H1V1J7   A0A212FCV8   A0A194Q881   + More
A0A0N1PH54   A0A2S2NDI2   I6R2H4   A0A2S2PYE9   J9K006   A0A1B6CD70   A0A2H8TFB6   A0A1B0D2P2   A0A1B6GDQ2   A0A2J7PN02   A0A2J7PN01   A0A069DW28   A0A0P4VKD9   T1HSY9   A0A0A9X892   A0A0K8T2L4   A0A2P8ZE04   A0A158V1A7   A0A1B0CHG0   E0VME4   A0A067RKH0   A0A224XL97   A0A1L8DEI4   A0A023F550   A0A1S3INU2   A0A1L8DEL0   R7THK1   B4MEH7   A0A1B6K9J3   A0A3Q0IPM6   A0A3R5VSH1   A0A3B0K0J0   B4GUZ5   Q29GU5   A0A0T6AZH3   A0A1W4VVI0   K1Q8P4   E9GYI6   B4NC15   A0A164NA34   A0A0P5E7X2   A0A0P4YHA3   A0A0P5K0L7   A0A0P5UHI2   A0A0C2FXW9   A0A0P5CUZ5   A0A0P5X7V0   A0A0P5RER7   A0A0K8TQR6   A0A0K0ETP1   A0A0P4WBF8   A0A368GGN6   A0A226NF42   B3NWD7   A0A0P6I402   B4L1S7   M9PF96   V4A4F8   A0A210R5K0   A0A0L8H1F1   B4R7T1   A0A1S4F361   B4PYZ9   B4I7C1   Q9VWC8   A0A0N4Z9I3   A0A0K8V6M7   A0A0A1WHF2   A0A034VMR6   A0A0K0F2P7   A0A0N5BC22   B0XAF4   B7PS95   Q17GS0   A0A023EXI0   A0A154PHU1   A0A090KQV0   A0A0B1T399   A0A0M4ESZ1   W8C0L7   B4JLP6   A0A1Q3FY75   A0A2U3Z2F3   T1FPE3   A0A183G9F9   A0A3P8C0Z3   V5IDR8   A0A0P4WQA9   U5EW09   F6WF19   A0A1I7XP70   A0A131Y3D1   A0A0P5KBV2   A0A2C9KSH8  

Pubmed

19121390    22118469    26354079    26334808    27129103    25401762    + More
29403074    20566863    24845553    25474469    23254933    17994087    15632085    23185243    22992520    21292972    26369729    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    28812685    17510324    17550304    26109357    26109356    25830018    25348373    29121518    24945155    26483478    24495485    25765539    12481130    15114417    23874975    15562597   

EMBL

BABH01030657    NWSH01002087    PCG69229.1    KY484782    ASS36024.1    ODYU01000045    + More
SOQ34154.1    AGBW02009136    OWR51574.1    KQ459324    KPJ01599.1    KQ460041    KPJ18353.1    GGMR01002576    MBY15195.1    JQ653041    AFM38214.1    GGMS01001220    MBY70423.1    ABLF02032533    GEDC01025924    JAS11374.1    GFXV01000969    MBW12774.1    AJVK01023035    AJVK01023036    GECZ01009228    JAS60541.1    NEVH01023960    PNF17696.1    PNF17697.1    GBGD01000769    JAC88120.1    GDKW01001060    JAI55535.1    ACPB03028244    GBHO01026657    JAG16947.1    GBRD01006205    JAG59616.1    PYGN01000085    PSN54737.1    KF828790    AIN44107.1    AJWK01012335    DS235307    EEB14549.1    KK852572    KDR21095.1    GFTR01007627    JAW08799.1    GFDF01009297    JAV04787.1    GBBI01002519    JAC16193.1    GFDF01009203    JAV04881.1    AMQN01013069    KB309937    ELT92932.1    CH940664    EDW62952.1    GEBQ01031859    JAT08118.1    MH172504    QAA95911.1    OUUW01000003    SPP78531.1    CH479192    EDW26532.1    CH379064    EAL32014.1    KRT06772.1    LJIG01022542    KRT80023.1    JH817672    EKC27729.1    GL732575    EFX75398.1    CH964239    EDW82374.1    LRGB01002864    KZS05773.1    GDIP01145837    JAJ77565.1    GDIP01227619    JAI95782.1    GDIQ01196449    JAK55276.1    GDIP01115142    JAL88572.1    KN746482    KIH51489.1    GDIP01181372    JAJ42030.1    GDIP01076733    JAM26982.1    GDIQ01102446    JAL49280.1    GDAI01000901    JAI16702.1    GDRN01071367    JAI63701.1    JOJR01000153    RCN43541.1    MCFN01000069    OXB66196.1    CH954180    EDV46757.1    GDIQ01017485    JAN77252.1    CH933810    EDW06730.1    AE014298    AGB95572.1    KB202752    ESO88146.1    NEDP02000216    OWF56323.1    KQ419574    KOF83106.1    CM000366    EDX18414.1    CM000162    EDX02077.1    CH480823    EDW56219.1    AY118902    AAF49018.2    AAM50762.1    AGB95571.1    AGB95573.1    GDHF01017727    JAI34587.1    GBXI01016347    GBXI01013124    GBXI01009750    GBXI01003010    JAC97944.1    JAD01168.1    JAD04542.1    JAD11282.1    KY849633    GAKP01015862    GAKP01015861    ATY74514.1    JAC43090.1    DS232580    EDS43651.1    ABJB010473601    ABJB010816429    ABJB011054105    ABJB011121982    DS777384    EEC09467.1    CH477256    EAT45867.1    JXUM01043023    JXUM01043024    JXUM01043025    JXUM01043026    GAPW01000444    JAC13154.1    KQ434912    KZC11382.1    LN609396    CEF59913.1    KN551882    KN551877    KHJ91676.1    KHJ91689.1    CP012528    ALC48564.1    GAMC01007379    JAB99176.1    CH916371    EDV91657.1    GFDL01002511    JAV32534.1    AMQM01000116    AMQM01000117    KB095811    ESO12250.1    UZAH01030776    VDP12104.1    GANP01011462    JAB73006.1    GDRN01071366    JAI63702.1    GANO01001648    JAB58223.1    GEFM01002778    JAP73018.1    GDIQ01192804    JAK58921.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000007819    + More
UP000092462    UP000235965    UP000015103    UP000245037    UP000092461    UP000009046    UP000027135    UP000085678    UP000014760    UP000008792    UP000079169    UP000268350    UP000008744    UP000001819    UP000192221    UP000005408    UP000000305    UP000007798    UP000076858    UP000035681    UP000252519    UP000198323    UP000008711    UP000009192    UP000000803    UP000030746    UP000242188    UP000053454    UP000000304    UP000002282    UP000001292    UP000038045    UP000035680    UP000046392    UP000002320    UP000001555    UP000008820    UP000069940    UP000076502    UP000092553    UP000001070    UP000245341    UP000015101    UP000050761    UP000008144    UP000095283    UP000076420   

PRIDE

H9JT26    K1Q8P4    M9PF96    Q9VWC8   

Pfam

PF00005   ABC_tran        + More
PF06472   ABC_membrane_2

Interpro

IPR011527   ABC1_TM_dom        + More
IPR031241   ABCD3       
IPR027417   P-loop_NTPase       
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR003593   AAA+_ATPase       
IPR036640   ABC1_TM_sf       
IPR005283   FA_transporter       

SUPFAM

SSF52540   SSF52540        + More
SSF90123   SSF90123       

Gene 3D

1.20.1560.10    

ProteinModelPortal

H9JT26   A0A2A4JBK5   A0A2H4KAW9   A0A2H1V1J7   A0A212FCV8   A0A194Q881   + More
A0A0N1PH54   A0A2S2NDI2   I6R2H4   A0A2S2PYE9   J9K006   A0A1B6CD70   A0A2H8TFB6   A0A1B0D2P2   A0A1B6GDQ2   A0A2J7PN02   A0A2J7PN01   A0A069DW28   A0A0P4VKD9   T1HSY9   A0A0A9X892   A0A0K8T2L4   A0A2P8ZE04   A0A158V1A7   A0A1B0CHG0   E0VME4   A0A067RKH0   A0A224XL97   A0A1L8DEI4   A0A023F550   A0A1S3INU2   A0A1L8DEL0   R7THK1   B4MEH7   A0A1B6K9J3   A0A3Q0IPM6   A0A3R5VSH1   A0A3B0K0J0   B4GUZ5   Q29GU5   A0A0T6AZH3   A0A1W4VVI0   K1Q8P4   E9GYI6   B4NC15   A0A164NA34   A0A0P5E7X2   A0A0P4YHA3   A0A0P5K0L7   A0A0P5UHI2   A0A0C2FXW9   A0A0P5CUZ5   A0A0P5X7V0   A0A0P5RER7   A0A0K8TQR6   A0A0K0ETP1   A0A0P4WBF8   A0A368GGN6   A0A226NF42   B3NWD7   A0A0P6I402   B4L1S7   M9PF96   V4A4F8   A0A210R5K0   A0A0L8H1F1   B4R7T1   A0A1S4F361   B4PYZ9   B4I7C1   Q9VWC8   A0A0N4Z9I3   A0A0K8V6M7   A0A0A1WHF2   A0A034VMR6   A0A0K0F2P7   A0A0N5BC22   B0XAF4   B7PS95   Q17GS0   A0A023EXI0   A0A154PHU1   A0A090KQV0   A0A0B1T399   A0A0M4ESZ1   W8C0L7   B4JLP6   A0A1Q3FY75   A0A2U3Z2F3   T1FPE3   A0A183G9F9   A0A3P8C0Z3   V5IDR8   A0A0P4WQA9   U5EW09   F6WF19   A0A1I7XP70   A0A131Y3D1   A0A0P5KBV2   A0A2C9KSH8  

PDB

3C4J     E-value=0.0105148,     Score=84

KEGG

101743534    K05677 ATP-binding cassette, subfamily D (ALD), member 3 | (RefSeq) ATP-binding cassette sub-family

GO

GO:0016021   GO:0042626   GO:0005524   GO:0005777   GO:0015910   GO:0042803   GO:0008559   GO:0005324   GO:0005778  

PANTHER

PTHR11384:SF34  

Length:

91

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000750000000000001

Exp number, first 60 AAs:

0.000740000000000001

Total prob of N-in:

0.24524

outside

1  -  91

 

 

Pi

134.821208

Theta

137.803941

Tajima's D

0.080736

CLR

0

CSRT

0.392380380980951

Interpretation

Uncertain